pycom17g12010

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0014132
Physical Location & Seq
Reverse (-)
9790109 .. 9791338
1230 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1068 bp
ATGATGCTTTTGGTGAAAATATTTTTGGAAACAATCCTTAATAAAAATATTACACTTAAAGTGCTTTTAGAACCCAAAAATATTTTCTCTAAAAGTGCTTTCAATCATTTAAAAAACACAACCAAACGAGCCCATAGATTTCCAAAACAACTAGGTGGTATATGCTTACCTAATCAGCCTGTGCTCTTTACTGAAGAGGTGCCATGGTTGATTGGCACTCCAGCTGCAAGAAAAGGAAGATTCAAATTTTGGACTAGAACCCTAGAACGATCGAAAACGCTTCAACAGATCCTTGTAAATTCTTTCCCAAATGAATATTCCATCAATGATGAACAACAACTTCTCGGTGATCAATTGGTTAAGAGCACCAAAACCCAACAACCACTTGTTTTCCCAATTGGTCCTTTAAGCAAGCACACAACCACCAAGAACCCTAGCTTTTGGGAAGAAGACACAAGCTGCTTAAACTGGCTAGACAAGCAAAACCCTAACACAGTTGTTTACATCTCTTTTGGAAGTTGGGTTAGTCCAATCGGAGAGGGTAAGGTGAGAAGCTTGGCCTTGGCACTTGAAGCTTTGAGAAAGCCATTCCTTTGGGTGCTTGGATCTTCATGGCTTGGAGGGTTACCAATTGGGTACTTGGAAAGAGTAGCAAAACAAGGCAGAGTTGTATCATGGGCACCACAAATGGATGTCTTGCAACACAAGGCAGTGGGATGCTATCTCACACACTGTGGGTGGAATTCAACAATGGAGGCCATTCAATGCCAAAAGCCTCTCCTGTGCTATCCAGTGGCTGGGGACCAATTTGTAAATTGTTCATACATTGTGAACGTGTGGAGGATCGGGGTGAAACTAAGTGGGTTTGGACAGAGAGATGTTGAGGAAGGATTGAGAAGGGTGATGGAGGAGGATGAGATGAGCAACAGGATGAGGAGGCTAAATGAAAGGAGTATGGGAGATGACGCTAATTTGAGAGTTGTGTCCAATCTCACCGCTTTCACTGATCAGTTTAAGGTGTTAGCACTTGAGTATTCCAATAATGGTGTTTATGACTATGATTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

356

Amino Acids

40.5

Weight (kDa)

9.14

Isoelectric Point (pI)

42.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 163 - 309 1.5e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014132)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22250
fragaria_vesca FvH4_6g39710
malus_domestica MD09G1137500.v1.1 MD17G1127800.v1.1
prunus_persica Prupe.3G187400_v2.0.a1
pyrus_communis pycom17g12010
rosa_chinensis RchiOBHm_Chr2g0153791
rosa_laevigata RLG00000020724
rosa_multiflora Rmu_sc0011717.1_g000002 Rmu_sc0038427.1_g000001
rosa_roxburghii Rroxscaffold_2G00094750
rosa_rugosa Rorug02G0441800.1
rosa_samantha Rh2AG505800 Rh2BG515400 Rh2CG491300 Rh2DG527800
rosa_wichuraiana Rw2G041500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 199, 679
AccB7I CCANNNNNTGG 1 cut(s) 797
AciI CCGC 1 cut(s) 996
AclWI GGATC 3 cut(s) 283, 613, 851
AcsI RAATTY 3 cut(s) 245, 298, 742
AcuI CTGAAG 1 cut(s) 213
AdeI CACNNNGTG 1 cut(s) 734
AfaI GTAC 1 cut(s) 638
AfiI CCNNNNNNNGG 1 cut(s) 797
AflIII ACRYGT 1 cut(s) 834
AgsI TTSAA 6 cut(s) 103, 244, 284, 572, 747, 764
AjuI GAANNNNNNNTTGG 6 cut(s) 8, 40, 68, 100, 301, 333
AluBI AGCT 5 cut(s) 224, 438, 459, 555, 575
AluI AGCT 5 cut(s) 224, 438, 459, 555, 575
Alw21I GWGCWC 2 cut(s) 186, 368
AlwI GGATC 3 cut(s) 283, 613, 851
AlwNI CAGNNNCTG 1 cut(s) 797
AoxI GGCC 2 cut(s) 558, 756
ApeKI GCWGC 2 cut(s) 224, 459
ApoI RAATTY 3 cut(s) 245, 298, 742
AspS9I GGNCC 2 cut(s) 401, 802
AsuHPI GGTGA 6 cut(s) 25, 359, 559, 862, 913, 985
AvaII GGWCC 2 cut(s) 401, 802
BaeGI GKGCMC 1 cut(s) 682
BanI GGYRCC 2 cut(s) 199, 679
BanII GRGCYC 1 cut(s) 133
BbsI GAAGAC 1 cut(s) 456
Bbv12I GWGCWC 2 cut(s) 186, 368
BbvI GCAGC 2 cut(s) 211, 446
BccI CCATC 2 cut(s) 329, 898
BclI TGATCA 2 cut(s) 349, 1006
BfaI CTAG 6 cut(s) 152, 255, 263, 435, 473, 1066
BisI GCNGC 2 cut(s) 225, 460
BlsI GCNGC 2 cut(s) 226, 461
Bme18I GGWCC 2 cut(s) 401, 802
BmgT120I GGNCC 2 cut(s) 401, 802
BmiI GGNNCC 3 cut(s) 201, 681, 803
BmsI GCATC 1 cut(s) 707
BpiI GAAGAC 1 cut(s) 456
BpmI CTGGAG 1 cut(s) 204
BpuEI CTTGAG 1 cut(s) 1049
BsaJI CCNNGG 2 cut(s) 203, 561
Bsc4I CCNNNNNNNGG 1 cut(s) 797
Bse1I ACTGG 2 cut(s) 473, 791
BseDI CCNNGG 2 cut(s) 203, 561
BseGI GGATG 4 cut(s) 697, 722, 919, 936
BseLI CCNNNNNNNGG 1 cut(s) 797
BseNI ACTGG 2 cut(s) 473, 791
BseRI GAGGAG 2 cut(s) 923, 949
BseSI GKGCMC 1 cut(s) 682
BseXI GCAGC 2 cut(s) 211, 446
BseYI CCCAGC 1 cut(s) 797
Bsh1285I CGRYCG 1 cut(s) 272
BshFI GGCC 2 cut(s) 560, 758
BshNI GGYRCC 2 cut(s) 199, 679
BsiEI CGRYCG 1 cut(s) 272
BsiHKAI GWGCWC 2 cut(s) 186, 368
BslFI GGGAC 1 cut(s) 815
BslI CCNNNNNNNGG 1 cut(s) 797
BsmFI GGGAC 1 cut(s) 815
BsnI GGCC 2 cut(s) 560, 758
Bsp1286I GDGCHC 4 cut(s) 133, 186, 368, 682
Bsp143I GATC 6 cut(s) 269, 288, 349, 605, 843, 1006
Bsp19I CCATGG 1 cut(s) 203
BspACI CCGC 1 cut(s) 996
BspANI GGCC 2 cut(s) 560, 758
BspLI GGNNCC 3 cut(s) 201, 681, 803
BspPI GGATC 3 cut(s) 283, 613, 851
BspT107I GGYRCC 2 cut(s) 199, 679
BsrI ACTGG 2 cut(s) 473, 791
BssECI CCNNGG 2 cut(s) 203, 561
BssMI GATC 6 cut(s) 269, 288, 349, 605, 843, 1006
BssT1I CCWWGG 2 cut(s) 203, 561
Bst4CI ACNGT 2 cut(s) 496, 734
Bst6I CTCTTC 1 cut(s) 189
BstC8I GCNNGC 1 cut(s) 413
BstDEI CTNAG 1 cut(s) 857
BstDSI CCRYGG 1 cut(s) 203
BstEII GGTNACC 1 cut(s) 624
BstF5I GGATG 4 cut(s) 697, 722, 919, 936
BstKTI GATC 6 cut(s) 272, 291, 352, 608, 846, 1009
BstMBI GATC 6 cut(s) 269, 288, 349, 605, 843, 1006
BstMCI CGRYCG 1 cut(s) 272
BstMWI GCNNNNNNNGC 2 cut(s) 478, 572
BstPI GGTNACC 1 cut(s) 624
BstSLI GKGCMC 1 cut(s) 682
BstV1I GCAGC 2 cut(s) 211, 446
BstV2I GAAGAC 1 cut(s) 456
BstX2I RGATCY 2 cut(s) 288, 605
BstXI CCANNNNNNTGG 1 cut(s) 594
BstYI RGATCY 2 cut(s) 288, 605
BsuRI GGCC 2 cut(s) 560, 758
BtgI CCRYGG 1 cut(s) 203
BtsCI GGATG 4 cut(s) 697, 722, 919, 936
BtsI GCAGTG 1 cut(s) 717
BtsIMutI CAGTG 4 cut(s) 717, 730, 798, 1002
Cac8I GCNNGC 1 cut(s) 413
CaiI CAGNNNCTG 1 cut(s) 797
Cfr13I GGNCC 2 cut(s) 401, 802
CseI GACGC 1 cut(s) 974
Csp6I GTAC 1 cut(s) 637
CviAII CATG 3 cut(s) 204, 612, 675
CviQI GTAC 1 cut(s) 637
DdeI CTNAG 1 cut(s) 857
DpnI GATC 6 cut(s) 271, 290, 351, 607, 845, 1008
DpnII GATC 6 cut(s) 269, 288, 349, 605, 843, 1006
DraI TTTAAA 1 cut(s) 111
DraIII CACNNNGTG 1 cut(s) 734
Eam1104I CTCTTC 1 cut(s) 189
EarI CTCTTC 1 cut(s) 189
Eco130I CCWWGG 2 cut(s) 203, 561
Eco24I GRGCYC 1 cut(s) 133
Eco47I GGWCC 2 cut(s) 401, 802
Eco57I CTGAAG 1 cut(s) 213
Eco91I GGTNACC 1 cut(s) 624
EcoO65I GGTNACC 1 cut(s) 624
EcoRI GAATTC 1 cut(s) 742
EcoT14I CCWWGG 2 cut(s) 203, 561
EcoT38I GRGCYC 1 cut(s) 133
ErhI CCWWGG 2 cut(s) 203, 561
FaeI CATG 3 cut(s) 207, 615, 678
FaqI GGGAC 1 cut(s) 815
FatI CATG 3 cut(s) 203, 611, 674
FbaI TGATCA 2 cut(s) 349, 1006
Fnu4HI GCNGC 2 cut(s) 225, 460
FokI GGATG 4 cut(s) 704, 729, 926, 943
FriOI GRGCYC 1 cut(s) 133
Fsp4HI GCNGC 2 cut(s) 225, 460
FspBI CTAG 6 cut(s) 152, 255, 263, 435, 473, 1066
GluI GCNGC 2 cut(s) 225, 460
GsaI CCCAGC 1 cut(s) 801
GsuI CTGGAG 1 cut(s) 204
HaeIII GGCC 2 cut(s) 560, 758
HgaI GACGC 1 cut(s) 974
Hin1II CATG 3 cut(s) 207, 615, 678
HindIII AAGCTT 2 cut(s) 553, 573
HinfI GANTC 1 cut(s) 240
HphI GGTGA 6 cut(s) 25, 359, 559, 862, 913, 985
Hpy166II GTNNAC 2 cut(s) 502, 832
Hpy188I TCNGA 1 cut(s) 536
Hpy8I GTNNAC 2 cut(s) 502, 832
HpyAV CCTTC 2 cut(s) 881, 891
HpyCH4III ACNGT 2 cut(s) 496, 734
HpyCH4IV ACGT 1 cut(s) 834
HpyCH4V TGCA 2 cut(s) 227, 700
HpyF10VI GCNNNNNNNGC 2 cut(s) 478, 572
HpyF3I CTNAG 1 cut(s) 857
HpySE526I ACGT 1 cut(s) 834
Hsp92II CATG 3 cut(s) 207, 615, 678
Ksp22I TGATCA 2 cut(s) 349, 1006
Kzo9I GATC 6 cut(s) 269, 288, 349, 605, 843, 1006
LpnPI CCDG 7 cut(s) 192, 234, 454, 783, 794, 804, 913
Lsp1109I GCAGC 2 cut(s) 211, 446
LweI GCATC 1 cut(s) 707
MaeI CTAG 6 cut(s) 152, 255, 263, 435, 473, 1066
MaeII ACGT 1 cut(s) 834
MaeIII GTNAC 1 cut(s) 624
MalI GATC 6 cut(s) 271, 290, 351, 607, 845, 1008
MboI GATC 6 cut(s) 269, 288, 349, 605, 843, 1006
MboII GAAGA 5 cut(s) 206, 249, 458, 461, 600
MfeI CAATTG 3 cut(s) 353, 396, 630
MflI RGATCY 2 cut(s) 288, 605
MhlI GDGCHC 4 cut(s) 133, 186, 368, 682
MluCI AATT 9 cut(s) 245, 298, 353, 396, 630, 742, 806, 814, 970
MseI TTAA 7 cut(s) 39, 57, 110, 360, 407, 464, 1014
MspA1I CMGCKG 1 cut(s) 224
MunI CAATTG 3 cut(s) 353, 396, 630
MwoI GCNNNNNNNGC 2 cut(s) 478, 572
NcoI CCATGG 1 cut(s) 203
NdeII GATC 6 cut(s) 269, 288, 349, 605, 843, 1006
NlaIII CATG 3 cut(s) 207, 615, 678
NlaIV GGNNCC 3 cut(s) 201, 681, 803
PfeI GAWTC 1 cut(s) 240
PflMI CCANNNNNTGG 1 cut(s) 797
PkrI GCNGC 2 cut(s) 226, 461
Ple19I CGATCG 1 cut(s) 272
PspEI GGTNACC 1 cut(s) 624
PspFI CCCAGC 1 cut(s) 797
PspN4I GGNNCC 3 cut(s) 201, 681, 803
PspPI GGNCC 2 cut(s) 401, 802
PstNI CAGNNNCTG 1 cut(s) 797
PsuI RGATCY 2 cut(s) 288, 605
PvuI CGATCG 1 cut(s) 272
PvuII CAGCTG 1 cut(s) 224
RsaI GTAC 1 cut(s) 638
RsaNI GTAC 1 cut(s) 637
SaqAI TTAA 7 cut(s) 39, 57, 110, 360, 407, 464, 1014
SatI GCNGC 2 cut(s) 225, 460
Sau3AI GATC 6 cut(s) 269, 288, 349, 605, 843, 1006
Sau96I GGNCC 2 cut(s) 401, 802
SduI GDGCHC 4 cut(s) 133, 186, 368, 682
SfaNI GCATC 1 cut(s) 707
SinI GGWCC 2 cut(s) 401, 802
SmlI CTYRAG 1 cut(s) 1028
SmoI CTYRAG 1 cut(s) 1028
Sse9I AATT 9 cut(s) 245, 298, 353, 396, 630, 742, 806, 814, 970
SsiI CCGC 1 cut(s) 996
SspI AATATT 4 cut(s) 21, 49, 82, 317
SspMI CTAG 6 cut(s) 152, 255, 263, 435, 473, 1066
StyI CCWWGG 2 cut(s) 203, 561
TaaI ACNGT 2 cut(s) 496, 734
TaiI ACGT 1 cut(s) 837
TaqI TCGA 1 cut(s) 272
TasI AATT 9 cut(s) 245, 298, 353, 396, 630, 742, 806, 814, 970
TfiI GAWTC 1 cut(s) 240
Tru1I TTAA 7 cut(s) 39, 57, 110, 360, 407, 464, 1014
Tru9I TTAA 7 cut(s) 39, 57, 110, 360, 407, 464, 1014
TscAI CASTG 4 cut(s) 717, 737, 798, 1009
TseI GCWGC 2 cut(s) 224, 459
TspDTI ATGAA 5 cut(s) 327, 345, 600, 810, 960
TspRI CASTG 4 cut(s) 717, 737, 798, 1009
Van91I CCANNNNNTGG 1 cut(s) 797
VpaK11BI GGWCC 2 cut(s) 401, 802
XapI RAATTY 3 cut(s) 245, 298, 742
XspI CTAG 6 cut(s) 152, 255, 263, 435, 473, 1066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.