Rh2AG106200
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
9333051 .. 9334808
1758 bp
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UTR
Exon/CDS
Intron
Rh2AG106200.1

Sequence Viewer

Length: 993 bp
ATGAAATATGTCACTTGTAATCTATTAACAATTTATCCTGGCCTAATGCAGTATTTGGTACAATCTGCCGTAGATGGATACAACGTGTGCATATTTGCTTATGGGCAAACAGGTTCTGGGAAGACATATACCATTTATGGTTCAGAAACTAAACCTGGACTTACTCCTAGAGCTACTGCAGAACTTTTTAAAATCTTGAAGCGAGATAGCAACAAGTTCTCATTTTCTTTGAAGGCATATATGGTGGAATTGTATCAAGATACACTGTTAGACCTTCTATTGCCCAAAAATGCAAAGCGTCCAAAATTAGATATCAAAAAGGATTCAAAGGGCATGGTATCAGTTGAAAATATAACGGTTCTATCAATTTCGACACATGAGGAACTGAAAAACGTCATTCAAAGAGGATCTGAACGACGGCATACGTCAGGCACTCAAATGAATCAAGAAAGTTCAAGATCTCACCTCATAGTGTCGGTTATTATTGAAAGTACCAATCTTCAGACGCAGTCTGTTGCAAGAGGAAAGCTAAGTTTTGTGGATCTTGCTGGTTCGGAAAGAATAAAGAAGTCAGGTTCTGCGGGCAGTCAACTCAAAGAAGCTCAAAGCATCAACAAGTCACTTTCAGCACTCGGAGATGTGATTGGTGCTTTATCTTCTGGTGGACAGCACATACCCTACCGGAATCACAAACTAACAATGTTGATGAGTGATTCCCTTGGTGGTAATGCCAAGACGCTTATGTTTGTCAATTGTTCTCCTGCCGAATCAAACATGGATGAGACATATAATTCTCTAATGTATGCATCCAGAGTTCGAGCAATCGTGAATGATCCAAGCAAGAATGTATCTTCAAAAGAGATCATGCGACTGAAAAAGTTGGTTTCTTATTGGAAAGAACAAGCTGGAAAGAGAGGAGAAGATGAGGATTTAGAAGAAATCCAGGACGAGCGGCCACCAAGAGAGAAAGGAGATGGCCGGCACTCGATGTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

330

Amino Acids

36.64

Weight (kDa)

9.24

Isoelectric Point (pI)

40.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 11 - 275 4.1e-99 Kinesin motor domain
Microtub_bd PF16796 16 - 93 8.2e-23 Microtubule binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0024617)

Species Orthologous Gene IDs
pyrus_communis pycom02g08440 pycom15g20110
rosa_samantha Rh2AG106200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 952
AciI CCGC 2 cut(s) 581, 952
AclWI GGATC 3 cut(s) 415, 549, 827
AcoI YGGCCR 2 cut(s) 953, 976
AcuI CTGAAG 1 cut(s) 485
AfaI GTAC 2 cut(s) 60, 493
AflIII ACRYGT 1 cut(s) 84
AgsI TTSAA 8 cut(s) 199, 232, 327, 347, 401, 456, 488, 855
AjnI CCWGG 3 cut(s) 37, 154, 942
AluBI AGCT 4 cut(s) 173, 529, 602, 905
AluI AGCT 4 cut(s) 173, 529, 602, 905
Alw26I GTCTC 1 cut(s) 776
AlwI GGATC 3 cut(s) 415, 549, 827
AlwNI CAGNNNCTG 2 cut(s) 116, 578
AoxI GGCC 3 cut(s) 40, 953, 976
AsuHPI GGTGA 1 cut(s) 455
BbsI GAAGAC 1 cut(s) 128
BccI CCATC 2 cut(s) 68, 968
BceAI ACGGC 2 cut(s) 53, 434
BciT130I CCWGG 3 cut(s) 39, 156, 944
BciVI GTATCC 1 cut(s) 71
BcoDI GTCTC 1 cut(s) 776
BfaI CTAG 1 cut(s) 168
BfmI CTRYAG 1 cut(s) 177
BfuI GTATCC 1 cut(s) 71
BglII AGATCT 1 cut(s) 458
BisI GCNGC 1 cut(s) 953
BlsI GCNGC 1 cut(s) 954
Bme1390I CCNGG 3 cut(s) 39, 156, 944
BmrFI CCNGG 3 cut(s) 39, 156, 944
BmsI GCATC 2 cut(s) 618, 815
BpiI GAAGAC 1 cut(s) 128
BsaJI CCNNGG 1 cut(s) 718
BsaWI WCCGGW 1 cut(s) 681
Bse118I RCCGGY 1 cut(s) 978
BseBI CCWGG 3 cut(s) 39, 156, 944
BseDI CCNNGG 1 cut(s) 718
BseGI GGATG 2 cut(s) 784, 806
BseRI GAGGAG 1 cut(s) 930
BshFI GGCC 3 cut(s) 42, 955, 978
BsiSI CCGG 2 cut(s) 682, 979
BsmAI GTCTC 1 cut(s) 776
BsnI GGCC 3 cut(s) 42, 955, 978
Bsp143I GATC 5 cut(s) 407, 458, 541, 832, 861
BspACI CCGC 2 cut(s) 581, 952
BspANI GGCC 3 cut(s) 42, 955, 978
BspMAI CTGCAG 1 cut(s) 181
BspPI GGATC 3 cut(s) 415, 549, 827
BsrBI CCGCTC 1 cut(s) 952
BsrFI RCCGGY 1 cut(s) 978
BssAI RCCGGY 1 cut(s) 978
BssECI CCNNGG 1 cut(s) 718
BssMI GATC 5 cut(s) 407, 458, 541, 832, 861
BssT1I CCWWGG 1 cut(s) 718
Bst2UI CCWGG 3 cut(s) 39, 156, 944
Bst4CI ACNGT 2 cut(s) 267, 358
BstC8I GCNNGC 2 cut(s) 583, 980
BstDEI CTNAG 1 cut(s) 530
BstF5I GGATG 2 cut(s) 784, 806
BstKTI GATC 5 cut(s) 410, 461, 544, 835, 864
BstMAI GTCTC 1 cut(s) 776
BstMBI GATC 5 cut(s) 407, 458, 541, 832, 861
BstNI CCWGG 3 cut(s) 39, 156, 944
BstSCI CCNGG 3 cut(s) 37, 154, 942
BstSFI CTRYAG 1 cut(s) 177
BstV2I GAAGAC 1 cut(s) 128
BstX2I RGATCY 3 cut(s) 407, 458, 541
BstYI RGATCY 3 cut(s) 407, 458, 541
BsuI GTATCC 1 cut(s) 71
BsuRI GGCC 3 cut(s) 42, 955, 978
BtsCI GGATG 2 cut(s) 784, 806
BtsIMutI CAGTG 1 cut(s) 263
Cac8I GCNNGC 2 cut(s) 583, 980
CaiI CAGNNNCTG 2 cut(s) 116, 578
Cfr10I RCCGGY 1 cut(s) 978
CseI GACGC 3 cut(s) 287, 514, 745
Csp6I GTAC 2 cut(s) 59, 492
CviAII CATG 4 cut(s) 334, 377, 775, 865
CviJI RGCY 7 cut(s) 42, 173, 529, 602, 905, 955, 978
CviKI_1 RGCY 7 cut(s) 42, 173, 529, 602, 905, 955, 978
CviQI GTAC 2 cut(s) 59, 492
DdeI CTNAG 1 cut(s) 530
DpnI GATC 5 cut(s) 409, 460, 543, 834, 863
DpnII GATC 5 cut(s) 407, 458, 541, 832, 861
DraI TTTAAA 1 cut(s) 190
EaeI YGGCCR 2 cut(s) 953, 976
Eco130I CCWWGG 1 cut(s) 718
Eco32I GATATC 1 cut(s) 313
Eco57I CTGAAG 1 cut(s) 485
EcoRII CCWGG 3 cut(s) 37, 154, 942
EcoRV GATATC 1 cut(s) 313
EcoT14I CCWWGG 1 cut(s) 718
EcoT22I ATGCAT 1 cut(s) 808
ErhI CCWWGG 1 cut(s) 718
FaeI CATG 4 cut(s) 337, 380, 778, 868
FatI CATG 4 cut(s) 333, 376, 774, 864
FauI CCCGC 1 cut(s) 574
Fnu4HI GCNGC 1 cut(s) 953
FokI GGATG 2 cut(s) 791, 793
Fsp4HI GCNGC 1 cut(s) 953
FspBI CTAG 1 cut(s) 168
GluI GCNGC 1 cut(s) 953
HaeIII GGCC 3 cut(s) 42, 955, 978
HapII CCGG 2 cut(s) 682, 979
HgaI GACGC 3 cut(s) 287, 514, 745
Hin1II CATG 4 cut(s) 337, 380, 778, 868
HincII GTYRAC 1 cut(s) 590
HindII GTYRAC 1 cut(s) 590
HinfI GANTC 5 cut(s) 323, 442, 685, 713, 767
HpaII CCGG 2 cut(s) 682, 979
HphI GGTGA 1 cut(s) 455
Hpy166II GTNNAC 2 cut(s) 590, 665
Hpy188I TCNGA 5 cut(s) 145, 412, 504, 556, 635
Hpy188III TCNNGA 6 cut(s) 196, 257, 446, 456, 810, 826
Hpy8I GTNNAC 2 cut(s) 590, 665
Hpy99I CGWCG 1 cut(s) 420
HpyAV CCTTC 2 cut(s) 226, 284
HpyCH4III ACNGT 2 cut(s) 267, 358
HpyCH4IV ACGT 3 cut(s) 84, 393, 425
HpyCH4V TGCA 6 cut(s) 49, 90, 179, 293, 518, 806
HpyF3I CTNAG 1 cut(s) 530
HpySE526I ACGT 3 cut(s) 84, 393, 425
Hsp92II CATG 4 cut(s) 337, 380, 778, 868
KroI GCCGGC 1 cut(s) 978
KroNI GCCGGC 1 cut(s) 980
Kzo9I GATC 5 cut(s) 407, 458, 541, 832, 861
LweI GCATC 2 cut(s) 618, 815
MaeI CTAG 1 cut(s) 168
MaeII ACGT 3 cut(s) 84, 393, 425
MaeIII GTNAC 2 cut(s) 10, 618
MalI GATC 5 cut(s) 409, 460, 543, 834, 863
MbiI CCGCTC 1 cut(s) 952
MboI GATC 5 cut(s) 407, 458, 541, 832, 861
MboII GAAGA 6 cut(s) 133, 491, 648, 843, 932, 947
MfeI CAATTG 1 cut(s) 751
MflI RGATCY 3 cut(s) 407, 458, 541
MluCI AATT 6 cut(s) 30, 248, 305, 366, 751, 790
MnlI CCTC 6 cut(s) 373, 398, 476, 515, 908, 919
Mph1103I ATGCAT 1 cut(s) 808
MroNI GCCGGC 1 cut(s) 978
MseI TTAA 2 cut(s) 26, 189
MslI CAYNNNNRTG 1 cut(s) 437
MspI CCGG 2 cut(s) 682, 979
MspR9I CCNGG 3 cut(s) 39, 156, 944
MunI CAATTG 1 cut(s) 751
MvaI CCWGG 3 cut(s) 39, 156, 944
NaeI GCCGGC 1 cut(s) 980
NdeII GATC 5 cut(s) 407, 458, 541, 832, 861
NgoMIV GCCGGC 1 cut(s) 978
NlaIII CATG 4 cut(s) 337, 380, 778, 868
NmuCI GTSAC 2 cut(s) 10, 618
NsiI ATGCAT 1 cut(s) 808
PdiI GCCGGC 1 cut(s) 980
PfeI GAWTC 5 cut(s) 323, 442, 685, 713, 767
PflFI GACNNNGTC 1 cut(s) 508
PfoI TCCNGGA 1 cut(s) 942
PkrI GCNGC 1 cut(s) 954
Psp6I CCWGG 3 cut(s) 37, 154, 942
PspGI CCWGG 3 cut(s) 37, 154, 942
PstI CTGCAG 1 cut(s) 181
PstNI CAGNNNCTG 2 cut(s) 116, 578
PsuI RGATCY 3 cut(s) 407, 458, 541
PsyI GACNNNGTC 1 cut(s) 508
RsaI GTAC 2 cut(s) 60, 493
RsaNI GTAC 2 cut(s) 59, 492
RseI CAYNNNNRTG 1 cut(s) 437
SaqAI TTAA 2 cut(s) 26, 189
SatI GCNGC 1 cut(s) 953
Sau3AI GATC 5 cut(s) 407, 458, 541, 832, 861
ScrFI CCNGG 3 cut(s) 39, 156, 944
SfaNI GCATC 2 cut(s) 618, 815
SfcI CTRYAG 1 cut(s) 177
SmiMI CAYNNNNRTG 1 cut(s) 437
Sse9I AATT 6 cut(s) 30, 248, 305, 366, 751, 790
SsiI CCGC 2 cut(s) 581, 952
SspMI CTAG 1 cut(s) 168
StyD4I CCNGG 3 cut(s) 37, 154, 942
StyI CCWWGG 1 cut(s) 718
TaaI ACNGT 2 cut(s) 267, 358
TaiI ACGT 3 cut(s) 87, 396, 428
TaqI TCGA 3 cut(s) 371, 817, 986
TasI AATT 6 cut(s) 30, 248, 305, 366, 751, 790
TauI GCSGC 1 cut(s) 955
TfiI GAWTC 5 cut(s) 323, 442, 685, 713, 767
Tru1I TTAA 2 cut(s) 26, 189
Tru9I TTAA 2 cut(s) 26, 189
TscAI CASTG 1 cut(s) 270
TseFI GTSAC 2 cut(s) 10, 618
Tsp45I GTSAC 2 cut(s) 10, 618
TspDTI ATGAA 2 cut(s) 17, 455
TspRI CASTG 1 cut(s) 270
Tth111I GACNNNGTC 1 cut(s) 508
XspI CTAG 1 cut(s) 168
Zsp2I ATGCAT 1 cut(s) 808
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.