pycom15g20110
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0024617
Physical Location & Seq
Forward (+)
14364179 .. 14366405
2227 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g20110.1

Sequence Viewer

Length: 1233 bp
ATGCAAGGAGCTCAACTAGCTGAGATAGAAGCGCTTTACAAAGAAGAACAACTTTTGAGGAAGCGATATTTTAATACTATAGAAGATATGAAAGGCAAGATTAGAGTCTTCTGTCGGTTAAGACCTTTGAGTGCAAAAGAAATTACAGAAAAGGAAAGAGATGCAGTTAAAAGTGTAGATGAGTTCACAATTGAACATCCATGGAAGGATGACAAATTGAAACAACATATGTATGATCGTGTATTTGATGGTAATGCCACCCAAGAGGATGTATTTGAAGATACAAAGTATTTGGTACAATCTGCAATTGATGGGTATAATGTGTGCATATTTGCGTATGGGCAAACCGGTTCTGGAAAGACATATACCATATACGGTTCAGAAACAAATCCTGGACTTACTCCACGAGCTACTGCAGAGCTGTTTAAAATATTGAGGCGAGAGAACAACAAATTCTCATTTTCGTTAAAGGCATACATGTTGGAGTTGTATCAAGATACACTTGTAGACCTTCTCTTACCGAAAAATGCCAAGCGTTTGAAATTGGAGATCAAGAAAGATTCAAAGGGTATGGTCACGGTTGAGAATGTAACAGTTCTCTCAATTTCATCACACGAGGAACTGAAAAGTGTCATTCAAAGAGGTTCTGAACGAAGGCATATTTCCGGAACTCAGATGAACGAAGAAAGATCTAGATCACACCTCATAGTTTCTGTTGTCATTGAAAGTACCAACCTTCAAACTCAATCTGTTGGAAGAGGAAAGCTAAGTTTTGTAGATCTTGCTGGTTCGGAAAGAATAAAGAAGTCAGGCTCTTCAGGTAGTCAACTTAAAGAAGCTCAAAGCATCAACAAGTCACTTTCAGCACTTGGGGATGTTATTAGTTCTTTATCTTCTGGTGGTCAACACATACCGTACAGGAACCATAAGTTAACGATGCTAATGAGTGATTCACTTGGTGGTAACGCCAAGACGCTTATGTTCGTTAATGTTTCTCCCGCTGAATCAAATGTGGAGGAGTCGTACAATTCTCTAATGTACGTATGCATCAAGAGTACGATCAATCTGAATGATCCAAGCAAAAACGTTTCTTCAAAAGAGATCATGCGGCTGAAGAAGTTGGTTGCATATTGGAAAGAACAAGCAGGCAAGAGAGGAGACGACGATGATTTGGAAGAAATTCAGGACGAGCGACCGGTGAAAGATAGAGGTGATGGCCGCTATTCCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000226 GO:0000902 GO:0000904 GO:0001578 GO:0003002 GO:0003674 GO:0003774 GO:0003777 GO:0003779 GO:0003824 GO:0005488 GO:0005509 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005881 GO:0005938 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007154 GO:0007267 GO:0007275 GO:0007389 GO:0008017 GO:0008092 GO:0008150 GO:0008569 GO:0009524 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0015630 GO:0015631 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0030154 GO:0030554 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032991 GO:0036094 GO:0042623 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043531 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0044877 GO:0045165 GO:0045168 GO:0046872 GO:0046983 GO:0048468 GO:0048629 GO:0048856 GO:0048869 GO:0051015 GO:0055028 GO:0071840 GO:0071944 GO:0072686 GO:0090558 GO:0090626 GO:0097159 GO:0097367 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:1901265 GO:1901363 GO:1990939
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FERM_M FERM_N Kinesin MyTH4

Protein Analysis

411

Amino Acids

46.36

Weight (kDa)

8.44

Isoelectric Point (pI)

44.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 14 - 172 2.4e-47 Microtubule binding
Kinesin PF00225 39 - 348 5.2e-106 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0024617)

Species Orthologous Gene IDs
pyrus_communis pycom02g08440 pycom15g20110
rosa_samantha Rh2AG106200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 507
AccIII TCCGGA 1 cut(s) 665
AciI CCGC 3 cut(s) 999, 1108, 1219
AclI AACGTT 1 cut(s) 1086
AclWI GGATC 1 cut(s) 1067
AcoI YGGCCR 1 cut(s) 1216
AcsI RAATTY 2 cut(s) 452, 1179
AcuI CTGAAG 2 cut(s) 801, 1133
AdeI CACNNNGTG 1 cut(s) 959
AfaI GTAC 6 cut(s) 297, 730, 917, 1025, 1040, 1057
AfeI AGCGCT 1 cut(s) 33
AflIII ACRYGT 1 cut(s) 477
AgeI ACCGGT 2 cut(s) 347, 1195
AgsI TTSAA 9 cut(s) 194, 220, 278, 541, 564, 638, 725, 740, 1095
AjnI CCWGG 1 cut(s) 391
AluBI AGCT 6 cut(s) 11, 20, 410, 421, 766, 839
AluI AGCT 6 cut(s) 11, 20, 410, 421, 766, 839
Alw21I GWGCWC 1 cut(s) 13
Alw26I GTCTC 1 cut(s) 1152
AlwI GGATC 1 cut(s) 1067
Aor13HI TCCGGA 1 cut(s) 665
Aor51HI AGCGCT 1 cut(s) 33
AoxI GGCC 1 cut(s) 1216
ApoI RAATTY 2 cut(s) 452, 1179
AsiGI ACCGGT 2 cut(s) 347, 1195
Asp700I GAANNNNTTC 1 cut(s) 1179
AspLEI GCGC 1 cut(s) 34
AsuHPI GGTGA 2 cut(s) 1210, 1223
BaeI ACNNNNGTAYC 2 cut(s) 489, 522
BanII GRGCYC 1 cut(s) 13
BauI CACGAG 2 cut(s) 405, 614
BbsI GAAGAC 1 cut(s) 100
Bbv12I GWGCWC 1 cut(s) 13
BccI CCATC 3 cut(s) 242, 305, 1208
BciT130I CCWGG 1 cut(s) 393
BcoDI GTCTC 1 cut(s) 1152
BfaI CTAG 2 cut(s) 17, 693
BfmI CTRYAG 2 cut(s) 78, 414
BfoI RGCGCY 1 cut(s) 35
BglII AGATCT 2 cut(s) 689, 778
BisI GCNGC 2 cut(s) 1109, 1219
BlsI GCNGC 2 cut(s) 1110, 1220
Bme1390I CCNGG 1 cut(s) 393
BmiI GGNNCC 1 cut(s) 923
BmrFI CCNGG 1 cut(s) 393
BmsI GCATC 4 cut(s) 151, 855, 927, 1056
BpiI GAAGAC 1 cut(s) 100
BsaAI YACGTR 1 cut(s) 1042
BsaBI GATNNNNATC 1 cut(s) 694
BsaJI CCNNGG 1 cut(s) 200
BsaWI WCCGGW 3 cut(s) 347, 665, 1195
BsaXI ACNNNNNCTCC 2 cut(s) 1007, 1037
Bse118I RCCGGY 2 cut(s) 347, 1195
Bse8I GATNNNNATC 1 cut(s) 694
BseAI TCCGGA 1 cut(s) 665
BseBI CCWGG 1 cut(s) 393
BseDI CCNNGG 1 cut(s) 200
BseGI GGATG 4 cut(s) 196, 214, 274, 880
BseJI GATNNNNATC 1 cut(s) 694
BseMII CTCAG 2 cut(s) 12, 686
BseRI GAGGAG 2 cut(s) 1031, 1170
Bsh1285I CGRYCG 1 cut(s) 1196
BshFI GGCC 1 cut(s) 1218
BshTI ACCGGT 2 cut(s) 347, 1195
BsiEI CGRYCG 1 cut(s) 1196
BsiHKAI GWGCWC 1 cut(s) 13
BsiSI CCGG 3 cut(s) 348, 666, 1196
BsmAI GTCTC 1 cut(s) 1152
BsmBI CGTCTC 1 cut(s) 1152
BsnI GGCC 1 cut(s) 1218
Bsp1286I GDGCHC 1 cut(s) 13
Bsp13I TCCGGA 1 cut(s) 665
Bsp143I GATC 8 cut(s) 235, 549, 689, 695, 778, 1059, 1072, 1101
Bsp19I CCATGG 1 cut(s) 200
BspACI CCGC 3 cut(s) 999, 1108, 1219
BspANI GGCC 1 cut(s) 1218
BspCNI CTCAG 2 cut(s) 13, 685
BspEI TCCGGA 1 cut(s) 665
BspLI GGNNCC 1 cut(s) 923
BspMAI CTGCAG 1 cut(s) 418
BspPI GGATC 1 cut(s) 1067
BspQI GCTCTTC 1 cut(s) 820
BsrFI RCCGGY 2 cut(s) 347, 1195
BssAI RCCGGY 2 cut(s) 347, 1195
BssECI CCNNGG 1 cut(s) 200
BssMI GATC 8 cut(s) 235, 549, 689, 695, 778, 1059, 1072, 1101
BssSI CACGAG 2 cut(s) 405, 614
BssT1I CCWWGG 1 cut(s) 200
Bst2BI CACGAG 2 cut(s) 405, 614
Bst2UI CCWGG 1 cut(s) 393
Bst4CI ACNGT 4 cut(s) 377, 580, 595, 915
Bst6I CTCTTC 2 cut(s) 751, 820
BstBAI YACGTR 1 cut(s) 1042
BstC8I GCNNGC 1 cut(s) 1147
BstDEI CTNAG 3 cut(s) 21, 672, 767
BstDSI CCRYGG 1 cut(s) 200
BstF5I GGATG 4 cut(s) 196, 214, 274, 880
BstH2I RGCGCY 1 cut(s) 35
BstHHI GCGC 1 cut(s) 34
BstKTI GATC 8 cut(s) 238, 552, 692, 698, 781, 1062, 1075, 1104
BstMAI GTCTC 1 cut(s) 1152
BstMBI GATC 8 cut(s) 235, 549, 689, 695, 778, 1059, 1072, 1101
BstMCI CGRYCG 1 cut(s) 1196
BstMWI GCNNNNNNNGC 1 cut(s) 17
BstNI CCWGG 1 cut(s) 393
BstNSI RCATGY 1 cut(s) 481
BstSCI CCNGG 1 cut(s) 391
BstSFI CTRYAG 2 cut(s) 78, 414
BstSNI TACGTA 1 cut(s) 1042
BstV2I GAAGAC 1 cut(s) 100
BstX2I RGATCY 2 cut(s) 689, 778
BstYI RGATCY 2 cut(s) 689, 778
BsuRI GGCC 1 cut(s) 1218
BtgI CCRYGG 1 cut(s) 200
BtsCI GGATG 4 cut(s) 196, 214, 274, 880
Cac8I GCNNGC 1 cut(s) 1147
CfoI GCGC 1 cut(s) 34
Cfr10I RCCGGY 2 cut(s) 347, 1195
CseI GACGC 1 cut(s) 982
Csp6I GTAC 6 cut(s) 296, 729, 916, 1024, 1039, 1056
CspAI ACCGGT 2 cut(s) 347, 1195
CviAII CATG 4 cut(s) 201, 478, 1105, 1228
CviJI RGCY 9 cut(s) 11, 20, 410, 421, 766, 813, 839, 1111, 1218
CviKI_1 RGCY 9 cut(s) 11, 20, 410, 421, 766, 813, 839, 1111, 1218
CviQI GTAC 6 cut(s) 296, 729, 916, 1024, 1039, 1056
DdeI CTNAG 3 cut(s) 21, 672, 767
DpnI GATC 8 cut(s) 237, 551, 691, 697, 780, 1061, 1074, 1103
DpnII GATC 8 cut(s) 235, 549, 689, 695, 778, 1059, 1072, 1101
DraI TTTAAA 1 cut(s) 427
DraIII CACNNNGTG 1 cut(s) 959
EaeI YGGCCR 1 cut(s) 1216
Eam1104I CTCTTC 2 cut(s) 751, 820
EarI CTCTTC 2 cut(s) 751, 820
Ecl136II GAGCTC 1 cut(s) 11
Eco105I TACGTA 1 cut(s) 1042
Eco130I CCWWGG 1 cut(s) 200
Eco24I GRGCYC 1 cut(s) 13
Eco47III AGCGCT 1 cut(s) 33
Eco53kI GAGCTC 1 cut(s) 11
Eco57I CTGAAG 2 cut(s) 801, 1133
EcoICRI GAGCTC 1 cut(s) 11
EcoRII CCWGG 1 cut(s) 391
EcoT14I CCWWGG 1 cut(s) 200
EcoT22I ATGCAT 1 cut(s) 1049
EcoT38I GRGCYC 1 cut(s) 13
ErhI CCWWGG 1 cut(s) 200
Esp3I CGTCTC 1 cut(s) 1152
FaeI CATG 4 cut(s) 204, 481, 1108, 1231
FalI AAGNNNNNCTT 4 cut(s) 36, 68, 486, 518
FatI CATG 4 cut(s) 200, 477, 1104, 1227
FauI CCCGC 1 cut(s) 1006
FauNDI CATATG 1 cut(s) 228
FblI GTMKAC 1 cut(s) 507
Fnu4HI GCNGC 2 cut(s) 1109, 1219
FokI GGATG 4 cut(s) 183, 221, 281, 887
FriOI GRGCYC 1 cut(s) 13
Fsp4HI GCNGC 2 cut(s) 1109, 1219
FspBI CTAG 2 cut(s) 17, 693
GlaI GCGC 1 cut(s) 33
GluI GCNGC 2 cut(s) 1109, 1219
HaeII RGCGCY 1 cut(s) 35
HaeIII GGCC 1 cut(s) 1218
HapII CCGG 3 cut(s) 348, 666, 1196
HgaI GACGC 1 cut(s) 982
HhaI GCGC 1 cut(s) 34
Hin1II CATG 4 cut(s) 204, 481, 1108, 1231
Hin6I GCGC 1 cut(s) 32
HinP1I GCGC 1 cut(s) 32
HincII GTYRAC 3 cut(s) 827, 905, 933
HindII GTYRAC 3 cut(s) 827, 905, 933
HinfI GANTC 5 cut(s) 105, 560, 950, 1004, 1019
HpaI GTTAAC 1 cut(s) 933
HpaII CCGG 3 cut(s) 348, 666, 1196
HphI GGTGA 2 cut(s) 1210, 1223
Hpy166II GTNNAC 5 cut(s) 186, 508, 827, 905, 933
Hpy188I TCNGA 5 cut(s) 382, 649, 675, 793, 1068
Hpy188III TCNNGA 7 cut(s) 354, 494, 553, 666, 693, 1051, 1184
Hpy8I GTNNAC 5 cut(s) 186, 508, 827, 905, 933
Hpy99I CGWCG 1 cut(s) 1166
HpyAV CCTTC 4 cut(s) 199, 521, 648, 746
HpyCH4III ACNGT 4 cut(s) 377, 580, 595, 915
HpyCH4IV ACGT 2 cut(s) 1041, 1086
HpyCH4V TGCA 8 cut(s) 4, 134, 164, 305, 327, 416, 1047, 1127
HpyF10VI GCNNNNNNNGC 1 cut(s) 17
HpyF3I CTNAG 3 cut(s) 21, 672, 767
HpySE526I ACGT 2 cut(s) 1041, 1086
Hsp92II CATG 4 cut(s) 204, 481, 1108, 1231
HspAI GCGC 1 cut(s) 32
Kpn2I TCCGGA 1 cut(s) 665
KspAI GTTAAC 1 cut(s) 933
Kzo9I GATC 8 cut(s) 235, 549, 689, 695, 778, 1059, 1072, 1101
LguI GCTCTTC 1 cut(s) 820
LmnI GCTCC 1 cut(s) 8
LweI GCATC 4 cut(s) 151, 855, 927, 1056
MaeI CTAG 2 cut(s) 17, 693
MaeII ACGT 2 cut(s) 1041, 1086
MaeIII GTNAC 4 cut(s) 574, 589, 855, 962
MalI GATC 8 cut(s) 237, 551, 691, 697, 780, 1061, 1074, 1103
MboI GATC 8 cut(s) 235, 549, 689, 695, 778, 1059, 1072, 1101
MfeI CAATTG 2 cut(s) 189, 306
MflI RGATCY 2 cut(s) 689, 778
MhlI GDGCHC 1 cut(s) 13
MluCI AATT 9 cut(s) 141, 189, 215, 306, 452, 542, 603, 1027, 1179
MlyI GAGTC 2 cut(s) 114, 1028
MmeI TCCRAC 2 cut(s) 462, 733
Mph1103I ATGCAT 1 cut(s) 1049
MroI TCCGGA 1 cut(s) 665
MroXI GAANNNNTTC 1 cut(s) 1179
MseI TTAA 8 cut(s) 72, 119, 168, 426, 467, 831, 932, 987
MslI CAYNNNNRTG 1 cut(s) 231
MspA1I CMGCKG 1 cut(s) 1001
MspI CCGG 3 cut(s) 348, 666, 1196
MspR9I CCNGG 1 cut(s) 393
MunI CAATTG 2 cut(s) 189, 306
MvaI CCWGG 1 cut(s) 393
MwoI GCNNNNNNNGC 1 cut(s) 17
NcoI CCATGG 1 cut(s) 200
NdeI CATATG 1 cut(s) 228
NdeII GATC 8 cut(s) 235, 549, 689, 695, 778, 1059, 1072, 1101
NlaIII CATG 4 cut(s) 204, 481, 1108, 1231
NlaIV GGNNCC 1 cut(s) 923
NmuCI GTSAC 2 cut(s) 574, 855
NsiI ATGCAT 1 cut(s) 1049
NspI RCATGY 1 cut(s) 481
PciI ACATGT 1 cut(s) 477
PciSI GCTCTTC 1 cut(s) 820
PdmI GAANNNNTTC 1 cut(s) 1179
PfeI GAWTC 3 cut(s) 560, 950, 1004
PfoI TCCNGGA 1 cut(s) 391
PinAI ACCGGT 2 cut(s) 347, 1195
PkrI GCNGC 2 cut(s) 1110, 1220
PleI GAGTC 2 cut(s) 113, 1027
PpsI GAGTC 2 cut(s) 113, 1027
Ppu21I YACGTR 1 cut(s) 1042
PscI ACATGT 1 cut(s) 477
Psp124BI GAGCTC 1 cut(s) 13
Psp1406I AACGTT 1 cut(s) 1086
Psp6I CCWGG 1 cut(s) 391
PspGI CCWGG 1 cut(s) 391
PspN4I GGNNCC 1 cut(s) 923
PstI CTGCAG 1 cut(s) 418
PsuI RGATCY 2 cut(s) 689, 778
RsaI GTAC 6 cut(s) 297, 730, 917, 1025, 1040, 1057
RsaNI GTAC 6 cut(s) 296, 729, 916, 1024, 1039, 1056
RseI CAYNNNNRTG 1 cut(s) 231
SacI GAGCTC 1 cut(s) 13
SapI GCTCTTC 1 cut(s) 820
SaqAI TTAA 8 cut(s) 72, 119, 168, 426, 467, 831, 932, 987
SatI GCNGC 2 cut(s) 1109, 1219
Sau3AI GATC 8 cut(s) 235, 549, 689, 695, 778, 1059, 1072, 1101
SchI GAGTC 2 cut(s) 114, 1028
ScrFI CCNGG 1 cut(s) 393
SduI GDGCHC 1 cut(s) 13
SfaNI GCATC 4 cut(s) 151, 855, 927, 1056
SfcI CTRYAG 2 cut(s) 78, 414
SmiMI CAYNNNNRTG 1 cut(s) 231
SnaBI TACGTA 1 cut(s) 1042
Sse9I AATT 9 cut(s) 141, 189, 215, 306, 452, 542, 603, 1027, 1179
SsiI CCGC 3 cut(s) 999, 1108, 1219
SspI AATATT 1 cut(s) 432
SspMI CTAG 2 cut(s) 17, 693
SstI GAGCTC 1 cut(s) 13
StyD4I CCNGG 1 cut(s) 391
StyI CCWWGG 1 cut(s) 200
TaaI ACNGT 4 cut(s) 377, 580, 595, 915
TaiI ACGT 2 cut(s) 1044, 1089
TasI AATT 9 cut(s) 141, 189, 215, 306, 452, 542, 603, 1027, 1179
TauI GCSGC 2 cut(s) 1111, 1221
TfiI GAWTC 3 cut(s) 560, 950, 1004
Tru1I TTAA 8 cut(s) 72, 119, 168, 426, 467, 831, 932, 987
Tru9I TTAA 8 cut(s) 72, 119, 168, 426, 467, 831, 932, 987
TseFI GTSAC 2 cut(s) 574, 855
Tsp45I GTSAC 2 cut(s) 574, 855
TspDTI ATGAA 3 cut(s) 104, 597, 692
XapI RAATTY 2 cut(s) 452, 1179
XbaI TCTAGA 1 cut(s) 692
XceI RCATGY 1 cut(s) 481
XmiI GTMKAC 1 cut(s) 507
XmnI GAANNNNTTC 1 cut(s) 1179
XspI CTAG 2 cut(s) 17, 693
Zsp2I ATGCAT 1 cut(s) 1049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.