Rmu_sc0001809.1_g000053

D-arabinono-1,4-lactone oxidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001809.1
Physical Location & Seq
Reverse (-)
280910 .. 282992
2083 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001809.1_g000053.1.cds

Sequence Viewer

Length: 1761 bp
atgtacagctcatggtggctcctcggtgctattcaccttctcgtctccgtcgtcgccgccatgctgccacaatctccgattcaatgcgacggaaccggaggctgcaacctcttcaactcctacggtgtttggaacgacagaaaaaattgccatgttccaaatgtcacgtaccccaggactgaaaatgagctacttagagctgtggcctacgcaaaccagaacaagctcaagcttagagtggtgagccagttttcacataccatacccaaactggcatgccctgccacaagtacaggaaattcattgctaataagcacatcaagttatgattctgggatcgaaattgatgctgccaatttagctgtcacagttgatggtggtgtaggactgcggaaattgattgacacagttgaagcagctggattgagtttggtggctgcaccatattgggagggggtgagtattggagggcttataagcacaggttcacatggaagctcatggtggggaaaaggaggttctgttcatgatcatattgttggtctcagcctaattgttcccgctaaacagtctgaagggtatgcgaaaattcttagattagaacccaaagatcaactttttaatgctgccaaagtttccatgggattgttgggtgtcatatccaaggtgaagttgttactagagaagggattcaaaagaagcgtatcatatgacttcactgatgatgatcaaattgaggacaagtacgtggaccatggaaagaagtatgaatttgcggacattacttggtacccatcaaagcatacagctgcttatagatatgataatcgagttcccttgaacgtctctggtgatggagtttacgacttccttggcttccaagccaatcccattttggtctccaaatctgttagggcatcagagaaagtcatggacaatgggcacaacttgagtggaaagtgcatactagcctcttcatttttagggtacaagaaattagtagccaatggtctgaagaatggcctaatcttcactgggtacccagtaattggtaaccaaggcaaaatgcaaacttcaggttcatgtttatactcaacaggcaaagacagctcctgtgcttgggatccaagaatcaatggcctctttttctacgagacaactgcaatatttccggccccaaaattccgagacttcatccttgatgtgaagaagctaagagatctggtcaagccagagaatttctgtggggtggacatttacaacggatttctgatacgttttattaaggcctctgaggcatatcttggtcaacctgaggaatctgtggtggttgacttcaactactatagagctgatgatgcttcaactccaagatttgaccaagatgtttgggaagaagtggagcaattggctttcttcaagcatggggcaaagccacattgggctaaaaacaggaacatggcattcttgaatgtgcagagcaagtactccaagttcaacaagtttgtgggtgtgaaaagacagttggacccccagaacatgttctcaagtgaatggtctgatgagattgtgtttggaaaggaaggtgcgaagagtgatgggtgtggtttggagggtatgtgcatttgttcagaggacacgcactgtagcccaggaaaagggtatttttgtaaacctggcgttgtttatgaggaagcaagagtttgtaggtattctccatcctcaaatgtggaatcagatagtcctaaaactgatttgtga

Protein Analysis

586

Amino Acids

64.64

Weight (kDa)

7.14

Isoelectric Point (pI)

33.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014569)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G11540
fragaria_vesca FvH4_2g35870
malus_domestica MD08G1116100.v1.1 MD15G1095800.v1.1
prunus_persica Prupe.1G450800_v2.0.a1
pyrus_communis pycom08g09690 pycom15g08810
rosa_chinensis RchiOBHm_Chr6g0305951
rosa_laevigata RLG00000010843
rosa_multiflora Rmu_sc0001809.1_g000053
rosa_roxburghii Rroxscaffold_7G00162190
rosa_rugosa Rorug06G0345600
rosa_samantha Rh6AG457300 Rh6BG443800 Rh6CG471300 Rh6DG457800
rosa_wichuraiana Rw6G039900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 476
Acc65I GGTACC 2 cut(s) 789, 1038
AccB1I GGYRCC 2 cut(s) 789, 1038
AccB7I CCANNNNNTGG 1 cut(s) 1049
AciI CCGC 4 cut(s) 57, 391, 561, 776
AclWI GGATC 3 cut(s) 344, 1118, 1131
AcsI RAATTY 5 cut(s) 298, 588, 770, 1181, 1237
AcuI CTGAAG 3 cut(s) 594, 1034, 1059
AfaI GTAC 8 cut(s) 5, 170, 292, 746, 791, 989, 1040, 1487
AfiI CCNNNNNNNGG 3 cut(s) 1049, 1119, 1658
AflIII ACRYGT 1 cut(s) 1539
AjnI CCWGG 3 cut(s) 173, 1651, 1675
AjuI GAANNNNNNNTTGG 2 cut(s) 1508, 1540
AloI GAACNNNNNNTCC 2 cut(s) 507, 539
Alw26I GTCTC 6 cut(s) 49, 548, 850, 904, 1148, 1182
AlwI GGATC 3 cut(s) 344, 1118, 1131
AlwNI CAGNNNCTG 1 cut(s) 1113
AoxI GGCC 5 cut(s) 204, 1021, 1138, 1173, 1287
ApeKI GCWGC 7 cut(s) 64, 102, 350, 416, 437, 626, 809
ApoI RAATTY 5 cut(s) 298, 588, 770, 1181, 1237
Asp700I GAANNNNTTC 2 cut(s) 689, 1541
Asp718I GGTACC 2 cut(s) 789, 1038
AspS9I GGNCC 3 cut(s) 751, 1174, 1528
AsuHPI GGTGA 5 cut(s) 26, 253, 469, 679, 863
AvaII GGWCC 2 cut(s) 751, 1528
AxyI CCTNAGG 1 cut(s) 1314
BaeGI GKGCMC 1 cut(s) 945
BamHI GGATCC 1 cut(s) 1123
BanI GGYRCC 2 cut(s) 789, 1038
BbvI GCAGC 7 cut(s) 51, 89, 337, 424, 428, 613, 796
BccI CCATC 5 cut(s) 368, 802, 848, 1592, 1726
BcgI CGANNNNNNTGC 4 cut(s) 329, 363, 1142, 1176
BciT130I CCWGG 3 cut(s) 175, 1653, 1677
BclI TGATCA 2 cut(s) 529, 727
BcoDI GTCTC 6 cut(s) 49, 548, 850, 904, 1148, 1182
BfaI CTAG 2 cut(s) 680, 968
BfmI CTRYAG 2 cut(s) 1345, 1645
BglI GCCNNNNNGGC 1 cut(s) 1295
BglII AGATCT 1 cut(s) 1219
BisI GCNGC 8 cut(s) 57, 65, 103, 351, 417, 438, 627, 810
BlsI GCNGC 8 cut(s) 58, 66, 104, 352, 418, 439, 628, 811
BmcAI AGTACT 1 cut(s) 1487
Bme1390I CCNGG 3 cut(s) 175, 1653, 1677
Bme18I GGWCC 2 cut(s) 751, 1528
BmgT120I GGNCC 3 cut(s) 751, 1174, 1528
BmiI GGNNCC 7 cut(s) 20, 94, 791, 1040, 1125, 1176, 1530
BmrFI CCNGG 3 cut(s) 175, 1653, 1677
BmrI ACTGGG 2 cut(s) 1037, 1044
BmsI GCATC 3 cut(s) 337, 926, 1348
BmuI ACTGGG 2 cut(s) 1037, 1044
BpuEI CTTGAG 3 cut(s) 212, 970, 1531
BsaAI YACGTR 2 cut(s) 168, 748
BsaBI GATNNNNATC 1 cut(s) 726
BsaI GGTCTC 2 cut(s) 548, 904
BsaJI CCNNGG 8 cut(s) 22, 173, 639, 663, 754, 871, 1057, 1651
BsaWI WCCGGW 1 cut(s) 95
BsaXI ACNNNNNCTCC 4 cut(s) 507, 537, 1604, 1634
Bsc4I CCNNNNNNNGG 3 cut(s) 1049, 1119, 1658
Bse1I ACTGG 4 cut(s) 247, 276, 1039, 1043
Bse21I CCTNAGG 1 cut(s) 1314
Bse3DI GCAATG 1 cut(s) 302
Bse8I GATNNNNATC 1 cut(s) 726
BseBI CCWGG 3 cut(s) 175, 1653, 1677
BseDI CCNNGG 8 cut(s) 22, 173, 639, 663, 754, 871, 1057, 1651
BseGI GGATG 2 cut(s) 1194, 1718
BseJI GATNNNNATC 1 cut(s) 726
BseLI CCNNNNNNNGG 3 cut(s) 1049, 1119, 1658
BseMI GCAATG 1 cut(s) 302
BseMII CTCAG 3 cut(s) 559, 1284, 1305
BseNI ACTGG 4 cut(s) 247, 276, 1039, 1043
BseRI GAGGAG 1 cut(s) 11
BseSI GKGCMC 1 cut(s) 945
BseXI GCAGC 7 cut(s) 51, 89, 337, 424, 428, 613, 796
BsgI GTGCAG 2 cut(s) 423, 1496
BshFI GGCC 5 cut(s) 206, 1023, 1140, 1175, 1289
BshNI GGYRCC 2 cut(s) 789, 1038
BsiSI CCGG 2 cut(s) 96, 1172
BslI CCNNNNNNNGG 3 cut(s) 1049, 1119, 1658
BsmAI GTCTC 6 cut(s) 49, 548, 850, 904, 1148, 1182
BsmBI CGTCTC 2 cut(s) 49, 850
BsmI GAATGC 1 cut(s) 1463
BsnI GGCC 5 cut(s) 206, 1023, 1140, 1175, 1289
Bso31I GGTCTC 2 cut(s) 548, 904
Bsp1286I GDGCHC 1 cut(s) 945
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 6 cut(s) 336, 529, 610, 727, 1123, 1219
Bsp19I CCATGG 2 cut(s) 639, 754
BspACI CCGC 4 cut(s) 57, 391, 561, 776
BspANI GGCC 5 cut(s) 206, 1023, 1140, 1175, 1289
BspCNI CTCAG 3 cut(s) 558, 1285, 1306
BspHI TCATGA 1 cut(s) 526
BspLI GGNNCC 7 cut(s) 20, 94, 791, 1040, 1125, 1176, 1530
BspPI GGATC 3 cut(s) 344, 1118, 1131
BspT107I GGYRCC 2 cut(s) 789, 1038
BspTNI GGTCTC 2 cut(s) 548, 904
BsrDI GCAATG 1 cut(s) 302
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 4 cut(s) 247, 276, 1039, 1043
BssECI CCNNGG 8 cut(s) 22, 173, 639, 663, 754, 871, 1057, 1651
BssMI GATC 6 cut(s) 336, 529, 610, 727, 1123, 1219
BssT1I CCWWGG 5 cut(s) 639, 663, 754, 871, 1057
Bst2UI CCWGG 3 cut(s) 175, 1653, 1677
Bst4CI ACNGT 6 cut(s) 125, 370, 409, 570, 1524, 1646
Bst6I CTCTTC 3 cut(s) 116, 979, 1586
BstAPI GCANNNNNTGC 1 cut(s) 281
BstAUI TGTACA 1 cut(s) 3
BstBAI YACGTR 2 cut(s) 168, 748
BstC8I GCNNGC 1 cut(s) 277
BstDEI CTNAG 7 cut(s) 194, 233, 545, 593, 1214, 1293, 1314
BstDSI CCRYGG 2 cut(s) 639, 754
BstEII GGTNACC 1 cut(s) 1052
BstF5I GGATG 2 cut(s) 1194, 1718
BstKTI GATC 6 cut(s) 339, 532, 613, 730, 1126, 1222
BstMAI GTCTC 6 cut(s) 49, 548, 850, 904, 1148, 1182
BstMBI GATC 6 cut(s) 336, 529, 610, 727, 1123, 1219
BstMWI GCNNNNNNNGC 5 cut(s) 281, 359, 1107, 1295, 1358
BstNI CCWGG 3 cut(s) 175, 1653, 1677
BstNSI RCATGY 2 cut(s) 279, 1543
BstPI GGTNACC 1 cut(s) 1052
BstSCI CCNGG 3 cut(s) 173, 1651, 1675
BstSFI CTRYAG 2 cut(s) 1345, 1645
BstSLI GKGCMC 1 cut(s) 945
BstV1I GCAGC 7 cut(s) 51, 89, 337, 424, 428, 613, 796
BstX2I RGATCY 2 cut(s) 1123, 1219
BstYI RGATCY 2 cut(s) 1123, 1219
Bsu36I CCTNAGG 1 cut(s) 1314
BsuRI GGCC 5 cut(s) 206, 1023, 1140, 1175, 1289
BtgI CCRYGG 2 cut(s) 639, 754
BtsCI GGATG 2 cut(s) 1194, 1718
BtsIMutI CAGTG 3 cut(s) 717, 1032, 1642
Cac8I GCNNGC 1 cut(s) 277
CaiI CAGNNNCTG 1 cut(s) 1113
CciI TCATGA 1 cut(s) 526
Cfr13I GGNCC 3 cut(s) 751, 1174, 1528
Csp6I GTAC 8 cut(s) 4, 169, 291, 745, 790, 988, 1039, 1486
CspCI CAANNNNNGTGG 2 cut(s) 934, 969
CviQI GTAC 8 cut(s) 4, 169, 291, 745, 790, 988, 1039, 1486
DdeI CTNAG 7 cut(s) 194, 233, 545, 593, 1214, 1293, 1314
DpnI GATC 6 cut(s) 338, 531, 612, 729, 1125, 1221
DpnII GATC 6 cut(s) 336, 529, 610, 727, 1123, 1219
Eam1104I CTCTTC 3 cut(s) 116, 979, 1586
EarI CTCTTC 3 cut(s) 116, 979, 1586
Eco130I CCWWGG 5 cut(s) 639, 663, 754, 871, 1057
Eco147I AGGCCT 1 cut(s) 1289
Eco31I GGTCTC 2 cut(s) 548, 904
Eco47I GGWCC 2 cut(s) 751, 1528
Eco57I CTGAAG 3 cut(s) 594, 1034, 1059
Eco81I CCTNAGG 1 cut(s) 1314
Eco91I GGTNACC 1 cut(s) 1052
EcoO65I GGTNACC 1 cut(s) 1052
EcoRII CCWGG 3 cut(s) 173, 1651, 1675
EcoT14I CCWWGG 5 cut(s) 639, 663, 754, 871, 1057
ErhI CCWWGG 5 cut(s) 639, 663, 754, 871, 1057
Esp3I CGTCTC 2 cut(s) 49, 850
FalI AAGNNNNNCTT 2 cut(s) 600, 632
FauI CCCGC 1 cut(s) 568
FauNDI CATATG 1 cut(s) 709
FbaI TGATCA 2 cut(s) 529, 727
Fnu4HI GCNGC 8 cut(s) 57, 65, 103, 351, 417, 438, 627, 810
FokI GGATG 2 cut(s) 1181, 1705
Fsp4HI GCNGC 8 cut(s) 57, 65, 103, 351, 417, 438, 627, 810
FspBI CTAG 2 cut(s) 680, 968
GluI GCNGC 8 cut(s) 57, 65, 103, 351, 417, 438, 627, 810
HaeIII GGCC 5 cut(s) 206, 1023, 1140, 1175, 1289
HapII CCGG 2 cut(s) 96, 1172
HincII GTYRAC 2 cut(s) 1310, 1333
HindII GTYRAC 2 cut(s) 1310, 1333
HindIII AAGCTT 1 cut(s) 230
HinfI GANTC 6 cut(s) 79, 329, 690, 1131, 1319, 1733
HpaII CCGG 2 cut(s) 96, 1172
HphI GGTGA 5 cut(s) 26, 253, 469, 679, 863
Hpy166II GTNNAC 7 cut(s) 488, 751, 862, 1252, 1310, 1333, 1673
Hpy188III TCNNGA 2 cut(s) 527, 1468
Hpy8I GTNNAC 7 cut(s) 488, 751, 862, 1252, 1310, 1333, 1673
Hpy99I CGWCG 3 cut(s) 53, 56, 92
HpyAV CCTTC 4 cut(s) 47, 569, 679, 1577
HpyCH4III ACNGT 6 cut(s) 125, 370, 409, 570, 1524, 1646
HpyCH4IV ACGT 4 cut(s) 167, 747, 843, 1276
HpyCH4V TGCA 7 cut(s) 105, 440, 963, 1069, 1163, 1477, 1623
HpyF10VI GCNNNNNNNGC 5 cut(s) 281, 359, 1107, 1295, 1358
HpyF3I CTNAG 7 cut(s) 194, 233, 545, 593, 1214, 1293, 1314
HpySE526I ACGT 4 cut(s) 167, 747, 843, 1276
KpnI GGTACC 2 cut(s) 793, 1042
Ksp22I TGATCA 2 cut(s) 529, 727
Kzo9I GATC 6 cut(s) 336, 529, 610, 727, 1123, 1219
LmnI GCTCC 3 cut(s) 24, 1115, 1402
Lsp1109I GCAGC 7 cut(s) 51, 89, 337, 424, 428, 613, 796
LweI GCATC 3 cut(s) 337, 926, 1348
MaeI CTAG 2 cut(s) 680, 968
MaeII ACGT 4 cut(s) 167, 747, 843, 1276
MaeIII GTNAC 4 cut(s) 163, 364, 675, 1052
MalI GATC 6 cut(s) 338, 531, 612, 729, 1125, 1221
MboI GATC 6 cut(s) 336, 529, 610, 727, 1123, 1219
MboII GAAGA 8 cut(s) 103, 966, 1021, 1027, 1219, 1406, 1408, 1603
MfeI CAATTG 1 cut(s) 1406
MflI RGATCY 2 cut(s) 1123, 1219
MhlI GDGCHC 1 cut(s) 945
MmeI TCCRAC 1 cut(s) 1506
MroXI GAANNNNTTC 2 cut(s) 689, 1541
MseI TTAA 2 cut(s) 621, 1284
MspA1I CMGCKG 2 cut(s) 419, 809
MspI CCGG 2 cut(s) 96, 1172
MspR9I CCNGG 3 cut(s) 175, 1653, 1677
MunI CAATTG 1 cut(s) 1406
Mva1269I GAATGC 1 cut(s) 1463
MvaI CCWGG 3 cut(s) 175, 1653, 1677
MwoI GCNNNNNNNGC 5 cut(s) 281, 359, 1107, 1295, 1358
NcoI CCATGG 2 cut(s) 639, 754
NdeI CATATG 1 cut(s) 709
NdeII GATC 6 cut(s) 336, 529, 610, 727, 1123, 1219
NlaIV GGNNCC 7 cut(s) 20, 94, 791, 1040, 1125, 1176, 1530
NmuCI GTSAC 2 cut(s) 163, 364
NspI RCATGY 2 cut(s) 279, 1543
PaeI GCATGC 1 cut(s) 279
PagI TCATGA 1 cut(s) 526
PceI AGGCCT 1 cut(s) 1289
PciI ACATGT 1 cut(s) 1539
PcsI WCGNNNNNNNCGW 1 cut(s) 48
PctI GAATGC 1 cut(s) 1463
PdmI GAANNNNTTC 2 cut(s) 689, 1541
PfeI GAWTC 6 cut(s) 79, 329, 690, 1131, 1319, 1733
PflMI CCANNNNNTGG 1 cut(s) 1049
PkrI GCNGC 8 cut(s) 58, 66, 104, 352, 418, 439, 628, 811
Ppu21I YACGTR 2 cut(s) 168, 748
PscI ACATGT 1 cut(s) 1539
PsiI TTATAA 1 cut(s) 476
Psp6I CCWGG 3 cut(s) 173, 1651, 1675
PspEI GGTNACC 1 cut(s) 1052
PspGI CCWGG 3 cut(s) 173, 1651, 1675
PspN4I GGNNCC 7 cut(s) 20, 94, 791, 1040, 1125, 1176, 1530
PspPI GGNCC 3 cut(s) 751, 1174, 1528
PsrI GAACNNNNNNTAC 2 cut(s) 1478, 1510
PstNI CAGNNNCTG 1 cut(s) 1113
PsuI RGATCY 2 cut(s) 1123, 1219
PvuII CAGCTG 2 cut(s) 419, 809
RsaI GTAC 8 cut(s) 5, 170, 292, 746, 791, 989, 1040, 1487
RsaNI GTAC 8 cut(s) 4, 169, 291, 745, 790, 988, 1039, 1486
SaqAI TTAA 2 cut(s) 621, 1284
SatI GCNGC 8 cut(s) 57, 65, 103, 351, 417, 438, 627, 810
Sau3AI GATC 6 cut(s) 336, 529, 610, 727, 1123, 1219
Sau96I GGNCC 3 cut(s) 751, 1174, 1528
ScaI AGTACT 1 cut(s) 1487
ScrFI CCNGG 3 cut(s) 175, 1653, 1677
SduI GDGCHC 1 cut(s) 945
SfaNI GCATC 3 cut(s) 337, 926, 1348
SfcI CTRYAG 2 cut(s) 1345, 1645
SinI GGWCC 2 cut(s) 751, 1528
SmlI CTYRAG 3 cut(s) 227, 949, 1546
SmoI CTYRAG 3 cut(s) 227, 949, 1546
SphI GCATGC 1 cut(s) 279
SseBI AGGCCT 1 cut(s) 1289
SsiI CCGC 4 cut(s) 57, 391, 561, 776
SspI AATATT 1 cut(s) 1167
SspMI CTAG 2 cut(s) 680, 968
StuI AGGCCT 1 cut(s) 1289
StyD4I CCNGG 3 cut(s) 173, 1651, 1675
StyI CCWWGG 5 cut(s) 639, 663, 754, 871, 1057
TaaI ACNGT 6 cut(s) 125, 370, 409, 570, 1524, 1646
TaiI ACGT 4 cut(s) 170, 750, 846, 1279
TaqI TCGA 2 cut(s) 339, 829
TatI WGTACW 3 cut(s) 3, 290, 1485
TauI GCSGC 1 cut(s) 59
TfiI GAWTC 6 cut(s) 79, 329, 690, 1131, 1319, 1733
Tru1I TTAA 2 cut(s) 621, 1284
Tru9I TTAA 2 cut(s) 621, 1284
TscAI CASTG 3 cut(s) 724, 1039, 1649
TseFI GTSAC 2 cut(s) 163, 364
TseI GCWGC 7 cut(s) 64, 102, 350, 416, 437, 626, 809
Tsp45I GTSAC 2 cut(s) 163, 364
TspDTI ATGAA 6 cut(s) 291, 515, 783, 966, 1071, 1183
TspGWI ACGGA 3 cut(s) 37, 105, 1278
TspRI CASTG 3 cut(s) 724, 1039, 1649
Van91I CCANNNNNTGG 1 cut(s) 1049
VpaK11BI GGWCC 2 cut(s) 751, 1528
XapI RAATTY 5 cut(s) 298, 588, 770, 1181, 1237
XceI RCATGY 2 cut(s) 279, 1543
XcmI CCANNNNNNNNNTGG 4 cut(s) 268, 637, 646, 892
XmnI GAANNNNTTC 2 cut(s) 689, 1541
XspI CTAG 2 cut(s) 680, 968
ZrmI AGTACT 1 cut(s) 1487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.