pycom15g01910

13-hydroxylupanine O-tigloyltransferase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
1096555 .. 1099195
2641 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1362 bp
ATGATAAAATCTCAAGAAGAACTTCCAAATTGTTACTACCCAACTCAGCCAATATTAATCCGCCCAAACTCCCCAACCCCAAAGCATTGCCTCCACCTCTCAAATCTCGACGACCAGAAGTTTCTCAGATTCTCCATCAAATATCTCTACCTTTTCAAAAAATCTGTCAGCTTAGAAACCCTAAAGCATGCCCTCTCTAAAGTCCTCGTTGGCTACTACCCATTGGCTGGGAGGTTGAGGACGAGCGCTGACCATGATCAGAAGCTCGAGGTTGACTGCAATGGAGAAGGTGCTGTATTTGCCGAGGCTTTCATGGACATCACTACTCAGGATTTTCTTGAACTTTCCAACAAGCCGAACAGGTCTTGGAGGAAACTCTTATACAGGGTGGAAGCCCTCAGTTTCTTGGATATCCCTCCTCTTGTTATTCAGGTTACAAATCTCCGTTGTGGGGGAATGATCATGTGTACAGCAATCAATCACTGTTTAAGCGACGGCATAGGCACATCTCAGTTCTTGCACGCGTGGGCCCACCTAACAGGCAAGCCAGATCTCGATCCACCAATCCAACCGATTCACTCTCGCCACGTGTTAAAATCACGTAGTCCCCCAAAGGCAACCTTCCCTCATCCTCAATTTACCCTAACAAGCAACAACGGCCACGTGGATATCACGAGCCTGCTCCAATCGCAGCCGCTCATCCCCACTTCCTTAACCTTCACCCACTCGGATATCCTTCACCTCAAGAGACAATGCGCACCCTCGCTAAAATGCAGCACCTTCGAAACCCTAGCATCTCACACATGGCGCTCCTGGATTAAATCATTGAATCTGCCACCCTCTCTCAACATCAAGCTCCTCTTCTCGGTGAACATACGCAAAACGTTAAACCCTCAAATCCCACAGGGCTACTACGGCAACGGGTTCGTGCTAGCATGCGCCGAAACCACCGTGAAGGATCTAGTCGGTGCTAACTTGCGCCACGGTGTTAATTTGGTTCAACAAGCTAAACAAGATATTAATGATGAGTATGTAAGGTCGATGATTGACTTATTGGAGGAGAAAACATTGAAGACGGATCTGGGCGCGAGTTTGGTTATATCGCAGTGGGCGAAGTTAGGGTTAGAGGAGTTGGATTTTGGAGAAGGGAAGCCATTGCATATGGGGCCTCTCACGAGTGATGTGTACTGCTTGTTTTTACCAGTTGTTGGAGATTTCGACTCTGTGAGAGTTCTTGTGTCCGTGCCCGAAAGCTTGGTTGAGAAATTTGAATATTACATGACAGAATTTTTTACTGCTGAAGAAATAAATGGAGATCATCGTGCTAATGGATTCCATGCAGAAGATCCAATGGAATATTAA

Protein Analysis

454

Amino Acids

51.06

Weight (kDa)

6.41

Isoelectric Point (pI)

36.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 19 - 426 1.1e-73 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014544)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G27620
fragaria_vesca FvH4_2g39380
malus_domestica MD08G1026100.v1.1 MD15G1022800.v1.1
prunus_persica Prupe.1G374800_v2.0.a1
pyrus_communis pycom08g02020 pycom15g01910
rosa_chinensis RchiOBHm_Chr6g0301621
rosa_laevigata RLG00000011238
rosa_multiflora Rmu_ssc0000452.1_g000013
rosa_roxburghii Rroxscaffold_7G00166590
rosa_rugosa Rorug06G0307400
rosa_samantha Rh6AG420200 Rh6BG426400 Rh6CG433200 Rh6DG419700
rosa_wichuraiana Rw6G036330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 757
AccB7I CCANNNNNTGG 2 cut(s) 227, 1208
AccBSI CCGCTC 1 cut(s) 697
AccII CGCG 2 cut(s) 524, 1088
AciI CCGC 2 cut(s) 61, 695
AclI AACGTT 1 cut(s) 884
AclWI GGATC 4 cut(s) 551, 966, 1086, 1340
AcoI YGGCCR 1 cut(s) 658
AcsI RAATTY 2 cut(s) 1265, 1286
AcuI CTGAAG 1 cut(s) 1320
AcvI CACGTG 2 cut(s) 589, 664
AfaI GTAC 2 cut(s) 469, 1187
AfeI AGCGCT 1 cut(s) 247
AfiI CCNNNNNNNGG 4 cut(s) 227, 451, 865, 1208
AflIII ACRYGT 2 cut(s) 522, 588
AgsI TTSAA 6 cut(s) 157, 341, 829, 1001, 1072, 1271
AjnI CCWGG 1 cut(s) 812
AluBI AGCT 5 cut(s) 171, 265, 856, 1007, 1254
AluI AGCT 5 cut(s) 171, 265, 856, 1007, 1254
Alw26I GTCTC 1 cut(s) 742
AlwI GGATC 4 cut(s) 551, 966, 1086, 1340
Ama87I CYCGRG 1 cut(s) 266
Aor51HI AGCGCT 1 cut(s) 247
AoxI GGCC 3 cut(s) 528, 658, 1166
ApaI GGGCCC 1 cut(s) 532
ApeKI GCWGC 2 cut(s) 691, 774
ApoI RAATTY 2 cut(s) 1265, 1286
ArsI GACNNNNNNTTYG 2 cut(s) 150, 182
AseI ATTAAT 2 cut(s) 56, 1020
Asp700I GAANNNNTTC 1 cut(s) 21
AspLEI GCGC 6 cut(s) 248, 758, 810, 941, 981, 1088
AspS9I GGNCC 3 cut(s) 528, 529, 1166
AsuHPI GGTGA 3 cut(s) 712, 731, 880
AsuII TTCGAA 1 cut(s) 783
AsuNHI GCTAGC 1 cut(s) 931
AvaI CYCGRG 1 cut(s) 266
BaeGI GKGCMC 2 cut(s) 532, 1248
BanII GRGCYC 1 cut(s) 532
BauI CACGAG 2 cut(s) 673, 1174
BbrPI CACGTG 2 cut(s) 589, 664
BbsI GAAGAC 1 cut(s) 1079
BbvI GCAGC 2 cut(s) 703, 786
BccI CCATC 1 cut(s) 143
BceAI ACGGC 3 cut(s) 511, 673, 931
BcgI CGANNNNNNTGC 4 cut(s) 763, 797, 907, 941
BciT130I CCWGG 1 cut(s) 814
BclI TGATCA 2 cut(s) 256, 459
BcoDI GTCTC 1 cut(s) 742
BfaI CTAG 3 cut(s) 791, 932, 962
BfoI RGCGCY 2 cut(s) 249, 811
BglII AGATCT 1 cut(s) 550
BisI GCNGC 3 cut(s) 692, 695, 775
BlsI GCNGC 3 cut(s) 693, 696, 776
Bme1390I CCNGG 1 cut(s) 814
BmeT110I CYCGRG 1 cut(s) 266
BmgT120I GGNCC 3 cut(s) 528, 529, 1166
BmiI GGNNCC 2 cut(s) 530, 1167
BmrFI CCNGG 1 cut(s) 814
BmsI GCATC 1 cut(s) 803
BmtI GCTAGC 1 cut(s) 935
BpiI GAAGAC 1 cut(s) 1079
Bpu14I TTCGAA 1 cut(s) 783
BpuEI CTTGAG 1 cut(s) 728
BsaAI YACGTR 3 cut(s) 589, 602, 664
BsaBI GATNNNNATC 1 cut(s) 555
BsaJI CCNNGG 2 cut(s) 303, 982
Bsc4I CCNNNNNNNGG 4 cut(s) 227, 451, 865, 1208
Bse1I ACTGG 1 cut(s) 1202
Bse3DI GCAATG 3 cut(s) 85, 286, 1154
Bse8I GATNNNNATC 1 cut(s) 555
BseBI CCWGG 1 cut(s) 814
BseDI CCNNGG 2 cut(s) 303, 982
BseGI GGATG 2 cut(s) 628, 699
BseJI GATNNNNATC 1 cut(s) 555
BseLI CCNNNNNNNGG 4 cut(s) 227, 451, 865, 1208
BseMI GCAATG 3 cut(s) 85, 286, 1154
BseMII CTCAG 5 cut(s) 59, 139, 341, 412, 524
BseNI ACTGG 1 cut(s) 1202
BseRI GAGGAG 4 cut(s) 408, 848, 1073, 1142
BseSI GKGCMC 2 cut(s) 532, 1248
BseXI GCAGC 2 cut(s) 703, 786
BseYI CCCAGC 1 cut(s) 227
Bsh1236I CGCG 2 cut(s) 524, 1088
BshFI GGCC 3 cut(s) 530, 660, 1168
BsiHKCI CYCGRG 1 cut(s) 266
BslFI GGGAC 1 cut(s) 591
BslI CCNNNNNNNGG 4 cut(s) 227, 451, 865, 1208
BsmAI GTCTC 1 cut(s) 742
BsmFI GGGAC 1 cut(s) 591
BsnI GGCC 3 cut(s) 530, 660, 1168
BsoBI CYCGRG 1 cut(s) 266
Bsp119I TTCGAA 1 cut(s) 783
Bsp120I GGGCCC 1 cut(s) 528
Bsp1286I GDGCHC 2 cut(s) 532, 1248
Bsp1407I TGTACA 1 cut(s) 467
Bsp143I GATC 8 cut(s) 256, 459, 550, 556, 958, 1078, 1315, 1345
BspACI CCGC 2 cut(s) 61, 695
BspANI GGCC 3 cut(s) 530, 660, 1168
BspCNI CTCAG 5 cut(s) 58, 138, 340, 411, 523
BspFNI CGCG 2 cut(s) 524, 1088
BspLI GGNNCC 2 cut(s) 530, 1167
BspOI GCTAGC 1 cut(s) 935
BspPI GGATC 4 cut(s) 551, 966, 1086, 1340
BspT104I TTCGAA 1 cut(s) 783
BsrBI CCGCTC 1 cut(s) 697
BsrDI GCAATG 3 cut(s) 85, 286, 1154
BsrGI TGTACA 1 cut(s) 467
BsrI ACTGG 1 cut(s) 1202
BssECI CCNNGG 2 cut(s) 303, 982
BssMI GATC 8 cut(s) 256, 459, 550, 556, 958, 1078, 1315, 1345
BssSI CACGAG 2 cut(s) 673, 1174
Bst2BI CACGAG 2 cut(s) 673, 1174
Bst2UI CCWGG 1 cut(s) 814
Bst4CI ACNGT 3 cut(s) 485, 952, 986
Bst6I CTCTTC 1 cut(s) 866
BstAUI TGTACA 1 cut(s) 467
BstBAI YACGTR 3 cut(s) 589, 602, 664
BstBI TTCGAA 1 cut(s) 783
BstC8I GCNNGC 6 cut(s) 189, 522, 545, 680, 933, 937
BstDEI CTNAG 6 cut(s) 45, 125, 172, 327, 398, 510
BstDSI CCRYGG 1 cut(s) 982
BstF5I GGATG 2 cut(s) 628, 699
BstFNI CGCG 2 cut(s) 524, 1088
BstH2I RGCGCY 2 cut(s) 249, 811
BstHHI GCGC 6 cut(s) 248, 758, 810, 941, 981, 1088
BstKTI GATC 8 cut(s) 259, 462, 553, 559, 961, 1081, 1318, 1348
BstMAI GTCTC 1 cut(s) 742
BstMBI GATC 8 cut(s) 256, 459, 550, 556, 958, 1078, 1315, 1345
BstMWI GCNNNNNNNGC 5 cut(s) 299, 657, 688, 915, 1165
BstNI CCWGG 1 cut(s) 814
BstNSI RCATGY 2 cut(s) 191, 939
BstSCI CCNGG 1 cut(s) 812
BstSLI GKGCMC 2 cut(s) 532, 1248
BstUI CGCG 2 cut(s) 524, 1088
BstV1I GCAGC 2 cut(s) 703, 786
BstV2I GAAGAC 1 cut(s) 1079
BstX2I RGATCY 4 cut(s) 550, 958, 1078, 1345
BstYI RGATCY 4 cut(s) 550, 958, 1078, 1345
BsuRI GGCC 3 cut(s) 530, 660, 1168
BtgI CCRYGG 1 cut(s) 982
BtsCI GGATG 2 cut(s) 628, 699
BtsI GCAGTG 1 cut(s) 1112
BtsIMutI CAGTG 2 cut(s) 481, 1112
Cac8I GCNNGC 6 cut(s) 189, 522, 545, 680, 933, 937
CfoI GCGC 6 cut(s) 248, 758, 810, 941, 981, 1088
Cfr13I GGNCC 3 cut(s) 528, 529, 1166
Csp6I GTAC 2 cut(s) 468, 1186
CviAII CATG 8 cut(s) 188, 254, 313, 463, 804, 936, 1279, 1337
CviQI GTAC 2 cut(s) 468, 1186
DdeI CTNAG 6 cut(s) 45, 125, 172, 327, 398, 510
DpnI GATC 8 cut(s) 258, 461, 552, 558, 960, 1080, 1317, 1347
DpnII GATC 8 cut(s) 256, 459, 550, 556, 958, 1078, 1315, 1345
EaeI YGGCCR 1 cut(s) 658
Eam1104I CTCTTC 1 cut(s) 866
EarI CTCTTC 1 cut(s) 866
EciI GGCGGA 1 cut(s) 50
Eco24I GRGCYC 1 cut(s) 532
Eco32I GATATC 3 cut(s) 412, 670, 733
Eco47III AGCGCT 1 cut(s) 247
Eco57I CTGAAG 1 cut(s) 1320
Eco72I CACGTG 2 cut(s) 589, 664
Eco88I CYCGRG 1 cut(s) 266
EcoO109I RGGNCCY 1 cut(s) 1166
EcoRII CCWGG 1 cut(s) 812
EcoRV GATATC 3 cut(s) 412, 670, 733
EcoT38I GRGCYC 1 cut(s) 532
FaeI CATG 8 cut(s) 191, 257, 316, 466, 807, 939, 1282, 1340
FalI AAGNNNNNCTT 5 cut(s) 38, 605, 637, 845, 877
FaqI GGGAC 1 cut(s) 591
FatI CATG 8 cut(s) 187, 253, 312, 462, 803, 935, 1278, 1336
FauNDI CATATG 1 cut(s) 1161
FbaI TGATCA 2 cut(s) 256, 459
Fnu4HI GCNGC 3 cut(s) 692, 695, 775
FokI GGATG 2 cut(s) 615, 686
FriOI GRGCYC 1 cut(s) 532
Fsp4HI GCNGC 3 cut(s) 692, 695, 775
FspAI RTGCGCAY 1 cut(s) 757
FspBI CTAG 3 cut(s) 791, 932, 962
FspI TGCGCA 1 cut(s) 757
GlaI GCGC 6 cut(s) 247, 757, 809, 940, 980, 1087
GluI GCNGC 3 cut(s) 692, 695, 775
GsaI CCCAGC 1 cut(s) 231
HaeII RGCGCY 2 cut(s) 249, 811
HaeIII GGCC 3 cut(s) 530, 660, 1168
HhaI GCGC 6 cut(s) 248, 758, 810, 941, 981, 1088
Hin1II CATG 8 cut(s) 191, 257, 316, 466, 807, 939, 1282, 1340
Hin6I GCGC 6 cut(s) 246, 756, 808, 939, 979, 1086
HinP1I GCGC 6 cut(s) 246, 756, 808, 939, 979, 1086
HincII GTYRAC 1 cut(s) 274
HindII GTYRAC 1 cut(s) 274
HindIII AAGCTT 1 cut(s) 1252
HinfI GANTC 5 cut(s) 129, 574, 829, 1220, 1332
HphI GGTGA 3 cut(s) 712, 731, 880
Hpy166II GTNNAC 4 cut(s) 274, 468, 871, 1186
Hpy188I TCNGA 3 cut(s) 128, 261, 730
Hpy188III TCNNGA 8 cut(s) 14, 107, 329, 338, 554, 673, 745, 1174
Hpy8I GTNNAC 4 cut(s) 274, 468, 871, 1186
Hpy99I CGWCG 2 cut(s) 113, 497
HpyAV CCTTC 7 cut(s) 281, 631, 727, 746, 790, 949, 1139
HpyCH4III ACNGT 3 cut(s) 485, 952, 986
HpyCH4IV ACGT 4 cut(s) 588, 601, 663, 884
HpyCH4V TGCA 5 cut(s) 279, 520, 774, 1159, 1340
HpyF10VI GCNNNNNNNGC 5 cut(s) 299, 657, 688, 915, 1165
HpyF3I CTNAG 6 cut(s) 45, 125, 172, 327, 398, 510
HpySE526I ACGT 4 cut(s) 588, 601, 663, 884
Hsp92II CATG 8 cut(s) 191, 257, 316, 466, 807, 939, 1282, 1340
HspAI GCGC 6 cut(s) 246, 756, 808, 939, 979, 1086
Ksp22I TGATCA 2 cut(s) 256, 459
Kzo9I GATC 8 cut(s) 256, 459, 550, 556, 958, 1078, 1315, 1345
LmnI GCTCC 3 cut(s) 687, 815, 861
Lsp1109I GCAGC 2 cut(s) 703, 786
LweI GCATC 1 cut(s) 803
MaeI CTAG 3 cut(s) 791, 932, 962
MaeII ACGT 4 cut(s) 588, 601, 663, 884
MaeIII GTNAC 2 cut(s) 32, 433
MalI GATC 8 cut(s) 258, 461, 552, 558, 960, 1080, 1317, 1347
MbiI CCGCTC 1 cut(s) 697
MboI GATC 8 cut(s) 256, 459, 550, 556, 958, 1078, 1315, 1345
MboII GAAGA 5 cut(s) 29, 853, 1084, 1313, 1355
MflI RGATCY 4 cut(s) 550, 958, 1078, 1345
MhlI GDGCHC 2 cut(s) 532, 1248
MluCI AATT 5 cut(s) 28, 635, 991, 1265, 1286
MluI ACGCGT 1 cut(s) 522
MlyI GAGTC 1 cut(s) 1214
MmeI TCCRAC 4 cut(s) 372, 592, 1113, 1189
MroXI GAANNNNTTC 1 cut(s) 21
MseI TTAA 9 cut(s) 56, 488, 593, 713, 819, 887, 990, 1020, 1360
MspR9I CCNGG 1 cut(s) 814
MvaI CCWGG 1 cut(s) 814
MvnI CGCG 2 cut(s) 524, 1088
MwoI GCNNNNNNNGC 5 cut(s) 299, 657, 688, 915, 1165
NdeI CATATG 1 cut(s) 1161
NdeII GATC 8 cut(s) 256, 459, 550, 556, 958, 1078, 1315, 1345
NheI GCTAGC 1 cut(s) 931
NlaIII CATG 8 cut(s) 191, 257, 316, 466, 807, 939, 1282, 1340
NlaIV GGNNCC 2 cut(s) 530, 1167
NmeAIII GCCGAG 1 cut(s) 328
NsbI TGCGCA 1 cut(s) 757
NspI RCATGY 2 cut(s) 191, 939
NspV TTCGAA 1 cut(s) 783
PaeI GCATGC 2 cut(s) 191, 939
PaeR7I CTCGAG 1 cut(s) 266
PcsI WCGNNNNNNNCGW 1 cut(s) 1109
PdmI GAANNNNTTC 1 cut(s) 21
PfeI GAWTC 4 cut(s) 129, 574, 829, 1332
PflMI CCANNNNNTGG 2 cut(s) 227, 1208
PfoI TCCNGGA 1 cut(s) 812
PkrI GCNGC 3 cut(s) 693, 696, 776
PleI GAGTC 1 cut(s) 1214
PmaCI CACGTG 2 cut(s) 589, 664
PmlI CACGTG 2 cut(s) 589, 664
PpsI GAGTC 1 cut(s) 1214
Ppu21I YACGTR 3 cut(s) 589, 602, 664
PshBI ATTAAT 2 cut(s) 56, 1020
Psp1406I AACGTT 1 cut(s) 884
Psp6I CCWGG 1 cut(s) 812
PspCI CACGTG 2 cut(s) 589, 664
PspFI CCCAGC 1 cut(s) 227
PspGI CCWGG 1 cut(s) 812
PspN4I GGNNCC 2 cut(s) 530, 1167
PspOMI GGGCCC 1 cut(s) 528
PspPI GGNCC 3 cut(s) 528, 529, 1166
PspXI VCTCGAGB 1 cut(s) 266
PsuI RGATCY 4 cut(s) 550, 958, 1078, 1345
RsaI GTAC 2 cut(s) 469, 1187
RsaNI GTAC 2 cut(s) 468, 1186
SaqAI TTAA 9 cut(s) 56, 488, 593, 713, 819, 887, 990, 1020, 1360
SatI GCNGC 3 cut(s) 692, 695, 775
Sau3AI GATC 8 cut(s) 256, 459, 550, 556, 958, 1078, 1315, 1345
Sau96I GGNCC 3 cut(s) 528, 529, 1166
SchI GAGTC 1 cut(s) 1214
ScrFI CCNGG 1 cut(s) 814
SduI GDGCHC 2 cut(s) 532, 1248
SfaNI GCATC 1 cut(s) 803
Sfr274I CTCGAG 1 cut(s) 266
SfuI TTCGAA 1 cut(s) 783
SlaI CTCGAG 1 cut(s) 266
SmlI CTYRAG 3 cut(s) 12, 266, 743
SmoI CTYRAG 3 cut(s) 12, 266, 743
SphI GCATGC 2 cut(s) 191, 939
Sse9I AATT 5 cut(s) 28, 635, 991, 1265, 1286
SsiI CCGC 2 cut(s) 61, 695
SspI AATATT 3 cut(s) 54, 1274, 1358
SspMI CTAG 3 cut(s) 791, 932, 962
StyD4I CCNGG 1 cut(s) 812
TaaI ACNGT 3 cut(s) 485, 952, 986
TaiI ACGT 4 cut(s) 591, 604, 666, 887
TaqI TCGA 6 cut(s) 108, 267, 555, 783, 1040, 1218
TasI AATT 5 cut(s) 28, 635, 991, 1265, 1286
TatI WGTACW 2 cut(s) 467, 1185
TauI GCSGC 1 cut(s) 697
TfiI GAWTC 4 cut(s) 129, 574, 829, 1332
Tru1I TTAA 9 cut(s) 56, 488, 593, 713, 819, 887, 990, 1020, 1360
Tru9I TTAA 9 cut(s) 56, 488, 593, 713, 819, 887, 990, 1020, 1360
TscAI CASTG 2 cut(s) 488, 1112
TseI GCWGC 2 cut(s) 691, 774
TspDTI ATGAA 1 cut(s) 301
TspGWI ACGGA 3 cut(s) 434, 1091, 1231
TspRI CASTG 2 cut(s) 488, 1112
Van91I CCANNNNNTGG 2 cut(s) 227, 1208
VspI ATTAAT 2 cut(s) 56, 1020
XapI RAATTY 2 cut(s) 1265, 1286
XceI RCATGY 2 cut(s) 191, 939
XhoI CTCGAG 1 cut(s) 266
XmnI GAANNNNTTC 1 cut(s) 21
XspI CTAG 3 cut(s) 791, 932, 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.