Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0014569

Physical Location & Seq

Genomic Coordinates Forward (+)

5661250 .. 5664212

Gene Structure 2963 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGCACAGCTTCTGGTGGCTCCTTGGTGTTCTTCACCATGTCATTTGGGTTGTAACCATGTTGCTTACAGTCCAAGCCATGCCGCCACCGCCCCCAATTCGCTGCGACGCATCAACCGGGTGCAGCCTCTCCAACTCCTACGGCGTATGGGGTGATAGAAAAGATTGCCACGTCCCATCCGCGGCACACCCACAAACCGAAGAGGACCTCCGCCTCGCCGTGGCTTTCGCAAGCAAAAACAAGGTCAAGATCAAAGTGGTGAGCAAATTTTCACATACCATACCAAAGTTGGCATGTCCCGACATGAGTTTTGGAGACGCAATGCTAATAAGCACGGCCAATGTCAATTCCACGATTGAAATCGATGTAGCGAATTTAGCTGTCACGGTTGATGCCGGCGTAGGGCTACGACAGTTGATCGACAAAGTAGAGGAAGCTGGGCTGAGCTTGGTGGCTGCGCCGTATTGGGAGGGTGTGAGTGTAGGAGGGCTTATAAGCACGGGAGCACATGGAAGCTCGTGGTGGGGAAGAGGAGGAGCAGTGCATGATCATGTTATTGGTCTTAATCTTGTTGTTCCAGCAAACCGATCAGAAGGGTATGCGAAAATTCTCAGATTCGATTCAAAAGATGAAATCTTTAAAGCTGCAAAAGTTTCATTGGGGTTGTTGGGTATCATCTCCAAGGTGAAGTTGAGATTGGAGGCAGCATTCAAAAGGAGCATAACGTATAACTTTACAGACGATGCTCAAATAGAGGACATATACATGGAGCATGCTAAAAAGTATGAGTTTGGAGACATAACTTGGTATCCATCGAAGCATACAGCTGCATACAGATACGATAACAGAGTTCCTCTCACCGCAGCAGGCGATGGAACATATGATTTCATAGGCTTCCAGTCCAATTCTGTTGTGGTCGCCAAGACTATAAGAGCAACAGAGAAAACGTTGGACAACGGACGAAGCTCGGTTTTCCAATGCACACTAGCATCTACATTTTTGGGGGCCAAGAAATTATTGGCCAATGGTTTGAAAAATAACCTAATCTTCACTGGTTACCCTGTAGTAGGCCACCAGGGAAAAATGCAAACCTCAGGTTCATGTCTGTACTCAACAGGCACAGACAATTCCTGTGCATGGGACCCAAGAATCAACGGCCTCTTCTTTTACGAGACAACAGCAATATTTCCAGCATCAAAATTTGCAGACTTCATCAGAGACGTCAAAAAACTACGAGACCTAAAACCAGAAAACTTCTGTGGCGTGGATATTTACGATGGTTTTTTAATTCGTTTCATTAGGGTTTCCGATGCCTATCTTGGTCAACAAGAAAACTCCGTGGTCGTTGACTTTAATTACTATAGAGCCGCTGATGCATGGACTCCAAGGTTCAATGAAGACGTGTGGGAAGAAGTGGAGCAACTGGCATTTTCCAAGCATGGGGCAAAGCCACACTGGGCTAAAAACAGAAACGCAGCGTTTTTGGACGTGCAGAAAAAGTACCCTAATTTTAACAAGTTTTTGGGTGTGAAAAGACTGTTGGATCCTCAAAATATATTGTCGAGTGAATGGTCGGATGAGATTTTGTTTGGGAAAGCAGGTGCAAGTGCTGATGGGTGTGCTTTGGAGGGTCTTTGTATATGTTCTGAAGATCGGCATTGCAGCCCTGTGAAAGGGTATTTCTGTCAACCTGGACTTATTTATAAGGAGGCTAGAGTTTGTAGGTACTCATCATCCTCTGTAGAATCAGAGAGTGACAAAACTAATTTGATATTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005975 GO:0005996 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009987 GO:0016051 GO:0016053 GO:0016491 GO:0016614 GO:0016899 GO:0019752 GO:0019852 GO:0019853 GO:0036094 GO:0042364 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0046364 GO:0046394 GO:0048037 GO:0050105 GO:0050660 GO:0050662 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALO FAD_binding_4

Protein Analysis

594

Amino Acids

65.62

Weight (kDa)

6.94

Isoelectric Point (pI)

33.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	62 - 193	1.1e-16	FAD binding domain
ALO	PF04030	397 - 527	7.4e-13	D-arabinono-1,4-lactone oxidase
GULLO2-like_3rd	PF22906	538 - 576	5.1e-23	L-gulonolactone oxidase 2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014569)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11540
fragaria_vesca	FvH4_2g35870
malus_domestica	MD08G1116100.v1.1 MD15G1095800.v1.1
prunus_persica	Prupe.1G450800_v2.0.a1
pyrus_communis	pycom08g09690 pycom15g08810
rosa_chinensis	RchiOBHm_Chr6g0305951
rosa_laevigata	RLG00000010843
rosa_multiflora	Rmu_sc0001809.1_g000053
rosa_roxburghii	Rroxscaffold_7G00162190
rosa_rugosa	Rorug06G0345600
rosa_samantha	Rh6AG457300 Rh6BG443800 Rh6CG471300 Rh6DG457800
rosa_wichuraiana	Rw6G039900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	494, 1704
AarI	CACCTGC	1 cut(s)	1589
AatII	GACGTC	1 cut(s)	1224
Acc36I	ACCTGC	1 cut(s)	1589
AccII	CGCG	1 cut(s)	182
AciI	CCGC	7 cut(s)	83, 89, 180, 182, 211, 861, 1368
AclI	AACGTT	1 cut(s)	947
AclWI	GGATC	2 cut(s)	1538, 1551
AcoI	YGGCCR	2 cut(s)	336, 1020
AcsI	RAATTY	4 cut(s)	266, 373, 606, 1199
AcuI	CTGAAG	1 cut(s)	1668
AcyI	GRCGYC	1 cut(s)	1221
AfaI	GTAC	3 cut(s)	1109, 1502, 1727
AfiI	CCNNNNNNNGG	7 cut(s)	181, 220, 402, 1067, 1137, 1440, 1673
AflIII	ACRYGT	1 cut(s)	1401
AgsI	TTSAA	5 cut(s)	359, 624, 712, 1033, 1393
AjiI	CACGTC	3 cut(s)	172, 1402, 1489
AjnI	CCWGG	2 cut(s)	1074, 1690
AjuI	GAANNNNNNNTTGG	4 cut(s)	680, 712, 1523, 1555
AluBI	AGCT	8 cut(s)	9, 380, 437, 447, 516, 644, 827, 966
AluI	AGCT	8 cut(s)	9, 380, 437, 447, 516, 644, 827, 966
Alw21I	GWGCWC	1 cut(s)	508
Alw26I	GTCTC	5 cut(s)	309, 789, 1166, 1212, 1230
AlwI	GGATC	2 cut(s)	1538, 1551
AlwNI	CAGNNNCTG	1 cut(s)	12
AoxI	GGCC	5 cut(s)	336, 1005, 1020, 1069, 1156
ApeKI	GCWGC	9 cut(s)	102, 123, 455, 644, 704, 827, 863, 1475, 1662
ApoI	RAATTY	4 cut(s)	266, 373, 606, 1199
ArsI	GACNNNNNNTTYG	4 cut(s)	228, 260, 293, 325
AspLEI	GCGC	1 cut(s)	460
AspS9I	GGNCC	3 cut(s)	205, 1005, 1141
AsuC2I	CCSGG	1 cut(s)	118
AsuHPI	GGTGA	5 cut(s)	26, 164, 271, 697, 850
AvaII	GGWCC	2 cut(s)	205, 1141
AxyI	CCTNAGG	1 cut(s)	1093
BalI	TGGCCA	1 cut(s)	1022
BamHI	GGATCC	1 cut(s)	1543
BauI	CACGAG	1 cut(s)	517
BbsI	GAAGAC	1 cut(s)	1404
Bbv12I	GWGCWC	1 cut(s)	508
BbvI	GCAGC	9 cut(s)	89, 135, 442, 631, 716, 814, 875, 1487, 1674
BccI	CCATC	5 cut(s)	184, 820, 866, 1271, 1607
BceAI	ACGGC	5 cut(s)	157, 203, 351, 445, 1171
BciT130I	CCWGG	2 cut(s)	1076, 1692
BciVI	GTATCC	1 cut(s)	819
BclI	TGATCA	1 cut(s)	547
BcnI	CCSGG	1 cut(s)	118
BcoDI	GTCTC	5 cut(s)	309, 789, 1166, 1212, 1230
BfaI	CTAG	2 cut(s)	986, 1713
BfmI	CTRYAG	3 cut(s)	1062, 1360, 1740
BfuAI	ACCTGC	1 cut(s)	1589
BfuI	GTATCC	1 cut(s)	819
BlpI	GCTNAGC	1 cut(s)	443
Bme1390I	CCNGG	3 cut(s)	118, 1076, 1692
Bme18I	GGWCC	2 cut(s)	205, 1141
BmgBI	CACGTC	3 cut(s)	172, 1402, 1489
BmgT120I	GGNCC	3 cut(s)	205, 1005, 1141
BmiI	GGNNCC	5 cut(s)	20, 1006, 1142, 1143, 1545
BmrFI	CCNGG	3 cut(s)	118, 1076, 1692
BmrI	ACTGGG	1 cut(s)	1465
BmsI	GCATC	7 cut(s)	119, 382, 733, 998, 1202, 1300, 1363
BmuI	ACTGGG	1 cut(s)	1465
BpiI	GAAGAC	1 cut(s)	1404
BplI	GAGNNNNNCTC	2 cut(s)	840, 872
Bpu1102I	GCTNAGC	1 cut(s)	443
BpuMI	CCSGG	1 cut(s)	118
Bsa29I	ATCGAT	1 cut(s)	363
BsaBI	GATNNNNATC	2 cut(s)	359, 1314
BsaHI	GRCGYC	1 cut(s)	1221
BsaI	GGTCTC	1 cut(s)	1230
BsaJI	CCNNGG	7 cut(s)	22, 180, 219, 681, 1075, 1338, 1385
BsaXI	ACNNNNNCTCC	2 cut(s)	525, 555
Bsc4I	CCNNNNNNNGG	7 cut(s)	181, 220, 402, 1067, 1137, 1440, 1673
Bse118I	RCCGGY	1 cut(s)	395
Bse1I	ACTGG	4 cut(s)	898, 1057, 1428, 1460
Bse21I	CCTNAGG	1 cut(s)	1093
Bse3DI	GCAATG	2 cut(s)	327, 1657
Bse8I	GATNNNNATC	2 cut(s)	359, 1314
BseBI	CCWGG	2 cut(s)	1076, 1692
BseCI	ATCGAT	1 cut(s)	363
BseDI	CCNNGG	7 cut(s)	22, 180, 219, 681, 1075, 1338, 1385
BseGI	GGATG	3 cut(s)	176, 1582, 1733
BseJI	GATNNNNATC	2 cut(s)	359, 1314
BseLI	CCNNNNNNNGG	7 cut(s)	181, 220, 402, 1067, 1137, 1440, 1673
BseMI	GCAATG	2 cut(s)	327, 1657
BseMII	CTCAG	3 cut(s)	434, 625, 1107
BseNI	ACTGG	4 cut(s)	898, 1057, 1428, 1460
BseRI	GAGGAG	2 cut(s)	546, 549
BseXI	GCAGC	9 cut(s)	89, 135, 442, 631, 716, 814, 875, 1487, 1674
BseYI	CCCAGC	1 cut(s)	437
BsgI	GTGCAG	2 cut(s)	142, 1511
Bsh1236I	CGCG	1 cut(s)	182
BshFI	GGCC	5 cut(s)	338, 1007, 1022, 1071, 1158
BshVI	ATCGAT	1 cut(s)	363
BsiHKAI	GWGCWC	1 cut(s)	508
BsiSI	CCGG	2 cut(s)	117, 396
BslFI	GGGAC	3 cut(s)	158, 282, 1154
BslI	CCNNNNNNNGG	7 cut(s)	181, 220, 402, 1067, 1137, 1440, 1673
BsmAI	GTCTC	5 cut(s)	309, 789, 1166, 1212, 1230
BsmBI	CGTCTC	2 cut(s)	309, 1212
BsmFI	GGGAC	3 cut(s)	158, 282, 1154
BsmI	GAATGC	1 cut(s)	707
BsnI	GGCC	5 cut(s)	338, 1007, 1022, 1071, 1158
Bso31I	GGTCTC	1 cut(s)	1230
Bsp1286I	GDGCHC	1 cut(s)	508
Bsp143I	GATC	6 cut(s)	249, 417, 547, 587, 1543, 1651
Bsp1720I	GCTNAGC	1 cut(s)	443
BspACI	CCGC	7 cut(s)	83, 89, 180, 182, 211, 861, 1368
BspANI	GGCC	5 cut(s)	338, 1007, 1022, 1071, 1158
BspCNI	CTCAG	3 cut(s)	435, 624, 1106
BspDI	ATCGAT	1 cut(s)	363
BspFNI	CGCG	1 cut(s)	182
BspLI	GGNNCC	5 cut(s)	20, 1006, 1142, 1143, 1545
BspMI	ACCTGC	1 cut(s)	1589
BspPI	GGATC	2 cut(s)	1538, 1551
BspTNI	GGTCTC	1 cut(s)	1230
BsrDI	GCAATG	2 cut(s)	327, 1657
BsrFI	RCCGGY	1 cut(s)	395
BsrI	ACTGG	4 cut(s)	898, 1057, 1428, 1460
BssAI	RCCGGY	1 cut(s)	395
BssECI	CCNNGG	7 cut(s)	22, 180, 219, 681, 1075, 1338, 1385
BssMI	GATC	6 cut(s)	249, 417, 547, 587, 1543, 1651
BssNI	GRCGYC	1 cut(s)	1221
BssSI	CACGAG	1 cut(s)	517
BssT1I	CCWWGG	3 cut(s)	22, 681, 1385
Bst2BI	CACGAG	1 cut(s)	517
Bst2UI	CCWGG	2 cut(s)	1076, 1692
Bst4CI	ACNGT	4 cut(s)	70, 388, 414, 1539
Bst6I	CTCTTC	3 cut(s)	195, 523, 1166
BstACI	GRCGYC	1 cut(s)	1221
BstC8I	GCNNGC	4 cut(s)	232, 397, 774, 868
BstDEI	CTNAG	3 cut(s)	443, 611, 1093
BstDSI	CCRYGG	3 cut(s)	180, 219, 1338
BstEII	GGTNACC	1 cut(s)	1055
BstENI	CCTNNNNNAGG	2 cut(s)	1065, 1671
BstF5I	GGATG	3 cut(s)	176, 1582, 1733
BstFNI	CGCG	1 cut(s)	182
BstHHI	GCGC	1 cut(s)	460
BstKTI	GATC	6 cut(s)	252, 420, 550, 590, 1546, 1654
BstMAI	GTCTC	5 cut(s)	309, 789, 1166, 1212, 1230
BstMBI	GATC	6 cut(s)	249, 417, 547, 587, 1543, 1651
BstMWI	GCNNNNNNNGC	3 cut(s)	88, 377, 1373
BstNI	CCWGG	2 cut(s)	1076, 1692
BstNSI	RCATGY	2 cut(s)	297, 776
BstPI	GGTNACC	1 cut(s)	1055
BstSCI	CCNGG	3 cut(s)	116, 1074, 1690
BstSFI	CTRYAG	3 cut(s)	1062, 1360, 1740
BstUI	CGCG	1 cut(s)	182
BstV1I	GCAGC	9 cut(s)	89, 135, 442, 631, 716, 814, 875, 1487, 1674
BstV2I	GAAGAC	1 cut(s)	1404
BstX2I	RGATCY	1 cut(s)	1543
BstYI	RGATCY	1 cut(s)	1543
Bsu15I	ATCGAT	1 cut(s)	363
Bsu36I	CCTNAGG	1 cut(s)	1093
BsuI	GTATCC	1 cut(s)	819
BsuRI	GGCC	5 cut(s)	338, 1007, 1022, 1071, 1158
BsuTUI	ATCGAT	1 cut(s)	363
BtgI	CCRYGG	3 cut(s)	180, 219, 1338
BtgZI	GCGATG	1 cut(s)	885
BtrI	CACGTC	3 cut(s)	172, 1402, 1489
BtsCI	GGATG	3 cut(s)	176, 1582, 1733
BtsI	GCAGTG	1 cut(s)	546
BtsIMutI	CAGTG	3 cut(s)	546, 1050, 1453
BveI	ACCTGC	1 cut(s)	1589
Cac8I	GCNNGC	4 cut(s)	232, 397, 774, 868
CaiI	CAGNNNCTG	1 cut(s)	12
CfoI	GCGC	1 cut(s)	460
Cfr10I	RCCGGY	1 cut(s)	395
Cfr13I	GGNCC	3 cut(s)	205, 1005, 1141
Cfr42I	CCGCGG	1 cut(s)	183
ClaI	ATCGAT	1 cut(s)	363
CseI	GACGC	2 cut(s)	116, 326
Csp6I	GTAC	3 cut(s)	1108, 1501, 1726
CviQI	GTAC	3 cut(s)	1108, 1501, 1726
DdeI	CTNAG	3 cut(s)	443, 611, 1093
DpnI	GATC	6 cut(s)	251, 419, 549, 589, 1545, 1653
DpnII	GATC	6 cut(s)	249, 417, 547, 587, 1543, 1651
DraI	TTTAAA	1 cut(s)	640
EaeI	YGGCCR	2 cut(s)	336, 1020
Eam1104I	CTCTTC	3 cut(s)	195, 523, 1166
EarI	CTCTTC	3 cut(s)	195, 523, 1166
EciI	GGCGGA	1 cut(s)	200
Eco130I	CCWWGG	3 cut(s)	22, 681, 1385
Eco31I	GGTCTC	1 cut(s)	1230
Eco47I	GGWCC	2 cut(s)	205, 1141
Eco57I	CTGAAG	1 cut(s)	1668
Eco81I	CCTNAGG	1 cut(s)	1093
Eco91I	GGTNACC	1 cut(s)	1055
EcoNI	CCTNNNNNAGG	2 cut(s)	1065, 1671
EcoO109I	RGGNCCY	2 cut(s)	205, 1141
EcoO65I	GGTNACC	1 cut(s)	1055
EcoRII	CCWGG	2 cut(s)	1074, 1690
EcoT14I	CCWWGG	3 cut(s)	22, 681, 1385
EcoT22I	ATGCAT	1 cut(s)	1378
ErhI	CCWWGG	3 cut(s)	22, 681, 1385
Esp3I	CGTCTC	2 cut(s)	309, 1212
FaqI	GGGAC	3 cut(s)	158, 282, 1154
FauNDI	CATATG	1 cut(s)	880
FbaI	TGATCA	1 cut(s)	547
FokI	GGATG	3 cut(s)	163, 1589, 1720
FspBI	CTAG	2 cut(s)	986, 1713
GlaI	GCGC	1 cut(s)	459
GsaI	CCCAGC	1 cut(s)	441
HaeIII	GGCC	5 cut(s)	338, 1007, 1022, 1071, 1158
HapII	CCGG	2 cut(s)	117, 396
HgaI	GACGC	2 cut(s)	116, 326
HhaI	GCGC	1 cut(s)	460
Hin1I	GRCGYC	1 cut(s)	1221
Hin6I	GCGC	1 cut(s)	458
HinP1I	GCGC	1 cut(s)	458
HincII	GTYRAC	3 cut(s)	1325, 1348, 1688
HindII	GTYRAC	3 cut(s)	1325, 1348, 1688
HinfI	GANTC	5 cut(s)	615, 620, 1149, 1381, 1745
HpaII	CCGG	2 cut(s)	117, 396
HphI	GGTGA	5 cut(s)	26, 164, 271, 697, 850
Hpy166II	GTNNAC	3 cut(s)	1325, 1348, 1688
Hpy188I	TCNGA	7 cut(s)	592, 614, 1217, 1309, 1576, 1648, 1750
Hpy188III	TCNNGA	2 cut(s)	247, 299
Hpy8I	GTNNAC	3 cut(s)	1325, 1348, 1688
Hpy99I	CGWCG	1 cut(s)	110
HpyAV	CCTTC	1 cut(s)	587
HpyCH4III	ACNGT	4 cut(s)	70, 388, 414, 1539
HpyCH4IV	ACGT	6 cut(s)	171, 725, 947, 1221, 1401, 1488
HpyF10VI	GCNNNNNNNGC	3 cut(s)	88, 377, 1373
HpyF3I	CTNAG	3 cut(s)	443, 611, 1093
HpySE526I	ACGT	6 cut(s)	171, 725, 947, 1221, 1401, 1488
Hsp92I	GRCGYC	1 cut(s)	1221
HspAI	GCGC	1 cut(s)	458
KflI	GGGWCCC	1 cut(s)	1141
KroI	GCCGGC	1 cut(s)	395
KroNI	GCCGGC	1 cut(s)	397
Ksp22I	TGATCA	1 cut(s)	547
KspI	CCGCGG	1 cut(s)	183
Kzo9I	GATC	6 cut(s)	249, 417, 547, 587, 1543, 1651
LmnI	GCTCC	6 cut(s)	24, 503, 536, 717, 769, 1417
Lsp1109I	GCAGC	9 cut(s)	89, 135, 442, 631, 716, 814, 875, 1487, 1674
LweI	GCATC	7 cut(s)	119, 382, 733, 998, 1202, 1300, 1363
MaeI	CTAG	2 cut(s)	986, 1713
MaeII	ACGT	6 cut(s)	171, 725, 947, 1221, 1401, 1488
MaeIII	GTNAC	4 cut(s)	52, 382, 1055, 1754
MalI	GATC	6 cut(s)	251, 419, 549, 589, 1545, 1653
MboI	GATC	6 cut(s)	249, 417, 547, 587, 1543, 1651
MboII	GAAGA	8 cut(s)	23, 212, 540, 1039, 1153, 1409, 1421, 1661
MflI	RGATCY	1 cut(s)	1543
MhlI	GDGCHC	1 cut(s)	508
MlsI	TGGCCA	1 cut(s)	1022
MluNI	TGGCCA	1 cut(s)	1022
MlyI	GAGTC	1 cut(s)	1375
MmeI	TCCRAC	4 cut(s)	156, 930, 1521, 1554
Mox20I	TGGCCA	1 cut(s)	1022
Mph1103I	ATGCAT	1 cut(s)	1378
MroNI	GCCGGC	1 cut(s)	395
MscI	TGGCCA	1 cut(s)	1022
MseI	TTAA	6 cut(s)	564, 639, 1286, 1353, 1512, 1780
MslI	CAYNNNNRTG	2 cut(s)	549, 764
Msp20I	TGGCCA	1 cut(s)	1022
MspA1I	CMGCKG	3 cut(s)	182, 827, 1370
MspI	CCGG	2 cut(s)	117, 396
MspR9I	CCNGG	3 cut(s)	118, 1076, 1692
Mva1269I	GAATGC	1 cut(s)	707
MvaI	CCWGG	2 cut(s)	1076, 1692
MvnI	CGCG	1 cut(s)	182
MwoI	GCNNNNNNNGC	3 cut(s)	88, 377, 1373
NaeI	GCCGGC	1 cut(s)	397
NciI	CCSGG	1 cut(s)	118
NdeI	CATATG	1 cut(s)	880
NdeII	GATC	6 cut(s)	249, 417, 547, 587, 1543, 1651
NgoMIV	GCCGGC	1 cut(s)	395
NlaIV	GGNNCC	5 cut(s)	20, 1006, 1142, 1143, 1545
NmuCI	GTSAC	2 cut(s)	382, 1754
NsiI	ATGCAT	1 cut(s)	1378
NspI	RCATGY	2 cut(s)	297, 776
PaeI	GCATGC	1 cut(s)	776
PaqCI	CACCTGC	1 cut(s)	1589
PctI	GAATGC	1 cut(s)	707
PdiI	GCCGGC	1 cut(s)	397
PfeI	GAWTC	4 cut(s)	615, 620, 1149, 1745
PleI	GAGTC	1 cut(s)	1375
PpsI	GAGTC	1 cut(s)	1375
PpuMI	RGGWCCY	2 cut(s)	205, 1141
PsiI	TTATAA	2 cut(s)	494, 1704
Psp1406I	AACGTT	1 cut(s)	947
Psp5II	RGGWCCY	2 cut(s)	205, 1141
Psp6I	CCWGG	2 cut(s)	1074, 1690
PspEI	GGTNACC	1 cut(s)	1055
PspFI	CCCAGC	1 cut(s)	437
PspGI	CCWGG	2 cut(s)	1074, 1690
PspN4I	GGNNCC	5 cut(s)	20, 1006, 1142, 1143, 1545
PspPI	GGNCC	3 cut(s)	205, 1005, 1141
PspPPI	RGGWCCY	2 cut(s)	205, 1141
PstNI	CAGNNNCTG	1 cut(s)	12
PsuI	RGATCY	1 cut(s)	1543
PvuII	CAGCTG	1 cut(s)	827
RsaI	GTAC	3 cut(s)	1109, 1502, 1727
RsaNI	GTAC	3 cut(s)	1108, 1501, 1726
RseI	CAYNNNNRTG	2 cut(s)	549, 764
SacII	CCGCGG	1 cut(s)	183
SaqAI	TTAA	6 cut(s)	564, 639, 1286, 1353, 1512, 1780
Sau3AI	GATC	6 cut(s)	249, 417, 547, 587, 1543, 1651
Sau96I	GGNCC	3 cut(s)	205, 1005, 1141
SchI	GAGTC	1 cut(s)	1375
ScrFI	CCNGG	3 cut(s)	118, 1076, 1692
SduI	GDGCHC	1 cut(s)	508
SfaNI	GCATC	7 cut(s)	119, 382, 733, 998, 1202, 1300, 1363
SfcI	CTRYAG	3 cut(s)	1062, 1360, 1740
Sfr303I	CCGCGG	1 cut(s)	183
SgrBI	CCGCGG	1 cut(s)	183
SinI	GGWCC	2 cut(s)	205, 1141
SmiMI	CAYNNNNRTG	2 cut(s)	549, 764
SphI	GCATGC	1 cut(s)	776
SsiI	CCGC	7 cut(s)	83, 89, 180, 182, 211, 861, 1368
SspI	AATATT	1 cut(s)	1185
SspMI	CTAG	2 cut(s)	986, 1713
StyD4I	CCNGG	3 cut(s)	116, 1074, 1690
StyI	CCWWGG	3 cut(s)	22, 681, 1385
TaaI	ACNGT	4 cut(s)	70, 388, 414, 1539
TaiI	ACGT	6 cut(s)	174, 728, 950, 1224, 1404, 1491
TaqI	TCGA	5 cut(s)	363, 420, 618, 815, 1562
TatI	WGTACW	1 cut(s)	1107
TauI	GCSGC	3 cut(s)	85, 185, 1370
TfiI	GAWTC	4 cut(s)	615, 620, 1149, 1745
Tru1I	TTAA	6 cut(s)	564, 639, 1286, 1353, 1512, 1780
Tru9I	TTAA	6 cut(s)	564, 639, 1286, 1353, 1512, 1780
TscAI	CASTG	3 cut(s)	546, 1057, 1460
TseFI	GTSAC	2 cut(s)	382, 1754
TseI	GCWGC	9 cut(s)	102, 123, 455, 644, 704, 827, 863, 1475, 1662
Tsp45I	GTSAC	2 cut(s)	382, 1754
TspDTI	ATGAA	7 cut(s)	645, 645, 877, 1089, 1201, 1285, 1410
TspGWI	ACGGA	2 cut(s)	972, 1327
TspRI	CASTG	3 cut(s)	546, 1057, 1460
VpaK11BI	GGWCC	2 cut(s)	205, 1141
XagI	CCTNNNNNAGG	2 cut(s)	1065, 1671
XapI	RAATTY	4 cut(s)	266, 373, 606, 1199
XceI	RCATGY	2 cut(s)	297, 776
XcmI	CCANNNNNNNNNTGG	3 cut(s)	286, 910, 1015
XspI	CTAG	2 cut(s)	986, 1713
ZraI	GACGTC	1 cut(s)	1222
Zsp2I	ATGCAT	1 cut(s)	1378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.