pycom15g16870

Sulfate transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
11832892 .. 11837352
4461 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g16870.8

Sequence Viewer

Length: 1284 bp
ATGGCACGGAATGTCACGGAGGGAATAGCAATTGGAAGGAGCTTTGCCATAATGAGGAACGAACAAGTTGATGGGAATAAGGAAATGATAGCTTTTGGCTTCATGAACATTATTGGATCTTTCACCTCATGTTACTTGACTACTGGACCATTTTCAAAGACTGCGGTGAATTACAATGCGGGAGCAAGATCACAAATGACAAACGCAGTGATGGCACTTTTTATGATGTTCGTTCTTCTGTTCTTGGCTCCTCTCTTTAGTTACACCCCTCTTGTTGCTTTATCTGCAATTATTATGTCCGCCATGCTTGGACTCATCAAATACAATGAAGTCTATGAACTCTTCAAGGTTGACAAGTTTGACTTCGTCATCTGCATGGCTGCCGTTTTAGGTGTTGCCTTCATTAGCATGGACATCGGTCTCGGTATCTCAATCGTACTTGGTCTTGTGAGAGCTCTCCTTTATGTGGCTAGGCCTGGCACTTGTAAGCTTGGAAAAATACCAGACTCGGTTATTTACCGTGACATAGAGCAGTATCCAGAAGCTGCGAGGAATTCAGGAGTCCTGGTACTACAAATTGGCTCCCCAGTCTACTTTGCAAATGGCAACTATATAAGGGAAAGGATTTTGAGATGGGTTTGGGATGAGCAAGAACAATTAGATGCTAGCGGAGGCCAGCTTGAGCATGTCTTGCTCGAATTGTCAGGAGTTATAACCATCGATATGACTGGCATTGAAACGTTGGCGGAAGTACACAAAACCTTAGCTGCAAGAGGGATTAAGCTGGGAATAATAAACCCGAGGATTAAGGTGATGGAGAAAATACAAACGTCACATTTCGTAGACAAGATCGGAAAAGAAAATATCTACTTATCGATCGAGGATGCAATCGTAAATTGCAAGTTTTCGATTCGCAAGTCCAGTGAAGCCGAAGTCCAAACCCAAACATTATTTTGGACTCTGTTCCGAACTGAAAGTGCGAGCCCACAGGACTCACACCTCCATTCGAACTCTGCCTCCGGGCTCAATCCGCTTCCATCTCTGTACCGCCAAGGCCTTCCAGCTTCGCTCTTCGGAGCTCCGCACCGACTTCCTCGAGCTCCTTCATCTCCCAACTCACGGAAAATGCCTCTCCGGCTCGATATCAAGGCTGAAGGAGGAGATGAGCCCCTTGCTGTTGACTACACTTTTTCTTCGAGCATTGCAGACCATCTGAGAGCAGCATCTCTTGTGTCAGTCATGCAGTGTCAGGGAGCATGTATTCGAGACTTTGCGGCTTGGTAA

Protein Analysis

428

Amino Acids

46.98

Weight (kDa)

7.05

Isoelectric Point (pI)

35.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013850)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19600
fragaria_vesca FvH4_1g05160
malus_domestica MD15G1188100.v1.1
prunus_persica Prupe.7G228300_v2.0.a1
pyrus_communis pycom15g16870
rosa_chinensis RchiOBHm_Chr2g0090861
rosa_laevigata RLG00000016151
rosa_multiflora Rmu_sc0000792.1_g000008 Rmu_sc0003214.1_g000001
rosa_roxburghii Rroxscaffold_2G00150790
rosa_rugosa Rorug02G0010700
rosa_samantha Rh2AG056900 Rh2BG055400 Rh2CG057700 Rh2DG056300 Rh7BG227000
rosa_wichuraiana Rw2G005250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 713
AccI GTMKAC 2 cut(s) 591, 843
AciI CCGC 9 cut(s) 164, 179, 300, 669, 746, 1031, 1048, 1082, 1274
AclI AACGTT 1 cut(s) 740
AclWI GGATC 1 cut(s) 124
AcsI RAATTY 1 cut(s) 553
AcuI CTGAAG 1 cut(s) 1173
AfaI GTAC 4 cut(s) 438, 570, 753, 1046
AfiI CCNNNNNNNGG 3 cut(s) 54, 466, 1119
AgsI TTSAA 3 cut(s) 156, 346, 737
AjnI CCWGG 2 cut(s) 475, 564
AloI GAACNNNNNNTCC 2 cut(s) 1001, 1033
Alw21I GWGCWC 3 cut(s) 457, 1081, 1102
Alw26I GTCTC 2 cut(s) 425, 1260
AlwI GGATC 1 cut(s) 124
AlwNI CAGNNNCTG 1 cut(s) 545
Ama87I CYCGRG 2 cut(s) 799, 1095
AoxI GGCC 3 cut(s) 473, 673, 1054
ApeKI GCWGC 4 cut(s) 380, 545, 767, 1220
ApoI RAATTY 1 cut(s) 553
AspS9I GGNCC 1 cut(s) 146
AsuC2I CCSGG 1 cut(s) 1021
AsuHPI GGTGA 3 cut(s) 115, 178, 823
AsuII TTCGAA 1 cut(s) 1007
AsuNHI GCTAGC 1 cut(s) 665
AvaI CYCGRG 2 cut(s) 799, 1095
AvaII GGWCC 1 cut(s) 146
BanII GRGCYC 6 cut(s) 457, 986, 1026, 1081, 1102, 1170
Bbv12I GWGCWC 3 cut(s) 457, 1081, 1102
BbvI GCAGC 4 cut(s) 367, 532, 754, 1232
BccI CCATC 7 cut(s) 65, 205, 627, 725, 808, 1045, 1218
BceAI ACGGC 1 cut(s) 368
BcgI CGANNNNNNTGC 2 cut(s) 397, 431
BciT130I CCWGG 2 cut(s) 477, 566
BciVI GTATCC 1 cut(s) 546
BcnI CCSGG 1 cut(s) 1021
BcoDI GTCTC 2 cut(s) 425, 1260
BfaI CTAG 2 cut(s) 471, 666
BfuI GTATCC 1 cut(s) 546
BglI GCCNNNNNGGC 1 cut(s) 1135
BisI GCNGC 5 cut(s) 381, 546, 768, 1221, 1275
BlsI GCNGC 5 cut(s) 382, 547, 769, 1222, 1276
Bme1390I CCNGG 3 cut(s) 477, 566, 1021
Bme18I GGWCC 1 cut(s) 146
BmeT110I CYCGRG 2 cut(s) 799, 1095
BmgT120I GGNCC 1 cut(s) 146
BmiI GGNNCC 2 cut(s) 249, 583
BmrFI CCNGG 3 cut(s) 477, 566, 1021
BmrI ACTGGG 1 cut(s) 581
BmsI GCATC 3 cut(s) 652, 874, 1232
BmtI GCTAGC 1 cut(s) 669
BmuI ACTGGG 1 cut(s) 581
BoxI GACNNNNGTC 1 cut(s) 417
Bpu10I CCTNAGC 1 cut(s) 763
Bpu14I TTCGAA 1 cut(s) 1007
BpuEI CTTGAG 1 cut(s) 701
BpuMI CCSGG 1 cut(s) 1021
Bsa29I ATCGAT 2 cut(s) 720, 875
BsaI GGTCTC 1 cut(s) 425
BsaJI CCNNGG 2 cut(s) 800, 1051
BsaXI ACNNNNNCTCC 4 cut(s) 552, 582, 1001, 1031
Bsc4I CCNNNNNNNGG 3 cut(s) 54, 466, 1119
Bse1I ACTGG 4 cut(s) 148, 587, 733, 921
Bse3DI GCAATG 1 cut(s) 1200
BseBI CCWGG 2 cut(s) 477, 566
BseCI ATCGAT 2 cut(s) 720, 875
BseDI CCNNGG 2 cut(s) 800, 1051
BseGI GGATG 2 cut(s) 649, 889
BseLI CCNNNNNNNGG 3 cut(s) 54, 466, 1119
BseMI GCAATG 1 cut(s) 1200
BseMII CTCAG 1 cut(s) 1205
BseNI ACTGG 4 cut(s) 148, 587, 733, 921
BseRI GAGGAG 2 cut(s) 240, 1173
BseXI GCAGC 4 cut(s) 367, 532, 754, 1232
BseYI CCCAGC 1 cut(s) 784
Bsh1285I CGRYCG 1 cut(s) 879
BshFI GGCC 3 cut(s) 475, 675, 1056
BshVI ATCGAT 2 cut(s) 720, 875
BsiEI CGRYCG 1 cut(s) 879
BsiHKAI GWGCWC 3 cut(s) 457, 1081, 1102
BsiHKCI CYCGRG 2 cut(s) 799, 1095
BsiSI CCGG 2 cut(s) 1020, 1135
BslI CCNNNNNNNGG 3 cut(s) 54, 466, 1119
BsmAI GTCTC 2 cut(s) 425, 1260
BsnI GGCC 3 cut(s) 475, 675, 1056
Bso31I GGTCTC 1 cut(s) 425
BsoBI CYCGRG 2 cut(s) 799, 1095
Bsp119I TTCGAA 1 cut(s) 1007
Bsp1286I GDGCHC 6 cut(s) 457, 986, 1026, 1081, 1102, 1170
Bsp143I GATC 4 cut(s) 116, 188, 849, 876
BspACI CCGC 9 cut(s) 164, 179, 300, 669, 746, 1031, 1048, 1082, 1274
BspANI GGCC 3 cut(s) 475, 675, 1056
BspCNI CTCAG 1 cut(s) 1206
BspDI ATCGAT 2 cut(s) 720, 875
BspHI TCATGA 1 cut(s) 102
BspLI GGNNCC 2 cut(s) 249, 583
BspOI GCTAGC 1 cut(s) 669
BspPI GGATC 1 cut(s) 124
BspQI GCTCTTC 1 cut(s) 1076
BspT104I TTCGAA 1 cut(s) 1007
BspTNI GGTCTC 1 cut(s) 425
BsrDI GCAATG 1 cut(s) 1200
BsrI ACTGG 4 cut(s) 148, 587, 733, 921
BssECI CCNNGG 2 cut(s) 800, 1051
BssMI GATC 4 cut(s) 116, 188, 849, 876
BssT1I CCWWGG 1 cut(s) 1051
Bst2UI CCWGG 2 cut(s) 477, 566
Bst4CI ACNGT 1 cut(s) 521
Bst6I CTCTTC 2 cut(s) 347, 1076
BstAPI GCANNNNNTGC 1 cut(s) 691
BstBI TTCGAA 1 cut(s) 1007
BstC8I GCNNGC 3 cut(s) 667, 677, 982
BstDEI CTNAG 2 cut(s) 763, 1214
BstF5I GGATG 2 cut(s) 649, 889
BstKTI GATC 4 cut(s) 119, 191, 852, 879
BstMAI GTCTC 2 cut(s) 425, 1260
BstMBI GATC 4 cut(s) 116, 188, 849, 876
BstMCI CGRYCG 1 cut(s) 879
BstMWI GCNNNNNNNGC 5 cut(s) 212, 284, 691, 1030, 1135
BstNI CCWGG 2 cut(s) 477, 566
BstNSI RCATGY 2 cut(s) 689, 1260
BstPAI GACNNNNGTC 1 cut(s) 417
BstSCI CCNGG 3 cut(s) 475, 564, 1019
BstV1I GCAGC 4 cut(s) 367, 532, 754, 1232
BstX2I RGATCY 1 cut(s) 116
BstYI RGATCY 1 cut(s) 116
Bsu15I ATCGAT 2 cut(s) 720, 875
BsuI GTATCC 1 cut(s) 546
BsuRI GGCC 3 cut(s) 475, 675, 1056
BsuTUI ATCGAT 2 cut(s) 720, 875
BtsCI GGATG 2 cut(s) 649, 889
BtsI GCAGTG 2 cut(s) 213, 1250
BtsIMutI CAGTG 3 cut(s) 213, 928, 1250
Cac8I GCNNGC 3 cut(s) 667, 677, 982
CaiI CAGNNNCTG 1 cut(s) 545
CciI TCATGA 1 cut(s) 102
Cfr13I GGNCC 1 cut(s) 146
ClaI ATCGAT 2 cut(s) 720, 875
Csp6I GTAC 4 cut(s) 437, 569, 752, 1045
CviAII CATG 8 cut(s) 103, 129, 304, 376, 409, 686, 1240, 1257
CviQI GTAC 4 cut(s) 437, 569, 752, 1045
DdeI CTNAG 2 cut(s) 763, 1214
DpnI GATC 4 cut(s) 118, 190, 851, 878
DpnII GATC 4 cut(s) 116, 188, 849, 876
Eam1104I CTCTTC 2 cut(s) 347, 1076
EarI CTCTTC 2 cut(s) 347, 1076
EciI GGCGGA 2 cut(s) 289, 761
Ecl136II GAGCTC 3 cut(s) 455, 1079, 1100
Eco130I CCWWGG 1 cut(s) 1051
Eco147I AGGCCT 2 cut(s) 475, 1056
Eco24I GRGCYC 6 cut(s) 457, 986, 1026, 1081, 1102, 1170
Eco31I GGTCTC 1 cut(s) 425
Eco32I GATATC 1 cut(s) 1144
Eco47I GGWCC 1 cut(s) 146
Eco53kI GAGCTC 3 cut(s) 455, 1079, 1100
Eco57I CTGAAG 1 cut(s) 1173
Eco88I CYCGRG 2 cut(s) 799, 1095
EcoICRI GAGCTC 3 cut(s) 455, 1079, 1100
EcoRI GAATTC 1 cut(s) 553
EcoRII CCWGG 2 cut(s) 475, 564
EcoRV GATATC 1 cut(s) 1144
EcoT14I CCWWGG 1 cut(s) 1051
EcoT38I GRGCYC 6 cut(s) 457, 986, 1026, 1081, 1102, 1170
ErhI CCWWGG 1 cut(s) 1051
FaeI CATG 8 cut(s) 106, 132, 307, 379, 412, 689, 1243, 1260
FalI AAGNNNNNCTT 2 cut(s) 347, 379
FatI CATG 8 cut(s) 102, 128, 303, 375, 408, 685, 1239, 1256
FauI CCCGC 1 cut(s) 172
FblI GTMKAC 2 cut(s) 591, 843
Fnu4HI GCNGC 5 cut(s) 381, 546, 768, 1221, 1275
FokI GGATG 2 cut(s) 656, 896
FriOI GRGCYC 6 cut(s) 457, 986, 1026, 1081, 1102, 1170
Fsp4HI GCNGC 5 cut(s) 381, 546, 768, 1221, 1275
FspBI CTAG 2 cut(s) 471, 666
GluI GCNGC 5 cut(s) 381, 546, 768, 1221, 1275
GsaI CCCAGC 1 cut(s) 788
HaeIII GGCC 3 cut(s) 475, 675, 1056
HapII CCGG 2 cut(s) 1020, 1135
Hin1II CATG 8 cut(s) 106, 132, 307, 379, 412, 689, 1243, 1260
HincII GTYRAC 2 cut(s) 352, 1180
HindII GTYRAC 2 cut(s) 352, 1180
HindIII AAGCTT 1 cut(s) 488
HinfI GANTC 6 cut(s) 312, 506, 561, 910, 958, 992
HpaII CCGG 2 cut(s) 1020, 1135
HphI GGTGA 3 cut(s) 115, 178, 823
Hpy166II GTNNAC 5 cut(s) 352, 592, 754, 844, 1180
Hpy188I TCNGA 4 cut(s) 854, 968, 1076, 1215
Hpy188III TCNNGA 5 cut(s) 103, 539, 558, 705, 1265
Hpy8I GTNNAC 5 cut(s) 352, 592, 754, 844, 1180
HpyAV CCTTC 5 cut(s) 30, 409, 1067, 1113, 1148
HpyCH4III ACNGT 1 cut(s) 521
HpyCH4IV ACGT 2 cut(s) 740, 830
HpyCH4V TGCA 8 cut(s) 287, 375, 599, 770, 887, 900, 1205, 1243
HpyF10VI GCNNNNNNNGC 5 cut(s) 212, 284, 691, 1030, 1135
HpyF3I CTNAG 2 cut(s) 763, 1214
HpySE526I ACGT 2 cut(s) 740, 830
Hsp92II CATG 8 cut(s) 106, 132, 307, 379, 412, 689, 1243, 1260
Kzo9I GATC 4 cut(s) 116, 188, 849, 876
LguI GCTCTTC 1 cut(s) 1076
LmnI GCTCC 8 cut(s) 39, 182, 253, 587, 1076, 1084, 1105, 1253
Lsp1109I GCAGC 4 cut(s) 367, 532, 754, 1232
LweI GCATC 3 cut(s) 652, 874, 1232
MaeI CTAG 2 cut(s) 471, 666
MaeII ACGT 2 cut(s) 740, 830
MaeIII GTNAC 5 cut(s) 13, 131, 260, 521, 831
MalI GATC 4 cut(s) 118, 190, 851, 878
MboI GATC 4 cut(s) 116, 188, 849, 876
MboII GAAGA 4 cut(s) 227, 334, 1063, 1185
MfeI CAATTG 1 cut(s) 30
MflI RGATCY 1 cut(s) 116
MhlI GDGCHC 6 cut(s) 457, 986, 1026, 1081, 1102, 1170
MluCI AATT 8 cut(s) 30, 169, 288, 553, 576, 656, 698, 895
MlyI GAGTC 5 cut(s) 306, 500, 570, 952, 986
MseI TTAA 2 cut(s) 780, 807
MslI CAYNNNNRTG 3 cut(s) 374, 407, 722
MspI CCGG 2 cut(s) 1020, 1135
MspR9I CCNGG 3 cut(s) 477, 566, 1021
MunI CAATTG 1 cut(s) 30
MvaI CCWGG 2 cut(s) 477, 566
MwoI GCNNNNNNNGC 5 cut(s) 212, 284, 691, 1030, 1135
NciI CCSGG 1 cut(s) 1021
NdeII GATC 4 cut(s) 116, 188, 849, 876
NheI GCTAGC 1 cut(s) 665
NlaIII CATG 8 cut(s) 106, 132, 307, 379, 412, 689, 1243, 1260
NlaIV GGNNCC 2 cut(s) 249, 583
NmuCI GTSAC 3 cut(s) 13, 521, 831
NspI RCATGY 2 cut(s) 689, 1260
NspV TTCGAA 1 cut(s) 1007
PaeR7I CTCGAG 1 cut(s) 1095
PagI TCATGA 1 cut(s) 102
PceI AGGCCT 2 cut(s) 475, 1056
PciSI GCTCTTC 1 cut(s) 1076
PfeI GAWTC 1 cut(s) 910
PflFI GACNNNGTC 1 cut(s) 365
PkrI GCNGC 5 cut(s) 382, 547, 769, 1222, 1276
Ple19I CGATCG 1 cut(s) 879
PleI GAGTC 5 cut(s) 306, 500, 569, 952, 986
PpsI GAGTC 5 cut(s) 306, 500, 569, 952, 986
PshAI GACNNNNGTC 1 cut(s) 417
PsiI TTATAA 1 cut(s) 713
Psp124BI GAGCTC 3 cut(s) 457, 1081, 1102
Psp1406I AACGTT 1 cut(s) 740
Psp6I CCWGG 2 cut(s) 475, 564
PspFI CCCAGC 1 cut(s) 784
PspGI CCWGG 2 cut(s) 475, 564
PspN4I GGNNCC 2 cut(s) 249, 583
PspPI GGNCC 1 cut(s) 146
PspXI VCTCGAGB 1 cut(s) 1095
PstNI CAGNNNCTG 1 cut(s) 545
PsuI RGATCY 1 cut(s) 116
PsyI GACNNNGTC 1 cut(s) 365
PvuI CGATCG 1 cut(s) 879
RsaI GTAC 4 cut(s) 438, 570, 753, 1046
RsaNI GTAC 4 cut(s) 437, 569, 752, 1045
RseI CAYNNNNRTG 3 cut(s) 374, 407, 722
SacI GAGCTC 3 cut(s) 457, 1081, 1102
SapI GCTCTTC 1 cut(s) 1076
SaqAI TTAA 2 cut(s) 780, 807
SatI GCNGC 5 cut(s) 381, 546, 768, 1221, 1275
Sau3AI GATC 4 cut(s) 116, 188, 849, 876
Sau96I GGNCC 1 cut(s) 146
SchI GAGTC 5 cut(s) 306, 500, 570, 952, 986
ScrFI CCNGG 3 cut(s) 477, 566, 1021
SduI GDGCHC 6 cut(s) 457, 986, 1026, 1081, 1102, 1170
SfaNI GCATC 3 cut(s) 652, 874, 1232
Sfr274I CTCGAG 1 cut(s) 1095
SfuI TTCGAA 1 cut(s) 1007
SinI GGWCC 1 cut(s) 146
SlaI CTCGAG 1 cut(s) 1095
SmiMI CAYNNNNRTG 3 cut(s) 374, 407, 722
SmlI CTYRAG 2 cut(s) 680, 1095
SmoI CTYRAG 2 cut(s) 680, 1095
Sse9I AATT 8 cut(s) 30, 169, 288, 553, 576, 656, 698, 895
SseBI AGGCCT 2 cut(s) 475, 1056
SsiI CCGC 9 cut(s) 164, 179, 300, 669, 746, 1031, 1048, 1082, 1274
SspMI CTAG 2 cut(s) 471, 666
SstI GAGCTC 3 cut(s) 457, 1081, 1102
StuI AGGCCT 2 cut(s) 475, 1056
StyD4I CCNGG 3 cut(s) 475, 564, 1019
StyI CCWWGG 1 cut(s) 1051
TaaI ACNGT 1 cut(s) 521
TaiI ACGT 2 cut(s) 743, 833
TaqII GACCGA 1 cut(s) 407
TasI AATT 8 cut(s) 30, 169, 288, 553, 576, 656, 698, 895
TatI WGTACW 1 cut(s) 751
TauI GCSGC 1 cut(s) 1277
TfiI GAWTC 1 cut(s) 910
Tru1I TTAA 2 cut(s) 780, 807
Tru9I TTAA 2 cut(s) 780, 807
TscAI CASTG 3 cut(s) 213, 928, 1250
TseFI GTSAC 3 cut(s) 13, 521, 831
TseI GCWGC 4 cut(s) 380, 545, 767, 1220
Tsp45I GTSAC 3 cut(s) 13, 521, 831
TspDTI ATGAA 6 cut(s) 91, 119, 342, 351, 391, 1095
TspGWI ACGGA 3 cut(s) 22, 32, 1135
TspRI CASTG 3 cut(s) 213, 928, 1250
Tth111I GACNNNGTC 1 cut(s) 365
VpaK11BI GGWCC 1 cut(s) 146
XapI RAATTY 1 cut(s) 553
XceI RCATGY 2 cut(s) 689, 1260
XhoI CTCGAG 1 cut(s) 1095
XmiI GTMKAC 2 cut(s) 591, 843
XspI CTAG 2 cut(s) 471, 666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.