Amino acid permease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G49630 |
| fragaria_vesca | FvH4_5g33530 |
| malus_domestica | MD08G1211100.v1.1 |
| prunus_persica | Prupe.1G543000_v2.0.a1 |
| pyrus_communis | pycom15g35510 |
| rosa_chinensis | RchiOBHm_Chr7g0232341 |
| rosa_laevigata | RLG00000001355 |
| rosa_multiflora | Rmu_sc0011325.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00228450 |
| rosa_rugosa | Rorug07G0272700 |
| rosa_samantha | Rh7AG426600 |
| rosa_wichuraiana | Rw7G035370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1257, 1411 |
| AccI | GTMKAC | 1 cut(s) | 1452 |
| AciI | CCGC | 5 cut(s) | 480, 623, 1071, 1311, 1371 |
| AcoI | YGGCCR | 4 cut(s) | 274, 1259, 1380, 1439 |
| AcuI | CTGAAG | 1 cut(s) | 1318 |
| AfaI | GTAC | 5 cut(s) | 212, 280, 513, 1289, 1472 |
| AgeI | ACCGGT | 1 cut(s) | 1124 |
| AgsI | TTSAA | 2 cut(s) | 1402, 1580 |
| AjnI | CCWGG | 5 cut(s) | 354, 1203, 1377, 1410, 1508 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1487, 1519 |
| AluBI | AGCT | 6 cut(s) | 149, 371, 544, 1091, 1533, 1565 |
| AluI | AGCT | 6 cut(s) | 149, 371, 544, 1091, 1533, 1565 |
| Alw21I | GWGCWC | 2 cut(s) | 222, 316 |
| Alw26I | GTCTC | 2 cut(s) | 468, 924 |
| Alw44I | GTGCAC | 1 cut(s) | 312 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 395, 1568 |
| ApaLI | GTGCAC | 1 cut(s) | 312 |
| ApeKI | GCWGC | 7 cut(s) | 541, 773, 1088, 1427, 1562, 1565, 1568 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 923, 955 |
| AsiGI | ACCGGT | 1 cut(s) | 1124 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 914 |
| AspLEI | GCGC | 1 cut(s) | 1250 |
| AspS9I | GGNCC | 4 cut(s) | 107, 339, 392, 839 |
| AsuC2I | CCSGG | 4 cut(s) | 292, 343, 998, 1110 |
| AsuHPI | GGTGA | 9 cut(s) | 257, 313, 415, 637, 984, 1114, 1375, 1498, 1558 |
| AvaII | GGWCC | 3 cut(s) | 107, 339, 839 |
| BaeGI | GKGCMC | 1 cut(s) | 316 |
| BalI | TGGCCA | 3 cut(s) | 1261, 1382, 1441 |
| BauI | CACGAG | 1 cut(s) | 754 |
| BbsI | GAAGAC | 2 cut(s) | 206, 1201 |
| Bbv12I | GWGCWC | 2 cut(s) | 222, 316 |
| BbvI | GCAGC | 7 cut(s) | 553, 785, 1100, 1439, 1552, 1555, 1574 |
| BccI | CCATC | 5 cut(s) | 175, 266, 375, 617, 1190 |
| BceAI | ACGGC | 3 cut(s) | 261, 342, 761 |
| BciT130I | CCWGG | 5 cut(s) | 356, 1205, 1379, 1412, 1510 |
| BcnI | CCSGG | 4 cut(s) | 292, 343, 998, 1110 |
| BcoDI | GTCTC | 2 cut(s) | 468, 924 |
| BfaI | CTAG | 4 cut(s) | 204, 309, 524, 1029 |
| BfmI | CTRYAG | 1 cut(s) | 870 |
| BisI | GCNGC | 8 cut(s) | 481, 542, 774, 1089, 1428, 1563, 1566, 1569 |
| BlsI | GCNGC | 8 cut(s) | 482, 543, 775, 1090, 1429, 1564, 1567, 1570 |
| Bme1390I | CCNGG | 9 cut(s) | 292, 343, 356, 998, 1110, 1205, 1379, 1412, 1510 |
| Bme18I | GGWCC | 3 cut(s) | 107, 339, 839 |
| BmgT120I | GGNCC | 4 cut(s) | 107, 339, 392, 839 |
| BmiI | GGNNCC | 2 cut(s) | 340, 1075 |
| BmrFI | CCNGG | 9 cut(s) | 292, 343, 356, 998, 1110, 1205, 1379, 1412, 1510 |
| BmsI | GCATC | 4 cut(s) | 614, 720, 1185, 1580 |
| BpiI | GAAGAC | 2 cut(s) | 206, 1201 |
| BpuMI | CCSGG | 4 cut(s) | 292, 343, 998, 1110 |
| BsaI | GGTCTC | 1 cut(s) | 468 |
| BsaJI | CCNNGG | 4 cut(s) | 342, 354, 808, 996 |
| BsaWI | WCCGGW | 2 cut(s) | 863, 1124 |
| Bse118I | RCCGGY | 1 cut(s) | 1124 |
| Bse1I | ACTGG | 1 cut(s) | 190 |
| Bse3DI | GCAATG | 2 cut(s) | 933, 1038 |
| BseBI | CCWGG | 5 cut(s) | 356, 1205, 1379, 1412, 1510 |
| BseDI | CCNNGG | 4 cut(s) | 342, 354, 808, 996 |
| BseGI | GGATG | 8 cut(s) | 386, 434, 511, 605, 711, 1182, 1524, 1571 |
| BseMI | GCAATG | 2 cut(s) | 933, 1038 |
| BseMII | CTCAG | 5 cut(s) | 386, 572, 739, 1520, 1614 |
| BseNI | ACTGG | 1 cut(s) | 190 |
| BseRI | GAGGAG | 1 cut(s) | 48 |
| BseSI | GKGCMC | 1 cut(s) | 316 |
| BseXI | GCAGC | 7 cut(s) | 553, 785, 1100, 1439, 1552, 1555, 1574 |
| BseYI | CCCAGC | 1 cut(s) | 1533 |
| BsgI | GTGCAG | 1 cut(s) | 560 |
| BshTI | ACCGGT | 1 cut(s) | 1124 |
| BsiHKAI | GWGCWC | 2 cut(s) | 222, 316 |
| BsiSI | CCGG | 6 cut(s) | 291, 342, 864, 998, 1110, 1125 |
| BslFI | GGGAC | 2 cut(s) | 307, 337 |
| BsmAI | GTCTC | 2 cut(s) | 468, 924 |
| BsmFI | GGGAC | 2 cut(s) | 307, 337 |
| Bso31I | GGTCTC | 1 cut(s) | 468 |
| Bsp1286I | GDGCHC | 2 cut(s) | 222, 316 |
| Bsp1407I | TGTACA | 2 cut(s) | 210, 1470 |
| BspACI | CCGC | 5 cut(s) | 480, 623, 1071, 1311, 1371 |
| BspCNI | CTCAG | 5 cut(s) | 385, 571, 738, 1521, 1615 |
| BspLI | GGNNCC | 2 cut(s) | 340, 1075 |
| BspTNI | GGTCTC | 1 cut(s) | 468 |
| BsrDI | GCAATG | 2 cut(s) | 933, 1038 |
| BsrFI | RCCGGY | 1 cut(s) | 1124 |
| BsrGI | TGTACA | 2 cut(s) | 210, 1470 |
| BsrI | ACTGG | 1 cut(s) | 190 |
| BssAI | RCCGGY | 1 cut(s) | 1124 |
| BssECI | CCNNGG | 4 cut(s) | 342, 354, 808, 996 |
| BssSI | CACGAG | 1 cut(s) | 754 |
| BssT1I | CCWWGG | 1 cut(s) | 808 |
| Bst2BI | CACGAG | 1 cut(s) | 754 |
| Bst2UI | CCWGG | 5 cut(s) | 356, 1205, 1379, 1412, 1510 |
| Bst4CI | ACNGT | 6 cut(s) | 245, 455, 874, 961, 1257, 1450 |
| Bst6I | CTCTTC | 2 cut(s) | 623, 1013 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 395, 1568 |
| BstAUI | TGTACA | 2 cut(s) | 210, 1470 |
| BstC8I | GCNNGC | 5 cut(s) | 187, 396, 447, 709, 1217 |
| BstDEI | CTNAG | 6 cut(s) | 143, 372, 558, 725, 1529, 1623 |
| BstEII | GGTNACC | 1 cut(s) | 1588 |
| BstF5I | GGATG | 8 cut(s) | 386, 434, 511, 605, 711, 1182, 1524, 1571 |
| BstHHI | GCGC | 1 cut(s) | 1250 |
| BstMAI | GTCTC | 2 cut(s) | 468, 924 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 395, 1379, 1539, 1568 |
| BstNI | CCWGG | 5 cut(s) | 356, 1205, 1379, 1412, 1510 |
| BstNSI | RCATGY | 2 cut(s) | 211, 848 |
| BstPI | GGTNACC | 1 cut(s) | 1588 |
| BstSCI | CCNGG | 9 cut(s) | 290, 341, 354, 996, 1108, 1203, 1377, 1410, 1508 |
| BstSFI | CTRYAG | 1 cut(s) | 870 |
| BstSLI | GKGCMC | 1 cut(s) | 316 |
| BstV1I | GCAGC | 7 cut(s) | 553, 785, 1100, 1439, 1552, 1555, 1574 |
| BstV2I | GAAGAC | 2 cut(s) | 206, 1201 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 616, 926 |
| BtgZI | GCGATG | 1 cut(s) | 1162 |
| BtsCI | GGATG | 8 cut(s) | 386, 434, 511, 605, 711, 1182, 1524, 1571 |
| BtsIMutI | CAGTG | 4 cut(s) | 38, 983, 1442, 1620 |
| Cac8I | GCNNGC | 5 cut(s) | 187, 396, 447, 709, 1217 |
| CaiI | CAGNNNCTG | 2 cut(s) | 395, 1568 |
| CfoI | GCGC | 1 cut(s) | 1250 |
| Cfr10I | RCCGGY | 1 cut(s) | 1124 |
| Cfr13I | GGNCC | 4 cut(s) | 107, 339, 392, 839 |
| CseI | GACGC | 1 cut(s) | 1312 |
| CsiI | ACCWGGT | 1 cut(s) | 1203 |
| Csp6I | GTAC | 5 cut(s) | 211, 279, 512, 1288, 1471 |
| CspAI | ACCGGT | 1 cut(s) | 1124 |
| CviQI | GTAC | 5 cut(s) | 211, 279, 512, 1288, 1471 |
| DdeI | CTNAG | 6 cut(s) | 143, 372, 558, 725, 1529, 1623 |
| EaeI | YGGCCR | 4 cut(s) | 274, 1259, 1380, 1439 |
| Eam1104I | CTCTTC | 2 cut(s) | 623, 1013 |
| EarI | CTCTTC | 2 cut(s) | 623, 1013 |
| Eco130I | CCWWGG | 1 cut(s) | 808 |
| Eco147I | AGGCCT | 1 cut(s) | 807 |
| Eco31I | GGTCTC | 1 cut(s) | 468 |
| Eco32I | GATATC | 1 cut(s) | 1162 |
| Eco47I | GGWCC | 3 cut(s) | 107, 339, 839 |
| Eco57I | CTGAAG | 1 cut(s) | 1318 |
| Eco91I | GGTNACC | 1 cut(s) | 1588 |
| EcoO109I | RGGNCCY | 1 cut(s) | 392 |
| EcoO65I | GGTNACC | 1 cut(s) | 1588 |
| EcoRII | CCWGG | 5 cut(s) | 354, 1203, 1377, 1410, 1508 |
| EcoRV | GATATC | 1 cut(s) | 1162 |
| EcoT14I | CCWWGG | 1 cut(s) | 808 |
| EcoT22I | ATGCAT | 1 cut(s) | 952 |
| ErhI | CCWWGG | 1 cut(s) | 808 |
| FaqI | GGGAC | 2 cut(s) | 307, 337 |
| FauNDI | CATATG | 1 cut(s) | 1357 |
| FblI | GTMKAC | 1 cut(s) | 1452 |
| Fnu4HI | GCNGC | 8 cut(s) | 481, 542, 774, 1089, 1428, 1563, 1566, 1569 |
| FokI | GGATG | 8 cut(s) | 393, 421, 518, 592, 698, 1169, 1531, 1558 |
| Fsp4HI | GCNGC | 8 cut(s) | 481, 542, 774, 1089, 1428, 1563, 1566, 1569 |
| FspBI | CTAG | 4 cut(s) | 204, 309, 524, 1029 |
| GlaI | GCGC | 1 cut(s) | 1249 |
| GluI | GCNGC | 8 cut(s) | 481, 542, 774, 1089, 1428, 1563, 1566, 1569 |
| GsaI | CCCAGC | 1 cut(s) | 1537 |
| HapII | CCGG | 6 cut(s) | 291, 342, 864, 998, 1110, 1125 |
| HgaI | GACGC | 1 cut(s) | 1312 |
| HhaI | GCGC | 1 cut(s) | 1250 |
| Hin6I | GCGC | 1 cut(s) | 1248 |
| HinP1I | GCGC | 1 cut(s) | 1248 |
| HincII | GTYRAC | 1 cut(s) | 1327 |
| HindII | GTYRAC | 1 cut(s) | 1327 |
| HinfI | GANTC | 3 cut(s) | 43, 1134, 1525 |
| HpaII | CCGG | 6 cut(s) | 291, 342, 864, 998, 1110, 1125 |
| HphI | GGTGA | 9 cut(s) | 257, 313, 415, 637, 984, 1114, 1375, 1498, 1558 |
| Hpy166II | GTNNAC | 6 cut(s) | 265, 314, 839, 1327, 1453, 1500 |
| Hpy188I | TCNGA | 7 cut(s) | 198, 573, 898, 1133, 1337, 1424, 1530 |
| Hpy188III | TCNNGA | 5 cut(s) | 158, 467, 877, 1459, 1600 |
| Hpy8I | GTNNAC | 6 cut(s) | 265, 314, 839, 1327, 1453, 1500 |
| Hpy99I | CGWCG | 1 cut(s) | 272 |
| HpyAV | CCTTC | 5 cut(s) | 39, 421, 436, 1342, 1624 |
| HpyCH4III | ACNGT | 6 cut(s) | 245, 455, 874, 961, 1257, 1450 |
| HpyCH4IV | ACGT | 1 cut(s) | 261 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 395, 1379, 1539, 1568 |
| HpyF3I | CTNAG | 6 cut(s) | 143, 372, 558, 725, 1529, 1623 |
| HpySE526I | ACGT | 1 cut(s) | 261 |
| HspAI | GCGC | 1 cut(s) | 1248 |
| LmnI | GCTCC | 1 cut(s) | 1424 |
| Lsp1109I | GCAGC | 7 cut(s) | 553, 785, 1100, 1439, 1552, 1555, 1574 |
| LweI | GCATC | 4 cut(s) | 614, 720, 1185, 1580 |
| MabI | ACCWGGT | 1 cut(s) | 1203 |
| MaeI | CTAG | 4 cut(s) | 204, 309, 524, 1029 |
| MaeII | ACGT | 1 cut(s) | 261 |
| MaeIII | GTNAC | 6 cut(s) | 245, 301, 455, 580, 671, 1588 |
| MboII | GAAGA | 7 cut(s) | 211, 421, 640, 1030, 1201, 1390, 1534 |
| MhlI | GDGCHC | 2 cut(s) | 222, 316 |
| MlsI | TGGCCA | 3 cut(s) | 1261, 1382, 1441 |
| MluCI | AATT | 4 cut(s) | 111, 597, 637, 1316 |
| MluNI | TGGCCA | 3 cut(s) | 1261, 1382, 1441 |
| MmeI | TCCRAC | 1 cut(s) | 739 |
| MnlI | CCTC | 9 cut(s) | 19, 69, 521, 624, 824, 904, 1014, 1341, 1441 |
| Mox20I | TGGCCA | 3 cut(s) | 1261, 1382, 1441 |
| Mph1103I | ATGCAT | 1 cut(s) | 952 |
| MroXI | GAANNNNTTC | 1 cut(s) | 914 |
| MscI | TGGCCA | 3 cut(s) | 1261, 1382, 1441 |
| MseI | TTAA | 2 cut(s) | 860, 1296 |
| MslI | CAYNNNNRTG | 3 cut(s) | 500, 614, 651 |
| Msp20I | TGGCCA | 3 cut(s) | 1261, 1382, 1441 |
| MspA1I | CMGCKG | 3 cut(s) | 480, 544, 1565 |
| MspI | CCGG | 6 cut(s) | 291, 342, 864, 998, 1110, 1125 |
| MspR9I | CCNGG | 9 cut(s) | 292, 343, 356, 998, 1110, 1205, 1379, 1412, 1510 |
| MvaI | CCWGG | 5 cut(s) | 356, 1205, 1379, 1412, 1510 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 395, 1379, 1539, 1568 |
| NciI | CCSGG | 4 cut(s) | 292, 343, 998, 1110 |
| NdeI | CATATG | 1 cut(s) | 1357 |
| NlaIV | GGNNCC | 2 cut(s) | 340, 1075 |
| NmuCI | GTSAC | 3 cut(s) | 245, 301, 671 |
| NsiI | ATGCAT | 1 cut(s) | 952 |
| NspI | RCATGY | 2 cut(s) | 211, 848 |
| PceI | AGGCCT | 1 cut(s) | 807 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 267 |
| PdmI | GAANNNNTTC | 1 cut(s) | 914 |
| PfeI | GAWTC | 3 cut(s) | 43, 1134, 1525 |
| PflFI | GACNNNGTC | 1 cut(s) | 473 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1257, 1411 |
| PinAI | ACCGGT | 1 cut(s) | 1124 |
| PkrI | GCNGC | 8 cut(s) | 482, 543, 775, 1090, 1429, 1564, 1567, 1570 |
| Psp6I | CCWGG | 5 cut(s) | 354, 1203, 1377, 1410, 1508 |
| PspEI | GGTNACC | 1 cut(s) | 1588 |
| PspFI | CCCAGC | 1 cut(s) | 1533 |
| PspGI | CCWGG | 5 cut(s) | 354, 1203, 1377, 1410, 1508 |
| PspN4I | GGNNCC | 2 cut(s) | 340, 1075 |
| PspPI | GGNCC | 4 cut(s) | 107, 339, 392, 839 |
| PstNI | CAGNNNCTG | 2 cut(s) | 395, 1568 |
| PsyI | GACNNNGTC | 1 cut(s) | 473 |
| PvuII | CAGCTG | 2 cut(s) | 544, 1565 |
| RsaI | GTAC | 5 cut(s) | 212, 280, 513, 1289, 1472 |
| RsaNI | GTAC | 5 cut(s) | 211, 279, 512, 1288, 1471 |
| RseI | CAYNNNNRTG | 3 cut(s) | 500, 614, 651 |
| SaqAI | TTAA | 2 cut(s) | 860, 1296 |
| SatI | GCNGC | 8 cut(s) | 481, 542, 774, 1089, 1428, 1563, 1566, 1569 |
| Sau96I | GGNCC | 4 cut(s) | 107, 339, 392, 839 |
| ScrFI | CCNGG | 9 cut(s) | 292, 343, 356, 998, 1110, 1205, 1379, 1412, 1510 |
| SduI | GDGCHC | 2 cut(s) | 222, 316 |
| SexAI | ACCWGGT | 1 cut(s) | 1203 |
| SfaNI | GCATC | 4 cut(s) | 614, 720, 1185, 1580 |
| SfcI | CTRYAG | 1 cut(s) | 870 |
| SinI | GGWCC | 3 cut(s) | 107, 339, 839 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 500, 614, 651 |
| Sse9I | AATT | 4 cut(s) | 111, 597, 637, 1316 |
| SseBI | AGGCCT | 1 cut(s) | 807 |
| SsiI | CCGC | 5 cut(s) | 480, 623, 1071, 1311, 1371 |
| SspMI | CTAG | 4 cut(s) | 204, 309, 524, 1029 |
| StuI | AGGCCT | 1 cut(s) | 807 |
| StyD4I | CCNGG | 9 cut(s) | 290, 341, 354, 996, 1108, 1203, 1377, 1410, 1508 |
| StyI | CCWWGG | 1 cut(s) | 808 |
| TaaI | ACNGT | 6 cut(s) | 245, 455, 874, 961, 1257, 1450 |
| TaiI | ACGT | 1 cut(s) | 264 |
| TaqI | TCGA | 2 cut(s) | 237, 635 |
| TasI | AATT | 4 cut(s) | 111, 597, 637, 1316 |
| TatI | WGTACW | 2 cut(s) | 210, 1470 |
| TauI | GCSGC | 1 cut(s) | 483 |
| TfiI | GAWTC | 3 cut(s) | 43, 1134, 1525 |
| Tru1I | TTAA | 2 cut(s) | 860, 1296 |
| Tru9I | TTAA | 2 cut(s) | 860, 1296 |
| TscAI | CASTG | 4 cut(s) | 45, 990, 1449, 1627 |
| TseFI | GTSAC | 3 cut(s) | 245, 301, 671 |
| TseI | GCWGC | 7 cut(s) | 541, 773, 1088, 1427, 1562, 1565, 1568 |
| Tsp45I | GTSAC | 3 cut(s) | 245, 301, 671 |
| TspDTI | ATGAA | 8 cut(s) | 35, 409, 734, 786, 1031, 1155, 1264, 1535 |
| TspGWI | ACGGA | 2 cut(s) | 1066, 1293 |
| TspRI | CASTG | 4 cut(s) | 45, 990, 1449, 1627 |
| Tth111I | GACNNNGTC | 1 cut(s) | 473 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1257, 1411 |
| VneI | GTGCAC | 1 cut(s) | 312 |
| VpaK11BI | GGWCC | 3 cut(s) | 107, 339, 839 |
| XceI | RCATGY | 2 cut(s) | 211, 848 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 616, 1582 |
| XmiI | GTMKAC | 1 cut(s) | 1452 |
| XmnI | GAANNNNTTC | 1 cut(s) | 914 |
| XspI | CTAG | 4 cut(s) | 204, 309, 524, 1029 |
| Zsp2I | ATGCAT | 1 cut(s) | 952 |