pycom15g31050

Delta-aminolevulinic acid dehydratase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
29244573 .. 29247222
2650 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1272 bp
ATGGCTTCAACAATTGTTAACGTGGGACCCATCCAGGGTCTGGATTACGTTGGTCTCAGACCCGCCAAACCTCTGAAACTCAATTCGGGTCGGATCCAAATCAAGACCACCCGCCCACAGCGCCTTTTCACCATAAGAGCCAGCGACGGCGATGGATCAATCGGGAAGACCCGGCTCAGCGACGCCGAGTGCGAGGCTGCCGTTGTCGCAGGAAACCCGCCGCAAGCGCCGCCGGCGCCGCCTAAGGCCGCCGCCCCAGCTGGAACTCCAGTAGTGTCTTCGCTTCCGATCAATCGGAGACCTCGCCGGAACCGAAGGTCGCCGTCGCTGAGAGCTGCGTTTCAGGAAACAAGTTTGTCTCCTGCCAATTTTGTGTATCCACTTTTTATCCATGAAGGTCAGGACGACGCCCCTATTGGGGCAATGCCGGGATGTTATAGGCTTGGGTGGAGACATGGACTTGTGGAAGAGGTTGCAAAGGCTCGAGATGTTGGTGTCAATAGTATTGTGCTTTTCCCCAAAGTTCCAGATGCTTTGAAGAATCCAACAGGTGATGAAGCGTACAACGATAATGGATTAGTGCCTCGAACAATACGGTTGCTCAAAGACAAATACCCTGATCTTGTTATATACACAGATGTTGCTTTAGATCCATATTCCTCTGATGGGCATGACGGTATTGTCAGAGAAGATGGAGTTATTCTGAATGATGAGACAGTACATCAATTATGTAAGCAAGCTGTTTCCCAGGCCCGAGCTGGAGCAGATGTTGTGAGTCCCAGTGACATGATGGATGGTCGTGTGGGAGCTATTCGAACTGCTCTTGATGCTGAAGGTTTTCAGCATGTTTCTATCATGTCTTATACAGCAAAGTATGCAAGTTCATTTTATGGTCCATTTCGGGAAGCATTGGACTCGAATCCACGTTTTGGTGACAAGAAAACTTATCAGATGAACCCCGCAAATTATAGAGAGGCTATGGTTGAGGCAAATGAAGATGAGTCTGAAGGAGCCGATATCCTCTTGGTGAAGCCTGCTCTACCATATTTAGATATCATAAGATTACTCCGCAATAACTCTCCTCTGCCTATAGCTGCATATCAGGTTTCTGGTGAGTATTCAATGATCAAGGCTGGTGGAGTTCTGAAAATGATTGACGAAGAAAAGGTTATGATGGAATCACTCATGTGTCTCAGAAGGGCCGGTGCTGACGTAATCCTCACATATTTTGCCCTGCAAGCTGCCAGAACTTTATGCGGTGAGAAGAGGTGA

Protein Analysis

424

Amino Acids

46.01

Weight (kDa)

6.97

Isoelectric Point (pI)

43.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALAD PF00490 99 - 416 2.9e-133 Delta-aminolevulinic acid dehydratase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010985)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 680
AccB1I GGYRCC 1 cut(s) 235
AccB7I CCANNNNNTGG 2 cut(s) 40, 929
AclWI GGATC 4 cut(s) 88, 101, 163, 644
AcuI CTGAAG 2 cut(s) 852, 1026
AcyI GRCGYC 3 cut(s) 183, 236, 408
AfaI GTAC 2 cut(s) 563, 720
AfiI CCNNNNNNNGG 6 cut(s) 35, 40, 417, 418, 666, 929
AgsI TTSAA 3 cut(s) 9, 538, 1122
AjnI CCWGG 2 cut(s) 33, 747
AleI CACNNNNGTG 1 cut(s) 1186
AluBI AGCT 7 cut(s) 260, 335, 740, 758, 809, 1094, 1241
AluI AGCT 7 cut(s) 260, 335, 740, 758, 809, 1094, 1241
Alw26I GTCTC 6 cut(s) 59, 292, 363, 445, 707, 1196
AlwI GGATC 4 cut(s) 88, 101, 163, 644
AlwNI CAGNNNCTG 1 cut(s) 40
Ama87I CYCGRG 2 cut(s) 483, 753
AoxI GGCC 3 cut(s) 246, 750, 1200
ApeKI GCWGC 4 cut(s) 197, 335, 1094, 1241
Asp700I GAANNNNTTC 1 cut(s) 837
AspLEI GCGC 3 cut(s) 123, 229, 238
AspS9I GGNCC 4 cut(s) 26, 751, 893, 1200
AsuC2I CCSGG 2 cut(s) 172, 429
AsuHPI GGTGA 6 cut(s) 121, 563, 944, 1039, 1124, 1271
AsuII TTCGAA 1 cut(s) 814
AvaI CYCGRG 2 cut(s) 483, 753
AvaII GGWCC 2 cut(s) 26, 893
AxyI CCTNAGG 1 cut(s) 243
BamHI GGATCC 1 cut(s) 93
BanI GGYRCC 1 cut(s) 235
BbsI GAAGAC 2 cut(s) 173, 270
BbvI GCAGC 4 cut(s) 184, 322, 1081, 1228
BccI CCATC 7 cut(s) 38, 146, 659, 686, 784, 788, 1168
BceAI ACGGC 3 cut(s) 163, 185, 307
BcgI CGANNNNNNTGC 2 cut(s) 897, 931
BciT130I CCWGG 2 cut(s) 35, 749
BciVI GTATCC 1 cut(s) 387
BclI TGATCA 1 cut(s) 1125
BcnI CCSGG 2 cut(s) 172, 429
BcoDI GTCTC 6 cut(s) 59, 292, 363, 445, 707, 1196
BfmI CTRYAG 1 cut(s) 1089
BfoI RGCGCY 3 cut(s) 124, 230, 239
BfuI GTATCC 1 cut(s) 387
BisI GCNGC 9 cut(s) 198, 221, 230, 239, 249, 252, 336, 1095, 1242
BlpI GCTNAGC 1 cut(s) 176
BlsI GCNGC 9 cut(s) 199, 222, 231, 240, 250, 253, 337, 1096, 1243
Bme1390I CCNGG 4 cut(s) 35, 172, 429, 749
Bme18I GGWCC 2 cut(s) 26, 893
BmeT110I CYCGRG 2 cut(s) 483, 753
BmgT120I GGNCC 4 cut(s) 26, 751, 893, 1200
BmiI GGNNCC 6 cut(s) 27, 28, 95, 237, 311, 1012
BmrFI CCNGG 4 cut(s) 35, 172, 429, 749
BmrI ACTGGG 1 cut(s) 774
BmsI GCATC 2 cut(s) 520, 817
BmuI ACTGGG 1 cut(s) 774
BpiI GAAGAC 2 cut(s) 173, 270
BpmI CTGGAG 2 cut(s) 252, 780
Bpu1102I GCTNAGC 1 cut(s) 176
Bpu14I TTCGAA 1 cut(s) 814
BpuMI CCSGG 2 cut(s) 172, 429
BsaBI GATNNNNATC 1 cut(s) 98
BsaHI GRCGYC 3 cut(s) 183, 236, 408
BsaI GGTCTC 2 cut(s) 59, 292
BsaJI CCNNGG 2 cut(s) 34, 747
BsaXI ACNNNNNCTCC 2 cut(s) 753, 783
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 40, 417, 418, 666, 929
Bse118I RCCGGY 2 cut(s) 232, 1202
Bse1I ACTGG 2 cut(s) 269, 780
Bse21I CCTNAGG 1 cut(s) 243
Bse3DI GCAATG 1 cut(s) 429
Bse8I GATNNNNATC 1 cut(s) 98
BseBI CCWGG 2 cut(s) 35, 749
BseDI CCNNGG 2 cut(s) 34, 747
BseGI GGATG 3 cut(s) 30, 437, 799
BseJI GATNNNNATC 1 cut(s) 98
BseLI CCNNNNNNNGG 6 cut(s) 35, 40, 417, 418, 666, 929
BseMI GCAATG 1 cut(s) 429
BseMII CTCAG 4 cut(s) 70, 190, 320, 1207
BseNI ACTGG 2 cut(s) 269, 780
BseRI GAGGAG 1 cut(s) 1071
BseXI GCAGC 4 cut(s) 184, 322, 1081, 1228
BseYI CCCAGC 1 cut(s) 256
BshFI GGCC 3 cut(s) 248, 752, 1202
BshNI GGYRCC 1 cut(s) 235
BsiHKCI CYCGRG 2 cut(s) 483, 753
BsiSI CCGG 5 cut(s) 172, 233, 307, 428, 1203
BslFI GGGAC 2 cut(s) 39, 762
BslI CCNNNNNNNGG 6 cut(s) 35, 40, 417, 418, 666, 929
BsmAI GTCTC 6 cut(s) 59, 292, 363, 445, 707, 1196
BsmFI GGGAC 2 cut(s) 39, 762
BsnI GGCC 3 cut(s) 248, 752, 1202
Bso31I GGTCTC 2 cut(s) 59, 292
BsoBI CYCGRG 2 cut(s) 483, 753
Bsp119I TTCGAA 1 cut(s) 814
Bsp143I GATC 6 cut(s) 93, 155, 288, 619, 649, 1125
Bsp1720I GCTNAGC 1 cut(s) 176
BspANI GGCC 3 cut(s) 248, 752, 1202
BspCNI CTCAG 4 cut(s) 69, 189, 321, 1206
BspLI GGNNCC 6 cut(s) 27, 28, 95, 237, 311, 1012
BspPI GGATC 4 cut(s) 88, 101, 163, 644
BspT104I TTCGAA 1 cut(s) 814
BspT107I GGYRCC 1 cut(s) 235
BspTNI GGTCTC 2 cut(s) 59, 292
BsrDI GCAATG 1 cut(s) 429
BsrFI RCCGGY 2 cut(s) 232, 1202
BsrI ACTGG 2 cut(s) 269, 780
BssAI RCCGGY 2 cut(s) 232, 1202
BssECI CCNNGG 2 cut(s) 34, 747
BssMI GATC 6 cut(s) 93, 155, 288, 619, 649, 1125
BssNI GRCGYC 3 cut(s) 183, 236, 408
Bst2UI CCWGG 2 cut(s) 35, 749
Bst4CI ACNGT 3 cut(s) 597, 677, 718
Bst6I CTCTTC 2 cut(s) 462, 1259
BstACI GRCGYC 3 cut(s) 183, 236, 408
BstAPI GCANNNNNTGC 1 cut(s) 875
BstBI TTCGAA 1 cut(s) 814
BstC8I GCNNGC 6 cut(s) 142, 225, 234, 738, 1035, 1239
BstDEI CTNAG 5 cut(s) 56, 176, 243, 329, 1193
BstF5I GGATG 3 cut(s) 30, 437, 799
BstH2I RGCGCY 3 cut(s) 124, 230, 239
BstHHI GCGC 3 cut(s) 123, 229, 238
BstKTI GATC 6 cut(s) 96, 158, 291, 622, 652, 1128
BstMAI GTCTC 6 cut(s) 59, 292, 363, 445, 707, 1196
BstMBI GATC 6 cut(s) 93, 155, 288, 619, 649, 1125
BstNI CCWGG 2 cut(s) 35, 749
BstNSI RCATGY 1 cut(s) 848
BstSCI CCNGG 4 cut(s) 33, 170, 427, 747
BstSFI CTRYAG 1 cut(s) 1089
BstV1I GCAGC 4 cut(s) 184, 322, 1081, 1228
BstV2I GAAGAC 2 cut(s) 173, 270
BstX2I RGATCY 2 cut(s) 93, 649
BstYI RGATCY 2 cut(s) 93, 649
Bsu36I CCTNAGG 1 cut(s) 243
BsuI GTATCC 1 cut(s) 387
BsuRI GGCC 3 cut(s) 248, 752, 1202
BtgZI GCGATG 1 cut(s) 165
BtsCI GGATG 3 cut(s) 30, 437, 799
BtsIMutI CAGTG 1 cut(s) 787
Cac8I GCNNGC 6 cut(s) 142, 225, 234, 738, 1035, 1239
CaiI CAGNNNCTG 1 cut(s) 40
CfoI GCGC 3 cut(s) 123, 229, 238
Cfr10I RCCGGY 2 cut(s) 232, 1202
Cfr13I GGNCC 4 cut(s) 26, 751, 893, 1200
CseI GACGC 2 cut(s) 191, 416
Csp6I GTAC 2 cut(s) 562, 719
CspCI CAANNNNNGTGG 2 cut(s) 1117, 1152
CviAII CATG 7 cut(s) 392, 455, 671, 787, 845, 856, 1186
CviQI GTAC 2 cut(s) 562, 719
DdeI CTNAG 5 cut(s) 56, 176, 243, 329, 1193
DinI GGCGCC 1 cut(s) 237
DpnI GATC 6 cut(s) 95, 157, 290, 621, 651, 1127
DpnII GATC 6 cut(s) 93, 155, 288, 619, 649, 1125
DrdI GACNNNNNNGTC 1 cut(s) 680
DseDI GACNNNNNNGTC 1 cut(s) 680
Eam1104I CTCTTC 2 cut(s) 462, 1259
EarI CTCTTC 2 cut(s) 462, 1259
Eco31I GGTCTC 2 cut(s) 59, 292
Eco32I GATATC 2 cut(s) 1018, 1054
Eco47I GGWCC 2 cut(s) 26, 893
Eco57I CTGAAG 2 cut(s) 852, 1026
Eco81I CCTNAGG 1 cut(s) 243
Eco88I CYCGRG 2 cut(s) 483, 753
EcoO109I RGGNCCY 1 cut(s) 26
EcoRII CCWGG 2 cut(s) 33, 747
EcoRV GATATC 2 cut(s) 1018, 1054
EgeI GGCGCC 1 cut(s) 237
EheI GGCGCC 1 cut(s) 237
FaeI CATG 7 cut(s) 395, 458, 674, 790, 848, 859, 1189
FaqI GGGAC 2 cut(s) 39, 762
FatI CATG 7 cut(s) 391, 454, 670, 786, 844, 855, 1185
FauI CCCGC 4 cut(s) 70, 119, 225, 967
FbaI TGATCA 1 cut(s) 1125
Fnu4HI GCNGC 9 cut(s) 198, 221, 230, 239, 249, 252, 336, 1095, 1242
FokI GGATG 3 cut(s) 17, 444, 806
Fsp4HI GCNGC 9 cut(s) 198, 221, 230, 239, 249, 252, 336, 1095, 1242
GlaI GCGC 3 cut(s) 122, 228, 237
GluI GCNGC 9 cut(s) 198, 221, 230, 239, 249, 252, 336, 1095, 1242
GsaI CCCAGC 1 cut(s) 260
GsuI CTGGAG 2 cut(s) 252, 780
HaeII RGCGCY 3 cut(s) 124, 230, 239
HaeIII GGCC 3 cut(s) 248, 752, 1202
HapII CCGG 5 cut(s) 172, 233, 307, 428, 1203
HgaI GACGC 2 cut(s) 191, 416
HhaI GCGC 3 cut(s) 123, 229, 238
Hin1I GRCGYC 3 cut(s) 183, 236, 408
Hin1II CATG 7 cut(s) 395, 458, 674, 790, 848, 859, 1189
Hin6I GCGC 3 cut(s) 121, 227, 236
HinP1I GCGC 3 cut(s) 121, 227, 236
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HinfI GANTC 6 cut(s) 541, 775, 914, 919, 1001, 1178
HpaI GTTAAC 1 cut(s) 19
HpaII CCGG 5 cut(s) 172, 233, 307, 428, 1203
HphI GGTGA 6 cut(s) 121, 563, 944, 1039, 1124, 1271
Hpy166II GTNNAC 1 cut(s) 19
Hpy188III TCNNGA 9 cut(s) 41, 103, 163, 344, 401, 485, 527, 824, 902
Hpy8I GTNNAC 1 cut(s) 19
Hpy99I CGWCG 4 cut(s) 149, 185, 328, 410
HpyAV CCTTC 5 cut(s) 309, 389, 827, 1001, 1191
HpyCH4III ACNGT 3 cut(s) 597, 677, 718
HpyCH4IV ACGT 4 cut(s) 21, 48, 925, 1212
HpyCH4V TGCA 4 cut(s) 476, 878, 1097, 1237
HpyF3I CTNAG 5 cut(s) 56, 176, 243, 329, 1193
HpySE526I ACGT 4 cut(s) 21, 48, 925, 1212
Hsp92I GRCGYC 3 cut(s) 183, 236, 408
Hsp92II CATG 7 cut(s) 395, 458, 674, 790, 848, 859, 1189
HspAI GCGC 3 cut(s) 121, 227, 236
KasI GGCGCC 1 cut(s) 235
KflI GGGWCCC 1 cut(s) 26
KroI GCCGGC 1 cut(s) 232
KroNI GCCGGC 1 cut(s) 234
Ksp22I TGATCA 1 cut(s) 1125
KspAI GTTAAC 1 cut(s) 19
Kzo9I GATC 6 cut(s) 93, 155, 288, 619, 649, 1125
LmnI GCTCC 3 cut(s) 761, 806, 1010
Lsp1109I GCAGC 4 cut(s) 184, 322, 1081, 1228
LweI GCATC 2 cut(s) 520, 817
MaeII ACGT 4 cut(s) 21, 48, 925, 1212
MaeIII GTNAC 2 cut(s) 782, 932
MalI GATC 6 cut(s) 95, 157, 290, 621, 651, 1127
MboI GATC 6 cut(s) 93, 155, 288, 619, 649, 1125
MboII GAAGA 7 cut(s) 178, 270, 479, 550, 701, 1007, 1172
MfeI CAATTG 1 cut(s) 12
MflI RGATCY 2 cut(s) 93, 649
MluCI AATT 5 cut(s) 12, 82, 367, 725, 964
Mly113I GGCGCC 1 cut(s) 236
MlyI GAGTC 3 cut(s) 784, 908, 1010
MmeI TCCRAC 2 cut(s) 71, 569
MreI CGCCGGCG 1 cut(s) 232
MroNI GCCGGC 1 cut(s) 232
MroXI GAANNNNTTC 1 cut(s) 837
MseI TTAA 1 cut(s) 18
MslI CAYNNNNRTG 1 cut(s) 1186
MspA1I CMGCKG 1 cut(s) 260
MspI CCGG 5 cut(s) 172, 233, 307, 428, 1203
MspR9I CCNGG 4 cut(s) 35, 172, 429, 749
MunI CAATTG 1 cut(s) 12
MvaI CCWGG 2 cut(s) 35, 749
NaeI GCCGGC 1 cut(s) 234
NarI GGCGCC 1 cut(s) 236
NciI CCSGG 2 cut(s) 172, 429
NdeII GATC 6 cut(s) 93, 155, 288, 619, 649, 1125
NgoMIV GCCGGC 1 cut(s) 232
NlaIII CATG 7 cut(s) 395, 458, 674, 790, 848, 859, 1189
NlaIV GGNNCC 6 cut(s) 27, 28, 95, 237, 311, 1012
NmeAIII GCCGAG 1 cut(s) 211
NmuCI GTSAC 2 cut(s) 782, 932
NspI RCATGY 1 cut(s) 848
NspV TTCGAA 1 cut(s) 814
OliI CACNNNNGTG 1 cut(s) 1186
PaeR7I CTCGAG 1 cut(s) 483
PcsI WCGNNNNNNNCGW 2 cut(s) 189, 310
PdiI GCCGGC 1 cut(s) 234
PdmI GAANNNNTTC 1 cut(s) 837
PfeI GAWTC 3 cut(s) 541, 919, 1178
PflMI CCANNNNNTGG 2 cut(s) 40, 929
PkrI GCNGC 9 cut(s) 199, 222, 231, 240, 250, 253, 337, 1096, 1243
PleI GAGTC 3 cut(s) 783, 908, 1009
PluTI GGCGCC 1 cut(s) 239
PpsI GAGTC 3 cut(s) 783, 908, 1009
PpuMI RGGWCCY 1 cut(s) 26
Psp5II RGGWCCY 1 cut(s) 26
Psp6I CCWGG 2 cut(s) 33, 747
PspFI CCCAGC 1 cut(s) 256
PspGI CCWGG 2 cut(s) 33, 747
PspN4I GGNNCC 6 cut(s) 27, 28, 95, 237, 311, 1012
PspPI GGNCC 4 cut(s) 26, 751, 893, 1200
PspPPI RGGWCCY 1 cut(s) 26
PstNI CAGNNNCTG 1 cut(s) 40
PsuI RGATCY 2 cut(s) 93, 649
PvuII CAGCTG 1 cut(s) 260
RsaI GTAC 2 cut(s) 563, 720
RsaNI GTAC 2 cut(s) 562, 719
RseI CAYNNNNRTG 1 cut(s) 1186
SaqAI TTAA 1 cut(s) 18
SatI GCNGC 9 cut(s) 198, 221, 230, 239, 249, 252, 336, 1095, 1242
Sau3AI GATC 6 cut(s) 93, 155, 288, 619, 649, 1125
Sau96I GGNCC 4 cut(s) 26, 751, 893, 1200
SchI GAGTC 3 cut(s) 784, 908, 1010
ScrFI CCNGG 4 cut(s) 35, 172, 429, 749
SfaNI GCATC 2 cut(s) 520, 817
SfcI CTRYAG 1 cut(s) 1089
SfoI GGCGCC 1 cut(s) 237
Sfr274I CTCGAG 1 cut(s) 483
SfuI TTCGAA 1 cut(s) 814
SgrAI CRCCGGYG 1 cut(s) 232
SinI GGWCC 2 cut(s) 26, 893
SlaI CTCGAG 1 cut(s) 483
SmiMI CAYNNNNRTG 1 cut(s) 1186
SmlI CTYRAG 1 cut(s) 483
SmoI CTYRAG 1 cut(s) 483
Sse9I AATT 5 cut(s) 12, 82, 367, 725, 964
SspDI GGCGCC 1 cut(s) 235
StyD4I CCNGG 4 cut(s) 33, 170, 427, 747
TaaI ACNGT 3 cut(s) 597, 677, 718
TaiI ACGT 4 cut(s) 24, 51, 928, 1215
TaqI TCGA 4 cut(s) 484, 586, 814, 917
TasI AATT 5 cut(s) 12, 82, 367, 725, 964
TatI WGTACW 1 cut(s) 718
TauI GCSGC 5 cut(s) 223, 232, 241, 251, 254
TfiI GAWTC 3 cut(s) 541, 919, 1178
Tru1I TTAA 1 cut(s) 18
Tru9I TTAA 1 cut(s) 18
TscAI CASTG 1 cut(s) 787
TseFI GTSAC 2 cut(s) 782, 932
TseI GCWGC 4 cut(s) 197, 335, 1094, 1241
Tsp45I GTSAC 2 cut(s) 782, 932
TspDTI ATGAA 5 cut(s) 408, 570, 873, 968, 1008
TspRI CASTG 1 cut(s) 787
Van91I CCANNNNNTGG 2 cut(s) 40, 929
VpaK11BI GGWCC 2 cut(s) 26, 893
XceI RCATGY 1 cut(s) 848
XcmI CCANNNNNNNNNTGG 3 cut(s) 37, 755, 787
XhoI CTCGAG 1 cut(s) 483
XmnI GAANNNNTTC 1 cut(s) 837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.