pycom15g31410

Histone chaperone domain CHZ

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
29872724 .. 29875551
2828 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g31410.1

Sequence Viewer

Length: 243 bp
ATGGCGGAGGATGCGCAAGATAGCGAGAGCCCTCTGAAGGAGGCGCACGATGTCCAGTCCCAGATTGAGAGTGCTATGCGCTCACGCGTCCCTTACTTCAAGGAACAATCCGATTCTTTGACTTTTGAGGGCGTCCGAAGAGTCTTAGAGAAAGACCTGGGCTTGGAGACATTTGCGTTGGATGTGCACAAAAGATTTGTCAAGGAACATTTGGTGGAGTTGGGTCTTAGAAGGTGCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

81

Amino Acids

9.32

Weight (kDa)

5.31

Isoelectric Point (pI)

88.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024322)

Species Orthologous Gene IDs
malus_domestica MD02G1293800.v1.1 MD09G1164000.v1.1
pyrus_communis pycom15g31410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 15
AccII CGCG 1 cut(s) 87
AciI CCGC 1 cut(s) 5
AcuI CTGAAG 1 cut(s) 56
AcyI GRCGYC 1 cut(s) 132
AfiI CCNNNNNNNGG 2 cut(s) 37, 163
AflIII ACRYGT 1 cut(s) 85
AgsI TTSAA 1 cut(s) 100
AjnI CCWGG 1 cut(s) 156
Alw21I GWGCWC 1 cut(s) 189
Alw26I GTCTC 1 cut(s) 161
Alw44I GTGCAC 1 cut(s) 185
ApaLI GTGCAC 1 cut(s) 185
ArsI GACNNNNNNTTYG 2 cut(s) 183, 215
AspLEI GCGC 3 cut(s) 16, 46, 81
BaeGI GKGCMC 1 cut(s) 189
BanII GRGCYC 1 cut(s) 32
Bbv12I GWGCWC 1 cut(s) 189
BciT130I CCWGG 1 cut(s) 158
BcoDI GTCTC 1 cut(s) 161
Bme1390I CCNGG 1 cut(s) 158
BmrFI CCNGG 1 cut(s) 158
BsaHI GRCGYC 1 cut(s) 132
BsaJI CCNNGG 1 cut(s) 157
Bsc4I CCNNNNNNNGG 2 cut(s) 37, 163
Bse1I ACTGG 1 cut(s) 55
BseBI CCWGG 1 cut(s) 158
BseDI CCNNGG 1 cut(s) 157
BseGI GGATG 2 cut(s) 16, 187
BseLI CCNNNNNNNGG 2 cut(s) 37, 163
BseNI ACTGG 1 cut(s) 55
BseSI GKGCMC 1 cut(s) 189
Bsh1236I CGCG 1 cut(s) 87
BsiHKAI GWGCWC 1 cut(s) 189
BslFI GGGAC 2 cut(s) 43, 74
BslI CCNNNNNNNGG 2 cut(s) 37, 163
BsmAI GTCTC 1 cut(s) 161
BsmFI GGGAC 2 cut(s) 43, 74
Bsp1286I GDGCHC 2 cut(s) 32, 189
BspACI CCGC 1 cut(s) 5
BspFNI CGCG 1 cut(s) 87
BsrI ACTGG 1 cut(s) 55
BssECI CCNNGG 1 cut(s) 157
BssNI GRCGYC 1 cut(s) 132
Bst2UI CCWGG 1 cut(s) 158
Bst6I CTCTTC 1 cut(s) 133
BstACI GRCGYC 1 cut(s) 132
BstDEI CTNAG 2 cut(s) 145, 227
BstF5I GGATG 2 cut(s) 16, 187
BstFNI CGCG 1 cut(s) 87
BstHHI GCGC 3 cut(s) 16, 46, 81
BstMAI GTCTC 1 cut(s) 161
BstMWI GCNNNNNNNGC 1 cut(s) 11
BstNI CCWGG 1 cut(s) 158
BstSCI CCNGG 1 cut(s) 156
BstSLI GKGCMC 1 cut(s) 189
BstUI CGCG 1 cut(s) 87
BtsCI GGATG 2 cut(s) 16, 187
CfoI GCGC 3 cut(s) 16, 46, 81
CseI GACGC 2 cut(s) 76, 121
CviJI RGCY 2 cut(s) 30, 162
CviKI_1 RGCY 2 cut(s) 30, 162
DdeI CTNAG 2 cut(s) 145, 227
Eam1104I CTCTTC 1 cut(s) 133
EarI CTCTTC 1 cut(s) 133
EciI GGCGGA 1 cut(s) 20
Eco24I GRGCYC 1 cut(s) 32
Eco57I CTGAAG 1 cut(s) 56
EcoRII CCWGG 1 cut(s) 156
EcoT38I GRGCYC 1 cut(s) 32
FaiI YATR 1 cut(s) 77
FaqI GGGAC 2 cut(s) 43, 74
FokI GGATG 2 cut(s) 23, 194
FriOI GRGCYC 1 cut(s) 32
FspI TGCGCA 1 cut(s) 15
GlaI GCGC 3 cut(s) 15, 45, 80
HgaI GACGC 2 cut(s) 76, 121
HhaI GCGC 3 cut(s) 16, 46, 81
Hin1I GRCGYC 1 cut(s) 132
Hin6I GCGC 3 cut(s) 14, 44, 79
HinP1I GCGC 3 cut(s) 14, 44, 79
HinfI GANTC 2 cut(s) 113, 141
Hpy166II GTNNAC 1 cut(s) 187
Hpy188I TCNGA 3 cut(s) 36, 112, 137
Hpy8I GTNNAC 1 cut(s) 187
HpyAV CCTTC 2 cut(s) 31, 225
HpyCH4V TGCA 1 cut(s) 187
HpyF10VI GCNNNNNNNGC 1 cut(s) 11
HpyF3I CTNAG 2 cut(s) 145, 227
Hsp92I GRCGYC 1 cut(s) 132
HspAI GCGC 3 cut(s) 14, 44, 79
LpnPI CCDG 5 cut(s) 68, 74, 143, 170, 223
MboII GAAGA 1 cut(s) 150
MhlI GDGCHC 2 cut(s) 32, 189
MluI ACGCGT 1 cut(s) 85
MlyI GAGTC 1 cut(s) 150
MmeI TCCRAC 1 cut(s) 159
MnlI CCTC 3 cut(s) 34, 42, 121
MspR9I CCNGG 1 cut(s) 158
MvaI CCWGG 1 cut(s) 158
MvnI CGCG 1 cut(s) 87
MwoI GCNNNNNNNGC 1 cut(s) 11
NsbI TGCGCA 1 cut(s) 15
PfeI GAWTC 1 cut(s) 113
PleI GAGTC 1 cut(s) 149
PpsI GAGTC 1 cut(s) 149
Psp6I CCWGG 1 cut(s) 156
PspGI CCWGG 1 cut(s) 156
SchI GAGTC 1 cut(s) 150
ScrFI CCNGG 1 cut(s) 158
SduI GDGCHC 2 cut(s) 32, 189
SetI ASST 2 cut(s) 159, 236
SsiI CCGC 1 cut(s) 5
StyD4I CCNGG 1 cut(s) 156
TfiI GAWTC 1 cut(s) 113
VneI GTGCAC 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.