pycom15g16660
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
11699383 .. 11699873
491 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 327 bp
ATGAAATGGAAAGATATGCCTGATTTTAAGGTTATGAACTTTCATTTGGAGGATGATCCTAATGCCGTCTTACAGGTAAAGGAGGAAGACCTCGGAACTGCTCACCGAAGACAAGAACAGCATATGATAGACATTGTTTGGGAGGAGATGAATCTGCTGGTTCAAGCTGATCAACCAGGCAACCCGATTGACGACTATATATGCAAATTGAATGCTATACTTTCTCAGAAGGCTTCAGGAATTCTTCAACTGCAGACTCAGTTGGCTAAATTCCTGTGGCATCTGAATCATCACAGCGTTTTAGTATCTTCTTCTTCAAGTAACTGA

Protein Analysis

109

Amino Acids

12.46

Weight (kDa)

5.34

Isoelectric Point (pI)

49.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020923)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15885
malus_domestica MD15G1185500.v1.1
pyrus_communis pycom15g16660
rosa_samantha Rh2AG397100 Rh2CG383600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 50
AcsI RAATTY 2 cut(s) 240, 269
AcuI CTGAAG 1 cut(s) 219
AgsI TTSAA 4 cut(s) 164, 211, 248, 318
AjnI CCWGG 1 cut(s) 175
AjuI GAANNNNNNNTTGG 2 cut(s) 29, 61
AluBI AGCT 1 cut(s) 167
AluI AGCT 1 cut(s) 167
AlwI GGATC 1 cut(s) 50
ApoI RAATTY 2 cut(s) 240, 269
AsuHPI GGTGA 1 cut(s) 95
BbsI GAAGAC 2 cut(s) 93, 115
BceAI ACGGC 1 cut(s) 50
BciT130I CCWGG 1 cut(s) 177
BclI TGATCA 1 cut(s) 169
BfmI CTRYAG 1 cut(s) 251
Bme1390I CCNGG 1 cut(s) 177
BmrFI CCNGG 1 cut(s) 177
BmsI GCATC 1 cut(s) 289
BpiI GAAGAC 2 cut(s) 93, 115
BsaJI CCNNGG 1 cut(s) 91
BseBI CCWGG 1 cut(s) 177
BseDI CCNNGG 1 cut(s) 91
BseGI GGATG 1 cut(s) 58
BseMII CTCAG 2 cut(s) 239, 272
BseRI GAGGAG 1 cut(s) 158
BsmI GAATGC 1 cut(s) 217
Bsp143I GATC 2 cut(s) 55, 169
BspCNI CTCAG 2 cut(s) 238, 271
BspMAI CTGCAG 1 cut(s) 255
BspPI GGATC 1 cut(s) 50
BssECI CCNNGG 1 cut(s) 91
BssMI GATC 2 cut(s) 55, 169
Bst2UI CCWGG 1 cut(s) 177
BstDEI CTNAG 2 cut(s) 225, 258
BstF5I GGATG 1 cut(s) 58
BstKTI GATC 2 cut(s) 58, 172
BstMBI GATC 2 cut(s) 55, 169
BstNI CCWGG 1 cut(s) 177
BstSCI CCNGG 1 cut(s) 175
BstSFI CTRYAG 1 cut(s) 251
BstV2I GAAGAC 2 cut(s) 93, 115
BtsCI GGATG 1 cut(s) 58
CviJI RGCY 3 cut(s) 167, 233, 266
CviKI_1 RGCY 3 cut(s) 167, 233, 266
DdeI CTNAG 2 cut(s) 225, 258
DpnI GATC 2 cut(s) 57, 171
DpnII GATC 2 cut(s) 55, 169
Eco57I CTGAAG 1 cut(s) 219
EcoRI GAATTC 1 cut(s) 240
EcoRII CCWGG 1 cut(s) 175
FaiI YATR 8 cut(s) 17, 35, 123, 125, 198, 200, 202, 218
FauNDI CATATG 1 cut(s) 123
FbaI TGATCA 1 cut(s) 169
FokI GGATG 1 cut(s) 65
HinfI GANTC 3 cut(s) 151, 256, 286
HphI GGTGA 1 cut(s) 95
Hpy188I TCNGA 3 cut(s) 95, 228, 285
Hpy188III TCNNGA 1 cut(s) 237
HpyAV CCTTC 1 cut(s) 223
HpyCH4V TGCA 2 cut(s) 204, 253
HpyF3I CTNAG 2 cut(s) 225, 258
Ksp22I TGATCA 1 cut(s) 169
Kzo9I GATC 2 cut(s) 55, 169
LpnPI CCDG 7 cut(s) 33, 59, 143, 162, 189, 222, 287
LweI GCATC 1 cut(s) 289
MaeIII GTNAC 1 cut(s) 320
MalI GATC 2 cut(s) 57, 171
MboI GATC 2 cut(s) 55, 169
MboII GAAGA 6 cut(s) 98, 120, 236, 300, 303, 306
MluCI AATT 3 cut(s) 206, 240, 269
MlyI GAGTC 1 cut(s) 250
MnlI CCTC 4 cut(s) 43, 76, 101, 136
MseI TTAA 1 cut(s) 27
MspR9I CCNGG 1 cut(s) 177
Mva1269I GAATGC 1 cut(s) 217
MvaI CCWGG 1 cut(s) 177
NdeI CATATG 1 cut(s) 123
NdeII GATC 2 cut(s) 55, 169
PctI GAATGC 1 cut(s) 217
PfeI GAWTC 2 cut(s) 151, 286
PleI GAGTC 1 cut(s) 250
PpsI GAGTC 1 cut(s) 250
Psp6I CCWGG 1 cut(s) 175
PspGI CCWGG 1 cut(s) 175
PstI CTGCAG 1 cut(s) 255
SaqAI TTAA 1 cut(s) 27
Sau3AI GATC 2 cut(s) 55, 169
SchI GAGTC 1 cut(s) 250
ScrFI CCNGG 1 cut(s) 177
SetI ASST 4 cut(s) 33, 78, 93, 169
SfaNI GCATC 1 cut(s) 289
SfcI CTRYAG 1 cut(s) 251
Sse9I AATT 3 cut(s) 206, 240, 269
StyD4I CCNGG 1 cut(s) 175
TasI AATT 3 cut(s) 206, 240, 269
TfiI GAWTC 2 cut(s) 151, 286
Tru1I TTAA 1 cut(s) 27
Tru9I TTAA 1 cut(s) 27
TspDTI ATGAA 4 cut(s) 17, 32, 50, 164
XapI RAATTY 2 cut(s) 240, 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.