Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0014132

Physical Location & Seq

Genomic Coordinates Reverse (-)

16126308 .. 16134874

Gene Structure 8567 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00094750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGGGGAATATGAAGTGCATAAAGAGGAGGTCCAAAACCATCATCCTGGTTCCATATCCAGCTCAGGGACATGTAACTCCCATGCTCAAGTTAGCCTCCGCCTTCCTCAGCCATGGCTTTGATCCGGTGCTGGTCATGCCGGACTACATTCACCGCCAGATTGTCCCGAAGATCGAATCCAAAGACAAGATTCAATGCATACCAATCCCGGACGGGTTGGACAAGGACGCCCCGAGGGACTTCTTCACCATCGAGAAGGCCATGGAAAACAACATGCCTGTTCATTTAGAGAAACTTGTTCATCAACTGGATGAAGATGGAGGTGTTGTGTGCATAGTCATTGATTTGCTTGCGTCGTGGGCTATAGAAGTAGCCAACCGGTGTGGGGTCCCTGCGGCCGGGTTCTGGCCGGCCATGCTGGCCACGTACCGGTTGATCGGAGCCATTCCGGAGATGATCAGGACAGGTCTCATCTCTGATGCAGGGTTTCCAAGGCAATTAGGTGGTACATGCTTCTTACCTAATCAACCCATGCTGTCCAGTGAAGAGCTACCATGGTTGATTGGTACTCCAGCTGCAAGAAAAGCAAGATTCAAATTTTGGACTAGAACCCTGGACAGATCAAGATCTCTCCAATTGCTCCTTGTGAATTCATTCCCAAATGAATGTTGCTTGGATGATAAGCAATCACAACATCAACAACTAGATCTTCATCAACTGGTCCAAACCACCACCCAAACCCAACAACGAGTTTACCCAATTGGTCCCTTGAGCAAGCTCACAACCACCAAAAATCCTAGCTTTTGGGAAGAAGACACAAACTGCTTAAGCTGGCTAGACAAGCAGAAGCCGAACACTGTAATTTACATCTCTTTTGGGAGTTGGGTTAGTCCCATTGGAGAAGCTAAGGTCAAAGGATTGGCATTAGCACTTGAAGCCTTGGGGAAGCCATTCATTTGGGTGTTGGGGTCTTCATGGCGTGAAGGATTACCAATTGGGTACTTAGAAAAAGTGTCAAACATAGGCAAAGTTGTGTCTTGGGCACCACAAATGGAGATCTTGAAGCACAAAGCTATCGGATGTTATCTAACACATTGTGGGTGGAATTCAACGATGGAGGCCATCCAGTGCCAAAAGAGACTCTTGTGTTATCCTGTGGCTGGTGACCAGTTTGTGAATTGTGGCTACATTGTAAATTTGTGGAGGATTGGGGTGAGATTATGTGGGTTTGGAGAGAAGGATGTTGAAGAAGGATTGAAGAGGGTGATGGAGGAGGATGAGATGGGAAATAGGTTGAGGAAGTTATATGAGAGGACTATGGGAGATGAGGCTAATTCTAGGGCTGAGTCAAAACTCACCGACTTCATTGATCAGCTTAAGATGTTAACACTTGGGTCTTCTAATGGTGTCTATGATTATGATTTTATGAATGGAAGCTATAGCAATGCAAGTGCGAGCTCAAGCTCGAGTTTGAATAGCAGCTCTCAGGATACCGAGGATGACCTGACCATTGCAACTGTCTTGGCAGAAGAGGAAAAGCAGAAAAGTGATGGCAGGCTGGGGAAAAGACTCTCCCACTTGGATTCGATTCCGCACACTCCCAGGGTGAATGGGGAGATACCTGACGTGAATGATGCTACTCAAGACCATAAGAGGCTTTCAGAAAGGCTGGCTACCTATGATCTATCTGAGCTGCAAATTGAGGGTGATGGAAATTGCCAGTTTCGAGCAATAGCTGATCAGTTGTTTCGCAATCCGGATTACCATAAGCATGTTAGAAAGCAGGTTATAAAGCAGTTAAAGCATCACAGAAAACTCTATGAAGCTTATGTCCCAATGAAATACAAAAGTTACCTGAGGAAGATGAAAAAAAAAGGGGAGTGGGGAGACCATCTGACCCTACAGGCAGCTGCTGACCGATTTGGAGCCAAAATTTGTTTAATCACCTCTTTTCGGGATACTTGCTACATTGAGATCCTTCCTAAAGACGGGAATCCTACCCGAGAGCTTTGGCTGAGCTTTTGGAGTGAAGTGCATTACAACTCACTATATGCTACTGCAGATGTTCCCACAAGAAGTCCCAGAAAGAAGCATTGGCTTTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

701

Amino Acids

79.48

Weight (kDa)

8.29

Isoelectric Point (pI)

40.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	285 - 426	3.9e-19	UDP-glucoronosyl and UDP-glucosyl transferase
OTU	PF02338	569 - 658	3.9e-13	OTU-like cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22250
fragaria_vesca	FvH4_6g39710
malus_domestica	MD09G1137500.v1.1 MD17G1127800.v1.1
prunus_persica	Prupe.3G187400_v2.0.a1
pyrus_communis	pycom17g12010
rosa_chinensis	RchiOBHm_Chr2g0153791
rosa_laevigata	RLG00000020724
rosa_multiflora	Rmu_sc0011717.1_g000002 Rmu_sc0038427.1_g000001
rosa_roxburghii	Rroxscaffold_2G00094750
rosa_rugosa	Rorug02G0441800.1
rosa_samantha	Rh2AG505800 Rh2BG515400 Rh2CG491300 Rh2DG527800
rosa_wichuraiana	Rw2G041500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1790
Acc36I	ACCTGC	1 cut(s)	1774
AccB1I	GGYRCC	1 cut(s)	1042
AccIII	TCCGGA	2 cut(s)	448, 1756
AciI	CCGC	4 cut(s)	99, 154, 395, 1592
AclWI	GGATC	2 cut(s)	116, 1969
AcoI	YGGCCR	4 cut(s)	396, 407, 411, 420
AcsI	RAATTY	5 cut(s)	596, 649, 1105, 1195, 1932
AcyI	GRCGYC	1 cut(s)	228
AdeI	CACNNNGTG	1 cut(s)	1097
AfaI	GTAC	4 cut(s)	428, 508, 568, 1001
AfiI	CCNNNNNNNGG	8 cut(s)	65, 385, 398, 405, 429, 1160, 1953, 1988
AflII	CTTAAG	2 cut(s)	826, 1376
AflIII	ACRYGT	1 cut(s)	70
AgeI	ACCGGT	2 cut(s)	378, 429
AgsI	TTSAA	8 cut(s)	194, 595, 935, 1063, 1110, 1247, 1258, 1474
AjiI	CACGTC	1 cut(s)	1627
AjnI	CCWGG	3 cut(s)	45, 612, 1601
AjuI	GAANNNNNNNTTGG	1 cut(s)	2077
Alw21I	GWGCWC	1 cut(s)	1460
Alw26I	GTCTC	3 cut(s)	473, 1132, 1881
AlwI	GGATC	2 cut(s)	116, 1969
AlwNI	CAGNNNCTG	1 cut(s)	1913
Ama87I	CYCGRG	3 cut(s)	232, 1465, 2001
Aor13HI	TCCGGA	2 cut(s)	448, 1756
AoxI	GGCC	6 cut(s)	258, 396, 407, 411, 420, 1119
ApeKI	GCWGC	5 cut(s)	575, 1479, 1693, 1907, 1910
ApoI	RAATTY	5 cut(s)	596, 649, 1105, 1195, 1932
AsiGI	ACCGGT	2 cut(s)	378, 429
Asp700I	GAANNNNTTC	2 cut(s)	653, 950
AspS9I	GGNCC	4 cut(s)	30, 388, 721, 764
AsuC2I	CCSGG	2 cut(s)	209, 400
AsuHPI	GGTGA	9 cut(s)	143, 238, 1175, 1225, 1276, 1348, 1618, 1718, 1936
AvaI	CYCGRG	3 cut(s)	232, 1465, 2001
AvaII	GGWCC	4 cut(s)	30, 388, 721, 764
AxyI	CCTNAGG	1 cut(s)	1856
BaeGI	GKGCMC	1 cut(s)	1045
BalI	TGGCCA	1 cut(s)	422
BanI	GGYRCC	1 cut(s)	1042
BanII	GRGCYC	1 cut(s)	1460
BbsI	GAAGAC	3 cut(s)	819, 963, 1389
Bbv12I	GWGCWC	1 cut(s)	1460
BbvCI	CCTCAGC	1 cut(s)	107
BbvI	GCAGC	5 cut(s)	562, 1491, 1680, 1897, 1919
BciT130I	CCWGG	3 cut(s)	47, 614, 1603
BciVI	GTATCC	2 cut(s)	1483, 1951
BclI	TGATCA	3 cut(s)	456, 1369, 1738
BcnI	CCSGG	2 cut(s)	209, 400
BcoDI	GTCTC	3 cut(s)	473, 1132, 1881
BfaI	CTAG	6 cut(s)	606, 704, 798, 836, 1338, 2104
BfmI	CTRYAG	4 cut(s)	363, 1438, 1901, 2058
BfrI	CTTAAG	2 cut(s)	826, 1376
BfuAI	ACCTGC	1 cut(s)	1774
BfuI	GTATCC	2 cut(s)	1483, 1951
BglI	GCCNNNNNGGC	1 cut(s)	419
BglII	AGATCT	3 cut(s)	626, 706, 1056
BisI	GCNGC	6 cut(s)	396, 576, 1480, 1694, 1908, 1911
BlpI	GCTNAGC	1 cut(s)	2015
BlsI	GCNGC	6 cut(s)	397, 577, 1481, 1695, 1909, 1912
Bme1390I	CCNGG	5 cut(s)	47, 209, 400, 614, 1603
Bme18I	GGWCC	4 cut(s)	30, 388, 721, 764
BmeT110I	CYCGRG	3 cut(s)	232, 1465, 2001
BmgBI	CACGTC	1 cut(s)	1627
BmgT120I	GGNCC	4 cut(s)	30, 388, 721, 764
BmiI	GGNNCC	7 cut(s)	51, 389, 390, 442, 766, 1044, 1927
BmrFI	CCNGG	5 cut(s)	47, 209, 400, 614, 1603
BmsI	GCATC	3 cut(s)	469, 1624, 1813
BpiI	GAAGAC	3 cut(s)	819, 963, 1389
BpmI	CTGGAG	1 cut(s)	555
Bpu10I	CCTNAGC	3 cut(s)	63, 107, 906
Bpu1102I	GCTNAGC	1 cut(s)	2015
BpuEI	CTTGAG	4 cut(s)	71, 790, 1444, 1626
BpuMI	CCSGG	2 cut(s)	209, 400
BsaAI	YACGTR	1 cut(s)	426
BsaBI	GATNNNNATC	2 cut(s)	625, 711
BsaHI	GRCGYC	1 cut(s)	228
BsaI	GGTCTC	2 cut(s)	473, 1881
BsaWI	WCCGGW	5 cut(s)	124, 378, 429, 448, 1756
BsaXI	ACNNNNNCTCC	2 cut(s)	312, 342
Bsc4I	CCNNNNNNNGG	8 cut(s)	65, 385, 398, 405, 429, 1160, 1953, 1988
Bse118I	RCCGGY	3 cut(s)	378, 409, 429
Bse1I	ACTGG	6 cut(s)	312, 540, 723, 1126, 1168, 1720
Bse21I	CCTNAGG	1 cut(s)	1856
Bse3DI	GCAATG	2 cut(s)	1450, 1509
Bse8I	GATNNNNATC	2 cut(s)	625, 711
BseAI	TCCGGA	2 cut(s)	448, 1756
BseBI	CCWGG	3 cut(s)	47, 614, 1603
BseGI	GGATG	8 cut(s)	42, 316, 682, 1085, 1122, 1246, 1282, 1504
BseJI	GATNNNNATC	2 cut(s)	625, 711
BseLI	CCNNNNNNNGG	8 cut(s)	65, 385, 398, 405, 429, 1160, 1953, 1988
BseMI	GCAATG	2 cut(s)	1450, 1509
BseMII	CTCAG	7 cut(s)	77, 121, 1335, 1499, 1680, 1847, 2006
BseNI	ACTGG	6 cut(s)	312, 540, 723, 1126, 1168, 1720
BseRI	GAGGAG	2 cut(s)	40, 1286
BseSI	GKGCMC	1 cut(s)	1045
BseX3I	CGGCCG	1 cut(s)	396
BseXI	GCAGC	5 cut(s)	562, 1491, 1680, 1897, 1919
BseYI	CCCAGC	1 cut(s)	1558
Bsh1285I	CGRYCG	1 cut(s)	399
BshFI	GGCC	6 cut(s)	260, 398, 409, 413, 422, 1121
BshNI	GGYRCC	1 cut(s)	1042
BshTI	ACCGGT	2 cut(s)	378, 429
BsiEI	CGRYCG	1 cut(s)	399
BsiHKAI	GWGCWC	1 cut(s)	1460
BsiHKCI	CYCGRG	3 cut(s)	232, 1465, 2001
BsiSI	CCGG	9 cut(s)	125, 140, 209, 379, 399, 410, 430, 449, 1757
BslFI	GGGAC	8 cut(s)	81, 149, 251, 374, 750, 876, 1817, 2064
BslI	CCNNNNNNNGG	8 cut(s)	65, 385, 398, 405, 429, 1160, 1953, 1988
BsmAI	GTCTC	3 cut(s)	473, 1132, 1881
BsmFI	GGGAC	8 cut(s)	81, 149, 251, 374, 750, 876, 1817, 2064
BsnI	GGCC	6 cut(s)	260, 398, 409, 413, 422, 1121
Bso31I	GGTCTC	2 cut(s)	473, 1881
BsoBI	CYCGRG	3 cut(s)	232, 1465, 2001
Bsp1286I	GDGCHC	2 cut(s)	1045, 1460
Bsp13I	TCCGGA	2 cut(s)	448, 1756
Bsp1720I	GCTNAGC	1 cut(s)	2015
Bsp19I	CCATGG	3 cut(s)	112, 261, 554
BspACI	CCGC	4 cut(s)	99, 154, 395, 1592
BspANI	GGCC	6 cut(s)	260, 398, 409, 413, 422, 1121
BspCNI	CTCAG	7 cut(s)	76, 120, 1336, 1498, 1681, 1848, 2007
BspEI	TCCGGA	2 cut(s)	448, 1756
BspLI	GGNNCC	7 cut(s)	51, 389, 390, 442, 766, 1044, 1927
BspMAI	CTGCAG	1 cut(s)	2062
BspMI	ACCTGC	1 cut(s)	1774
BspPI	GGATC	2 cut(s)	116, 1969
BspQI	GCTCTTC	1 cut(s)	540
BspT107I	GGYRCC	1 cut(s)	1042
BspTI	CTTAAG	2 cut(s)	826, 1376
BspTNI	GGTCTC	2 cut(s)	473, 1881
BsrDI	GCAATG	2 cut(s)	1450, 1509
BsrFI	RCCGGY	3 cut(s)	378, 409, 429
BsrI	ACTGG	6 cut(s)	312, 540, 723, 1126, 1168, 1720
BssAI	RCCGGY	3 cut(s)	378, 409, 429
BssNI	GRCGYC	1 cut(s)	228
BssT1I	CCWWGG	5 cut(s)	112, 261, 491, 554, 939
Bst2UI	CCWGG	3 cut(s)	47, 614, 1603
Bst4CI	ACNGT	2 cut(s)	859, 1519
Bst6I	CTCTTC	3 cut(s)	540, 1253, 1524
BstACI	GRCGYC	1 cut(s)	228
BstAFI	CTTAAG	2 cut(s)	826, 1376
BstBAI	YACGTR	1 cut(s)	426
BstC8I	GCNNGC	8 cut(s)	351, 411, 420, 776, 833, 1456, 1556, 1671
BstDEI	CTNAG	9 cut(s)	63, 107, 906, 1003, 1344, 1485, 1689, 1856, 2015
BstDSI	CCRYGG	3 cut(s)	112, 261, 554
BstEII	GGTNACC	1 cut(s)	1163
BstF5I	GGATG	8 cut(s)	42, 316, 682, 1085, 1122, 1246, 1282, 1504
BstMAI	GTCTC	3 cut(s)	473, 1132, 1881
BstMCI	CGRYCG	1 cut(s)	399
BstMWI	GCNNNNNNNGC	8 cut(s)	136, 359, 415, 419, 584, 841, 935, 1801
BstNI	CCWGG	3 cut(s)	47, 614, 1603
BstNSI	RCATGY	4 cut(s)	74, 277, 513, 1775
BstPI	GGTNACC	1 cut(s)	1163
BstSCI	CCNGG	5 cut(s)	45, 207, 398, 612, 1601
BstSFI	CTRYAG	4 cut(s)	363, 1438, 1901, 2058
BstSLI	GKGCMC	1 cut(s)	1045
BstV1I	GCAGC	5 cut(s)	562, 1491, 1680, 1897, 1919
BstV2I	GAAGAC	3 cut(s)	819, 963, 1389
BstX2I	RGATCY	4 cut(s)	626, 706, 1056, 1974
BstXI	CCANNNNNNTGG	2 cut(s)	46, 957
BstYI	RGATCY	4 cut(s)	626, 706, 1056, 1974
BstZI	CGGCCG	1 cut(s)	396
Bsu36I	CCTNAGG	1 cut(s)	1856
BsuI	GTATCC	2 cut(s)	1483, 1951
BsuRI	GGCC	6 cut(s)	260, 398, 409, 413, 422, 1121
BtgI	CCRYGG	3 cut(s)	112, 261, 554
BtrI	CACGTC	1 cut(s)	1627
BtsCI	GGATG	8 cut(s)	42, 316, 682, 1085, 1122, 1246, 1282, 1504
BtsIMutI	CAGTG	3 cut(s)	547, 855, 1133
BveI	ACCTGC	1 cut(s)	1774
Cac8I	GCNNGC	8 cut(s)	351, 411, 420, 776, 833, 1456, 1556, 1671
CaiI	CAGNNNCTG	1 cut(s)	1913
Cfr10I	RCCGGY	3 cut(s)	378, 409, 429
Cfr13I	GGNCC	4 cut(s)	30, 388, 721, 764
CseI	GACGC	2 cut(s)	236, 342
Csp6I	GTAC	4 cut(s)	427, 507, 567, 1000
CspAI	ACCGGT	2 cut(s)	378, 429
CspCI	CAANNNNNGTGG	2 cut(s)	364, 399
CviQI	GTAC	4 cut(s)	427, 507, 567, 1000
DdeI	CTNAG	9 cut(s)	63, 107, 906, 1003, 1344, 1485, 1689, 1856, 2015
DraIII	CACNNNGTG	1 cut(s)	1097
EaeI	YGGCCR	4 cut(s)	396, 407, 411, 420
EagI	CGGCCG	1 cut(s)	396
Eam1104I	CTCTTC	3 cut(s)	540, 1253, 1524
EarI	CTCTTC	3 cut(s)	540, 1253, 1524
EciI	GGCGGA	1 cut(s)	88
Ecl136II	GAGCTC	1 cut(s)	1458
EclXI	CGGCCG	1 cut(s)	396
Eco130I	CCWWGG	5 cut(s)	112, 261, 491, 554, 939
Eco24I	GRGCYC	1 cut(s)	1460
Eco31I	GGTCTC	2 cut(s)	473, 1881
Eco47I	GGWCC	4 cut(s)	30, 388, 721, 764
Eco52I	CGGCCG	1 cut(s)	396
Eco53kI	GAGCTC	1 cut(s)	1458
Eco81I	CCTNAGG	1 cut(s)	1856
Eco88I	CYCGRG	3 cut(s)	232, 1465, 2001
Eco91I	GGTNACC	1 cut(s)	1163
EcoICRI	GAGCTC	1 cut(s)	1458
EcoO109I	RGGNCCY	1 cut(s)	388
EcoO65I	GGTNACC	1 cut(s)	1163
EcoRI	GAATTC	2 cut(s)	649, 1105
EcoRII	CCWGG	3 cut(s)	45, 612, 1601
EcoT14I	CCWWGG	5 cut(s)	112, 261, 491, 554, 939
EcoT22I	ATGCAT	1 cut(s)	200
EcoT38I	GRGCYC	1 cut(s)	1460
ErhI	CCWWGG	5 cut(s)	112, 261, 491, 554, 939
FalI	AAGNNNNNCTT	2 cut(s)	1127, 1159
FaqI	GGGAC	8 cut(s)	81, 149, 251, 374, 750, 876, 1817, 2064
FbaI	TGATCA	3 cut(s)	456, 1369, 1738
Fnu4HI	GCNGC	6 cut(s)	396, 576, 1480, 1694, 1908, 1911
FokI	GGATG	8 cut(s)	29, 323, 689, 1092, 1109, 1253, 1289, 1511
FriOI	GRGCYC	1 cut(s)	1460
FseI	GGCCGGCC	1 cut(s)	413
Fsp4HI	GCNGC	6 cut(s)	396, 576, 1480, 1694, 1908, 1911
FspBI	CTAG	6 cut(s)	606, 704, 798, 836, 1338, 2104
GluI	GCNGC	6 cut(s)	396, 576, 1480, 1694, 1908, 1911
GsaI	CCCAGC	1 cut(s)	1562
GsuI	CTGGAG	1 cut(s)	555
HaeIII	GGCC	6 cut(s)	260, 398, 409, 413, 422, 1121
HapII	CCGG	9 cut(s)	125, 140, 209, 379, 399, 410, 430, 449, 1757
HgaI	GACGC	2 cut(s)	236, 342
Hin1I	GRCGYC	1 cut(s)	228
HincII	GTYRAC	1 cut(s)	1386
HindII	GTYRAC	1 cut(s)	1386
HindIII	AAGCTT	1 cut(s)	1824
HinfI	GANTC	9 cut(s)	176, 190, 591, 1140, 1346, 1569, 1583, 1588, 1993
HpaI	GTTAAC	1 cut(s)	1386
HpaII	CCGG	9 cut(s)	125, 140, 209, 379, 399, 410, 430, 449, 1757
HphI	GGTGA	9 cut(s)	143, 238, 1175, 1225, 1276, 1348, 1618, 1718, 1936
Hpy166II	GTNNAC	2 cut(s)	754, 1386
Hpy188I	TCNGA	6 cut(s)	440, 478, 1079, 1663, 1690, 1896
Hpy8I	GTNNAC	2 cut(s)	754, 1386
Hpy99I	CGWCG	1 cut(s)	358
HpyAV	CCTTC	6 cut(s)	112, 250, 977, 1231, 1244, 1988
HpyCH4III	ACNGT	2 cut(s)	859, 1519
HpyCH4IV	ACGT	2 cut(s)	425, 1626
HpyF10VI	GCNNNNNNNGC	8 cut(s)	136, 359, 415, 419, 584, 841, 935, 1801
HpyF3I	CTNAG	9 cut(s)	63, 107, 906, 1003, 1344, 1485, 1689, 1856, 2015
HpySE526I	ACGT	2 cut(s)	425, 1626
Hsp92I	GRCGYC	1 cut(s)	228
KflI	GGGWCCC	1 cut(s)	388
Kpn2I	TCCGGA	2 cut(s)	448, 1756
KroI	GCCGGC	1 cut(s)	409
KroNI	GCCGGC	1 cut(s)	411
Ksp22I	TGATCA	3 cut(s)	456, 1369, 1738
KspAI	GTTAAC	1 cut(s)	1386
LguI	GCTCTTC	1 cut(s)	540
LmnI	GCTCC	3 cut(s)	440, 645, 1925
Lsp1109I	GCAGC	5 cut(s)	562, 1491, 1680, 1897, 1919
LweI	GCATC	3 cut(s)	469, 1624, 1813
MaeI	CTAG	6 cut(s)	606, 704, 798, 836, 1338, 2104
MaeII	ACGT	2 cut(s)	425, 1626
MaeIII	GTNAC	3 cut(s)	73, 1163, 1850
MfeI	CAATTG	3 cut(s)	635, 759, 993
MflI	RGATCY	4 cut(s)	626, 706, 1056, 1974
MhlI	GDGCHC	2 cut(s)	1045, 1460
MlsI	TGGCCA	1 cut(s)	422
MluNI	TGGCCA	1 cut(s)	422
MlyI	GAGTC	3 cut(s)	1134, 1355, 1563
MmeI	TCCRAC	1 cut(s)	198
Mox20I	TGGCCA	1 cut(s)	422
Mph1103I	ATGCAT	1 cut(s)	200
MroI	TCCGGA	2 cut(s)	448, 1756
MroNI	GCCGGC	1 cut(s)	409
MroXI	GAANNNNTTC	2 cut(s)	653, 950
MscI	TGGCCA	1 cut(s)	422
MseI	TTAA	5 cut(s)	827, 1377, 1385, 1799, 1940
MslI	CAYNNNNRTG	2 cut(s)	959, 1770
Msp20I	TGGCCA	1 cut(s)	422
MspA1I	CMGCKG	2 cut(s)	575, 1910
MspCI	CTTAAG	2 cut(s)	826, 1376
MspI	CCGG	9 cut(s)	125, 140, 209, 379, 399, 410, 430, 449, 1757
MspR9I	CCNGG	5 cut(s)	47, 209, 400, 614, 1603
MunI	CAATTG	3 cut(s)	635, 759, 993
MvaI	CCWGG	3 cut(s)	47, 614, 1603
MwoI	GCNNNNNNNGC	8 cut(s)	136, 359, 415, 419, 584, 841, 935, 1801
NaeI	GCCGGC	1 cut(s)	411
NciI	CCSGG	2 cut(s)	209, 400
NcoI	CCATGG	3 cut(s)	112, 261, 554
NgoMIV	GCCGGC	1 cut(s)	409
NlaIV	GGNNCC	7 cut(s)	51, 389, 390, 442, 766, 1044, 1927
NmuCI	GTSAC	1 cut(s)	1163
NsiI	ATGCAT	1 cut(s)	200
NspI	RCATGY	4 cut(s)	74, 277, 513, 1775
PaeR7I	CTCGAG	1 cut(s)	1465
PasI	CCCWGGG	1 cut(s)	1602
PciI	ACATGT	1 cut(s)	70
PciSI	GCTCTTC	1 cut(s)	540
PdiI	GCCGGC	1 cut(s)	411
PdmI	GAANNNNTTC	2 cut(s)	653, 950
PfeI	GAWTC	6 cut(s)	176, 190, 591, 1583, 1588, 1993
PfoI	TCCNGGA	1 cut(s)	207
PinAI	ACCGGT	2 cut(s)	378, 429
PkrI	GCNGC	6 cut(s)	397, 577, 1481, 1695, 1909, 1912
PleI	GAGTC	3 cut(s)	1134, 1354, 1563
PpsI	GAGTC	3 cut(s)	1134, 1354, 1563
Ppu21I	YACGTR	1 cut(s)	426
PpuMI	RGGWCCY	1 cut(s)	388
PscI	ACATGT	1 cut(s)	70
PsiI	TTATAA	1 cut(s)	1790
Psp124BI	GAGCTC	1 cut(s)	1460
Psp5II	RGGWCCY	1 cut(s)	388
Psp6I	CCWGG	3 cut(s)	45, 612, 1601
PspEI	GGTNACC	1 cut(s)	1163
PspFI	CCCAGC	1 cut(s)	1558
PspGI	CCWGG	3 cut(s)	45, 612, 1601
PspN4I	GGNNCC	7 cut(s)	51, 389, 390, 442, 766, 1044, 1927
PspPI	GGNCC	4 cut(s)	30, 388, 721, 764
PspPPI	RGGWCCY	1 cut(s)	388
PspXI	VCTCGAGB	1 cut(s)	1465
PstI	CTGCAG	1 cut(s)	2062
PstNI	CAGNNNCTG	1 cut(s)	1913
PsuI	RGATCY	4 cut(s)	626, 706, 1056, 1974
PvuII	CAGCTG	2 cut(s)	575, 1910
RigI	GGCCGGCC	1 cut(s)	413
RsaI	GTAC	4 cut(s)	428, 508, 568, 1001
RsaNI	GTAC	4 cut(s)	427, 507, 567, 1000
RseI	CAYNNNNRTG	2 cut(s)	959, 1770
SacI	GAGCTC	1 cut(s)	1460
SapI	GCTCTTC	1 cut(s)	540
SaqAI	TTAA	5 cut(s)	827, 1377, 1385, 1799, 1940
SatI	GCNGC	6 cut(s)	396, 576, 1480, 1694, 1908, 1911
Sau96I	GGNCC	4 cut(s)	30, 388, 721, 764
SchI	GAGTC	3 cut(s)	1134, 1355, 1563
ScrFI	CCNGG	5 cut(s)	47, 209, 400, 614, 1603
SduI	GDGCHC	2 cut(s)	1045, 1460
SfaNI	GCATC	3 cut(s)	469, 1624, 1813
SfcI	CTRYAG	4 cut(s)	363, 1438, 1901, 2058
SfiI	GGCCNNNNNGGCC	1 cut(s)	419
Sfr274I	CTCGAG	1 cut(s)	1465
SinI	GGWCC	4 cut(s)	30, 388, 721, 764
SlaI	CTCGAG	1 cut(s)	1465
SmiMI	CAYNNNNRTG	2 cut(s)	959, 1770
SmlI	CTYRAG	7 cut(s)	86, 769, 826, 1376, 1459, 1465, 1641
SmoI	CTYRAG	7 cut(s)	86, 769, 826, 1376, 1459, 1465, 1641
SsiI	CCGC	4 cut(s)	99, 154, 395, 1592
SspMI	CTAG	6 cut(s)	606, 704, 798, 836, 1338, 2104
SstI	GAGCTC	1 cut(s)	1460
StyD4I	CCNGG	5 cut(s)	45, 207, 398, 612, 1601
StyI	CCWWGG	5 cut(s)	112, 261, 491, 554, 939
TaaI	ACNGT	2 cut(s)	859, 1519
TaiI	ACGT	2 cut(s)	428, 1629
TaqI	TCGA	5 cut(s)	174, 252, 1466, 1586, 1726
TaqII	GACCGA	1 cut(s)	1932
TauI	GCSGC	1 cut(s)	398
TfiI	GAWTC	6 cut(s)	176, 190, 591, 1583, 1588, 1993
Tru1I	TTAA	5 cut(s)	827, 1377, 1385, 1799, 1940
Tru9I	TTAA	5 cut(s)	827, 1377, 1385, 1799, 1940
TscAI	CASTG	3 cut(s)	547, 862, 1133
TseFI	GTSAC	1 cut(s)	1163
TseI	GCWGC	5 cut(s)	575, 1479, 1693, 1907, 1910
Tsp45I	GTSAC	1 cut(s)	1163
TspRI	CASTG	3 cut(s)	547, 862, 1133
Vha464I	CTTAAG	2 cut(s)	826, 1376
VpaK11BI	GGWCC	4 cut(s)	30, 388, 721, 764
XapI	RAATTY	5 cut(s)	596, 649, 1105, 1195, 1932
XceI	RCATGY	4 cut(s)	74, 277, 513, 1775
XhoI	CTCGAG	1 cut(s)	1465
XmnI	GAANNNNTTC	2 cut(s)	653, 950
XspI	CTAG	6 cut(s)	606, 704, 798, 836, 1338, 2104
Zsp2I	ATGCAT	1 cut(s)	200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.