pycom15g19210

MOB kinase activator-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0015904
Physical Location & Seq
Forward (+)
13690828 .. 13693529
2702 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 651 bp
ATGAGTCTCTTTGGCCTGGGAAGCAGAAACCAGAAGACATTCCGGCCGAAAAAGAGCGCTCCATCCGGTAGCAAGGGTGCCCAGCTTCAGAAACACATTGATGCTACCTTGGGCAGTGGCAACCTGAGGGAGGCGGTTCGTCTGCCTCCCGGCGAAGATATAAACGAATGGCTGGCAGTAAACACTGTTGATTTTTTCAACCAAGTGAACATTCTATATGGAACTCTCACGGAGTTCTGCACGCCAGTCACTTGTCCGACAATGTCTGCGGGGCCAAAGTATGAGTACAGATGGGCTGATGGAGTTACAATCAAGAAACCAATTGAGGTCTCTGCTCCAAAATATGTCGAGTATCTAATGGACTGGATCGAAGTTCAGCTCGATGAGGAATCCATCTTTCCTCAAAGATTGGGAGCACCCTTTCCATCCAATTTCCAAGATGTCGTCAAGACCATTTTTAAGCGATTGTTTCGTGTTTACGCGCATATCTACCATTCTCATTTCCAGAAAATTGTGAGCTTGAAGGAAGAAGCTCACCTGAACACCTGCTTCAAGCACTTTGTTCTCTTCACATCGGAATTCCGCTTGATCGAAAAAGGGGAGCTTGCGCCTCTTCAGGACCTGGTTGAGTCGATTCTACAGCCTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04111 ko04390 ko04391 ko04392 map04111 map04390 map04391 map04392
Pfam Domains
Protein Families
Mob1_phocein

Protein Analysis

217

Amino Acids

24.64

Weight (kDa)

7.73

Isoelectric Point (pI)

50.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mob1_phocein PF03637 35 - 205 4e-80 Mob1/phocein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015904)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G45550
fragaria_vesca FvH4_1g08580
malus_domestica MD02G1090000.v1.1 MD15G1216600.v1.1
prunus_persica Prupe.7G200000_v2.0.a1
pyrus_communis pycom02g07190 pycom15g19210
rosa_chinensis RchiOBHm_Chr2g0094801
rosa_laevigata RLG00000016522
rosa_multiflora Rmu_sc0006422.1_g000025
rosa_roxburghii Rroxscaffold_2G00146870
rosa_rugosa Rorug02G0047100
rosa_samantha Rh2AG094500 Rh2BG095100 Rh2DG093900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 554
Acc36I ACCTGC 1 cut(s) 554
AccB1I GGYRCC 1 cut(s) 77
AccII CGCG 1 cut(s) 482
AciI CCGC 3 cut(s) 134, 269, 583
AclWI GGATC 1 cut(s) 374
AcoI YGGCCR 1 cut(s) 44
AcsI RAATTY 1 cut(s) 578
AcuI CTGAAG 2 cut(s) 71, 599
AfaI GTAC 1 cut(s) 287
AfeI AGCGCT 1 cut(s) 58
AfiI CCNNNNNNNGG 1 cut(s) 130
AgsI TTSAA 3 cut(s) 199, 523, 553
AjnI CCWGG 2 cut(s) 15, 621
AjuI GAANNNNNNNTTGG 2 cut(s) 195, 227
AluBI AGCT 5 cut(s) 85, 379, 519, 533, 604
AluI AGCT 5 cut(s) 85, 379, 519, 533, 604
Alw21I GWGCWC 1 cut(s) 418
Alw26I GTCTC 2 cut(s) 11, 334
AlwI GGATC 1 cut(s) 374
AlwNI CAGNNNCTG 1 cut(s) 622
Aor51HI AGCGCT 1 cut(s) 58
AoxI GGCC 3 cut(s) 13, 44, 272
ApoI RAATTY 1 cut(s) 578
Asp700I GAANNNNTTC 1 cut(s) 38
AspLEI GCGC 3 cut(s) 59, 484, 610
AspS9I GGNCC 2 cut(s) 272, 619
AsuC2I CCSGG 1 cut(s) 150
AsuHPI GGTGA 1 cut(s) 527
AvaII GGWCC 1 cut(s) 619
AxyI CCTNAGG 1 cut(s) 125
BaeGI GKGCMC 1 cut(s) 82
BanI GGYRCC 1 cut(s) 77
BbsI GAAGAC 1 cut(s) 41
Bbv12I GWGCWC 1 cut(s) 418
BccI CCATC 5 cut(s) 70, 285, 293, 401, 433
BciT130I CCWGG 2 cut(s) 17, 623
BcnI CCSGG 1 cut(s) 150
BcoDI GTCTC 2 cut(s) 11, 334
BfmI CTRYAG 1 cut(s) 638
BfoI RGCGCY 1 cut(s) 60
BfuAI ACCTGC 1 cut(s) 554
Bme1390I CCNGG 3 cut(s) 17, 150, 623
Bme18I GGWCC 1 cut(s) 619
BmgT120I GGNCC 2 cut(s) 272, 619
BmiI GGNNCC 2 cut(s) 79, 273
BmrFI CCNGG 3 cut(s) 17, 150, 623
BmsI GCATC 1 cut(s) 91
BpiI GAAGAC 1 cut(s) 41
BpuMI CCSGG 1 cut(s) 150
BsaI GGTCTC 1 cut(s) 334
BsaJI CCNNGG 2 cut(s) 16, 108
BsaWI WCCGGW 1 cut(s) 65
Bsc4I CCNNNNNNNGG 1 cut(s) 130
Bse1I ACTGG 2 cut(s) 245, 368
Bse21I CCTNAGG 1 cut(s) 125
BseBI CCWGG 2 cut(s) 17, 623
BseDI CCNNGG 2 cut(s) 16, 108
BseGI GGATG 2 cut(s) 62, 425
BseLI CCNNNNNNNGG 1 cut(s) 130
BseMII CTCAG 1 cut(s) 116
BseNI ACTGG 2 cut(s) 245, 368
BseSI GKGCMC 1 cut(s) 82
BseX3I CGGCCG 1 cut(s) 44
BseYI CCCAGC 1 cut(s) 81
BsgI GTGCAG 1 cut(s) 223
Bsh1236I CGCG 1 cut(s) 482
Bsh1285I CGRYCG 1 cut(s) 47
BshFI GGCC 3 cut(s) 15, 46, 274
BshNI GGYRCC 1 cut(s) 77
BsiEI CGRYCG 1 cut(s) 47
BsiHKAI GWGCWC 1 cut(s) 418
BsiSI CCGG 3 cut(s) 43, 66, 150
BslI CCNNNNNNNGG 1 cut(s) 130
BsmAI GTCTC 2 cut(s) 11, 334
BsnI GGCC 3 cut(s) 15, 46, 274
Bso31I GGTCTC 1 cut(s) 334
Bsp1286I GDGCHC 2 cut(s) 82, 418
Bsp143I GATC 2 cut(s) 366, 588
BspACI CCGC 3 cut(s) 134, 269, 583
BspANI GGCC 3 cut(s) 15, 46, 274
BspCNI CTCAG 1 cut(s) 117
BspFNI CGCG 1 cut(s) 482
BspLI GGNNCC 2 cut(s) 79, 273
BspMI ACCTGC 1 cut(s) 554
BspPI GGATC 1 cut(s) 374
BspT107I GGYRCC 1 cut(s) 77
BspTNI GGTCTC 1 cut(s) 334
BsrI ACTGG 2 cut(s) 245, 368
BssECI CCNNGG 2 cut(s) 16, 108
BssMI GATC 2 cut(s) 366, 588
BssT1I CCWWGG 1 cut(s) 108
Bst2UI CCWGG 2 cut(s) 17, 623
Bst4CI ACNGT 1 cut(s) 187
Bst6I CTCTTC 2 cut(s) 572, 618
BstC8I GCNNGC 3 cut(s) 174, 242, 606
BstDEI CTNAG 2 cut(s) 125, 645
BstENI CCTNNNNNAGG 1 cut(s) 128
BstF5I GGATG 2 cut(s) 62, 425
BstFNI CGCG 1 cut(s) 482
BstH2I RGCGCY 1 cut(s) 60
BstHHI GCGC 3 cut(s) 59, 484, 610
BstKTI GATC 2 cut(s) 369, 591
BstMAI GTCTC 2 cut(s) 11, 334
BstMBI GATC 2 cut(s) 366, 588
BstMCI CGRYCG 1 cut(s) 47
BstMWI GCNNNNNNNGC 1 cut(s) 21
BstNI CCWGG 2 cut(s) 17, 623
BstSCI CCNGG 3 cut(s) 15, 148, 621
BstSFI CTRYAG 1 cut(s) 638
BstSLI GKGCMC 1 cut(s) 82
BstUI CGCG 1 cut(s) 482
BstV2I GAAGAC 1 cut(s) 41
BstZI CGGCCG 1 cut(s) 44
Bsu36I CCTNAGG 1 cut(s) 125
BsuRI GGCC 3 cut(s) 15, 46, 274
BtsCI GGATG 2 cut(s) 62, 425
BtsI GCAGTG 1 cut(s) 121
BtsIMutI CAGTG 2 cut(s) 121, 183
BveI ACCTGC 1 cut(s) 554
Cac8I GCNNGC 3 cut(s) 174, 242, 606
CaiI CAGNNNCTG 1 cut(s) 622
CfoI GCGC 3 cut(s) 59, 484, 610
Cfr13I GGNCC 2 cut(s) 272, 619
CsiI ACCWGGT 1 cut(s) 621
Csp6I GTAC 1 cut(s) 286
CviQI GTAC 1 cut(s) 286
DdeI CTNAG 2 cut(s) 125, 645
DpnI GATC 2 cut(s) 368, 590
DpnII GATC 2 cut(s) 366, 588
EaeI YGGCCR 1 cut(s) 44
EagI CGGCCG 1 cut(s) 44
Eam1104I CTCTTC 2 cut(s) 572, 618
EarI CTCTTC 2 cut(s) 572, 618
EclXI CGGCCG 1 cut(s) 44
Eco130I CCWWGG 1 cut(s) 108
Eco31I GGTCTC 1 cut(s) 334
Eco47I GGWCC 1 cut(s) 619
Eco47III AGCGCT 1 cut(s) 58
Eco52I CGGCCG 1 cut(s) 44
Eco57I CTGAAG 2 cut(s) 71, 599
Eco81I CCTNAGG 1 cut(s) 125
EcoNI CCTNNNNNAGG 1 cut(s) 128
EcoO109I RGGNCCY 1 cut(s) 619
EcoRI GAATTC 1 cut(s) 578
EcoRII CCWGG 2 cut(s) 15, 621
EcoT14I CCWWGG 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 108
FaiI YATR 6 cut(s) 161, 217, 219, 282, 345, 486
FalI AAGNNNNNCTT 2 cut(s) 588, 620
FauI CCCGC 1 cut(s) 262
FokI GGATG 2 cut(s) 49, 412
GlaI GCGC 3 cut(s) 58, 483, 609
GsaI CCCAGC 1 cut(s) 85
HaeII RGCGCY 1 cut(s) 60
HaeIII GGCC 3 cut(s) 15, 46, 274
HapII CCGG 3 cut(s) 43, 66, 150
HhaI GCGC 3 cut(s) 59, 484, 610
Hin6I GCGC 3 cut(s) 57, 482, 608
HinP1I GCGC 3 cut(s) 57, 482, 608
HinfI GANTC 4 cut(s) 4, 389, 629, 634
HpaII CCGG 3 cut(s) 43, 66, 150
HphI GGTGA 1 cut(s) 527
Hpy166II GTNNAC 3 cut(s) 181, 208, 478
Hpy188I TCNGA 3 cut(s) 90, 258, 577
Hpy188III TCNNGA 4 cut(s) 313, 448, 505, 617
Hpy8I GTNNAC 3 cut(s) 181, 208, 478
HpyAV CCTTC 1 cut(s) 517
HpyCH4III ACNGT 1 cut(s) 187
HpyCH4V TGCA 1 cut(s) 240
HpyF10VI GCNNNNNNNGC 1 cut(s) 21
HpyF3I CTNAG 2 cut(s) 125, 645
HspAI GCGC 3 cut(s) 57, 482, 608
Kzo9I GATC 2 cut(s) 366, 588
LmnI GCTCC 4 cut(s) 64, 340, 413, 601
LweI GCATC 1 cut(s) 91
MabI ACCWGGT 1 cut(s) 621
MaeIII GTNAC 2 cut(s) 247, 304
MalI GATC 2 cut(s) 368, 590
MboI GATC 2 cut(s) 366, 588
MboII GAAGA 5 cut(s) 46, 167, 539, 559, 605
MfeI CAATTG 1 cut(s) 321
MhlI GDGCHC 2 cut(s) 82, 418
MluCI AATT 4 cut(s) 321, 430, 510, 578
MlyI GAGTC 2 cut(s) 13, 638
MmeI TCCRAC 1 cut(s) 281
MnlI CCTC 7 cut(s) 120, 124, 156, 319, 379, 411, 621
MroXI GAANNNNTTC 1 cut(s) 38
MseI TTAA 1 cut(s) 459
MslI CAYNNNNRTG 1 cut(s) 99
MspI CCGG 3 cut(s) 43, 66, 150
MspR9I CCNGG 3 cut(s) 17, 150, 623
MunI CAATTG 1 cut(s) 321
MvaI CCWGG 2 cut(s) 17, 623
MvnI CGCG 1 cut(s) 482
MwoI GCNNNNNNNGC 1 cut(s) 21
NciI CCSGG 1 cut(s) 150
NdeII GATC 2 cut(s) 366, 588
NlaIV GGNNCC 2 cut(s) 79, 273
NmuCI GTSAC 1 cut(s) 247
PaqCI CACCTGC 1 cut(s) 554
PdmI GAANNNNTTC 1 cut(s) 38
PfeI GAWTC 2 cut(s) 389, 634
PflFI GACNNNGTC 1 cut(s) 262
PleI GAGTC 2 cut(s) 12, 637
PpsI GAGTC 2 cut(s) 12, 637
PpuMI RGGWCCY 1 cut(s) 619
Psp5II RGGWCCY 1 cut(s) 619
Psp6I CCWGG 2 cut(s) 15, 621
PspFI CCCAGC 1 cut(s) 81
PspGI CCWGG 2 cut(s) 15, 621
PspN4I GGNNCC 2 cut(s) 79, 273
PspPI GGNCC 2 cut(s) 272, 619
PspPPI RGGWCCY 1 cut(s) 619
PstNI CAGNNNCTG 1 cut(s) 622
PsyI GACNNNGTC 1 cut(s) 262
RsaI GTAC 1 cut(s) 287
RsaNI GTAC 1 cut(s) 286
RseI CAYNNNNRTG 1 cut(s) 99
SaqAI TTAA 1 cut(s) 459
Sau3AI GATC 2 cut(s) 366, 588
Sau96I GGNCC 2 cut(s) 272, 619
SchI GAGTC 2 cut(s) 13, 638
ScrFI CCNGG 3 cut(s) 17, 150, 623
SduI GDGCHC 2 cut(s) 82, 418
SexAI ACCWGGT 1 cut(s) 621
SfaNI GCATC 1 cut(s) 91
SfcI CTRYAG 1 cut(s) 638
SinI GGWCC 1 cut(s) 619
SmiMI CAYNNNNRTG 1 cut(s) 99
Sse9I AATT 4 cut(s) 321, 430, 510, 578
SsiI CCGC 3 cut(s) 134, 269, 583
StyD4I CCNGG 3 cut(s) 15, 148, 621
StyI CCWWGG 1 cut(s) 108
TaaI ACNGT 1 cut(s) 187
TaqI TCGA 5 cut(s) 348, 369, 381, 591, 632
TasI AATT 4 cut(s) 321, 430, 510, 578
TatI WGTACW 1 cut(s) 285
TfiI GAWTC 2 cut(s) 389, 634
Tru1I TTAA 1 cut(s) 459
Tru9I TTAA 1 cut(s) 459
TscAI CASTG 2 cut(s) 121, 190
TseFI GTSAC 1 cut(s) 247
Tsp45I GTSAC 1 cut(s) 247
TspGWI ACGGA 1 cut(s) 245
TspRI CASTG 2 cut(s) 121, 190
Tth111I GACNNNGTC 1 cut(s) 262
VpaK11BI GGWCC 1 cut(s) 619
XagI CCTNNNNNAGG 1 cut(s) 128
XapI RAATTY 1 cut(s) 578
XmnI GAANNNNTTC 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.