pycom17g16770

Protein kinase domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
14780425 .. 14781304
880 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g16770.2

Sequence Viewer

Length: 645 bp
ATGCCATATCTCATAGGGCCTGCTGTATATAGAGTGTATCCCCAGAATGTTACTGGTAGATCAGCGGAACTCATCATAGAACGAACCATGTTCATCAAGGTTCGATTTCTCCTTTCAGAAACTCCATTTAGTTGTGGAGTTCCCGCTAGGAATTCATTACTCAGATATTCACCCCCTCAATCTGATCTTAGGATTTTTATCTGTTTCCCAGTTTTCTTCTCAACTTCATTCTTGAATTCTTTGAACCTTTCAAAGGATTCTGACTTTAGGAGAAACCTCCTCTCGACATATGGCACGCTCTCCTTTCCCAGTGAATGGAGATTTGGTCATCATCACAAAACTAGACATATTAATCGAAGATTTCATTTCATCCGAGACGCACTTCAAGATGGTGAGATTGATCTGTTATATTATAAGACTAAAGAACAGATAGCAGATATCTTCACCAAAGCTTTAGCAATGGATCAATTTGAATTTCTGAGGAAAGCTCTAGGAGCGAATTCAACACAACACTTAGAAGGGAGTAGTAAAACTCAGTTTAAATGGCAGCCCTTGGATCACAATCCAAGTGTGTATCTAAGATGTAATCTTAGAGTAAGTGATAGTTTATGCCTTGTGTCATTACCTTATAGGGTAAATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

215

Amino Acids

24.95

Weight (kDa)

9.46

Isoelectric Point (pI)

50.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024656)

Species Orthologous Gene IDs
pyrus_communis pycom08g03660 pycom17g16770
rosa_chinensis RchiOBHm_Chr2g0086181

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 414
AccB7I CCANNNNNTGG 1 cut(s) 315
AciI CCGC 2 cut(s) 65, 144
AclWI GGATC 2 cut(s) 471, 564
AcsI RAATTY 4 cut(s) 151, 235, 473, 499
AfiI CCNNNNNNNGG 2 cut(s) 253, 315
AgsI TTSAA 6 cut(s) 235, 244, 252, 386, 473, 504
AjuI GAANNNNNNNTTGG 2 cut(s) 306, 338
AluBI AGCT 2 cut(s) 452, 488
AluI AGCT 2 cut(s) 452, 488
Alw26I GTCTC 1 cut(s) 369
AlwI GGATC 2 cut(s) 471, 564
AoxI GGCC 1 cut(s) 17
ApeKI GCWGC 1 cut(s) 547
ApoI RAATTY 4 cut(s) 151, 235, 473, 499
AseI ATTAAT 1 cut(s) 351
AspS9I GGNCC 1 cut(s) 17
AsuHPI GGTGA 3 cut(s) 162, 404, 436
BbvI GCAGC 1 cut(s) 559
BccI CCATC 1 cut(s) 383
BciVI GTATCC 1 cut(s) 48
BcoDI GTCTC 1 cut(s) 369
BfaI CTAG 3 cut(s) 147, 342, 491
BfuI GTATCC 1 cut(s) 48
BisI GCNGC 1 cut(s) 548
BlsI GCNGC 1 cut(s) 549
BmgT120I GGNCC 1 cut(s) 17
BmrI ACTGGG 2 cut(s) 203, 303
BmuI ACTGGG 2 cut(s) 203, 303
BplI GAGNNNNNCTC 2 cut(s) 472, 504
BsaBI GATNNNNATC 2 cut(s) 197, 561
BsaJI CCNNGG 1 cut(s) 552
BsaXI ACNNNNNCTCC 2 cut(s) 310, 340
Bsc4I CCNNNNNNNGG 2 cut(s) 253, 315
Bse1I ACTGG 3 cut(s) 58, 209, 309
Bse3DI GCAATG 1 cut(s) 465
Bse8I GATNNNNATC 2 cut(s) 197, 561
BseDI CCNNGG 1 cut(s) 552
BseGI GGATG 1 cut(s) 369
BseJI GATNNNNATC 2 cut(s) 197, 561
BseLI CCNNNNNNNGG 2 cut(s) 253, 315
BseMI GCAATG 1 cut(s) 465
BseMII CTCAG 3 cut(s) 175, 470, 548
BseNI ACTGG 3 cut(s) 58, 209, 309
BseRI GAGGAG 1 cut(s) 269
BseXI GCAGC 1 cut(s) 559
BshFI GGCC 1 cut(s) 19
BslI CCNNNNNNNGG 2 cut(s) 253, 315
BsmAI GTCTC 1 cut(s) 369
BsmBI CGTCTC 1 cut(s) 369
BsnI GGCC 1 cut(s) 19
Bsp143I GATC 5 cut(s) 59, 184, 400, 463, 556
BspACI CCGC 2 cut(s) 65, 144
BspANI GGCC 1 cut(s) 19
BspCNI CTCAG 3 cut(s) 174, 471, 547
BspPI GGATC 2 cut(s) 471, 564
BsrDI GCAATG 1 cut(s) 465
BsrI ACTGG 3 cut(s) 58, 209, 309
BssECI CCNNGG 1 cut(s) 552
BssMI GATC 5 cut(s) 59, 184, 400, 463, 556
BssT1I CCWWGG 1 cut(s) 552
BstC8I GCNNGC 2 cut(s) 21, 296
BstDEI CTNAG 7 cut(s) 161, 188, 479, 514, 534, 578, 590
BstENI CCTNNNNNAGG 1 cut(s) 251
BstF5I GGATG 1 cut(s) 369
BstKTI GATC 5 cut(s) 62, 187, 403, 466, 559
BstMAI GTCTC 1 cut(s) 369
BstMBI GATC 5 cut(s) 59, 184, 400, 463, 556
BstMWI GCNNNNNNNGC 1 cut(s) 494
BstV1I GCAGC 1 cut(s) 559
BsuI GTATCC 1 cut(s) 48
BsuRI GGCC 1 cut(s) 19
BtsCI GGATG 1 cut(s) 369
BtsIMutI CAGTG 1 cut(s) 316
Cac8I GCNNGC 2 cut(s) 21, 296
Cfr13I GGNCC 1 cut(s) 17
CseI GACGC 1 cut(s) 386
CviAII CATG 1 cut(s) 88
CviJI RGCY 4 cut(s) 19, 452, 488, 550
CviKI_1 RGCY 4 cut(s) 19, 452, 488, 550
DdeI CTNAG 7 cut(s) 161, 188, 479, 514, 534, 578, 590
DpnI GATC 5 cut(s) 61, 186, 402, 465, 558
DpnII GATC 5 cut(s) 59, 184, 400, 463, 556
DraI TTTAAA 1 cut(s) 541
Eco130I CCWWGG 1 cut(s) 552
Eco32I GATATC 1 cut(s) 439
EcoNI CCTNNNNNAGG 1 cut(s) 251
EcoO109I RGGNCCY 1 cut(s) 17
EcoRI GAATTC 3 cut(s) 151, 235, 499
EcoRV GATATC 1 cut(s) 439
EcoT14I CCWWGG 1 cut(s) 552
ErhI CCWWGG 1 cut(s) 552
Esp3I CGTCTC 1 cut(s) 369
FaeI CATG 1 cut(s) 91
FatI CATG 1 cut(s) 87
FauI CCCGC 1 cut(s) 151
FauNDI CATATG 1 cut(s) 289
Fnu4HI GCNGC 1 cut(s) 548
FokI GGATG 1 cut(s) 356
Fsp4HI GCNGC 1 cut(s) 548
FspBI CTAG 3 cut(s) 147, 342, 491
GluI GCNGC 1 cut(s) 548
HaeIII GGCC 1 cut(s) 19
HgaI GACGC 1 cut(s) 386
Hin1II CATG 1 cut(s) 91
HindIII AAGCTT 1 cut(s) 450
HinfI GANTC 1 cut(s) 257
HphI GGTGA 3 cut(s) 162, 404, 436
Hpy188I TCNGA 6 cut(s) 118, 164, 184, 262, 374, 480
Hpy188III TCNNGA 3 cut(s) 232, 283, 386
HpyAV CCTTC 1 cut(s) 512
HpyF10VI GCNNNNNNNGC 1 cut(s) 494
HpyF3I CTNAG 7 cut(s) 161, 188, 479, 514, 534, 578, 590
Hsp92II CATG 1 cut(s) 91
Kzo9I GATC 5 cut(s) 59, 184, 400, 463, 556
LmnI GCTCC 1 cut(s) 494
LpnPI CCDG 5 cut(s) 33, 39, 56, 222, 322
Lsp1109I GCAGC 1 cut(s) 559
MaeI CTAG 3 cut(s) 147, 342, 491
MaeIII GTNAC 1 cut(s) 49
MalI GATC 5 cut(s) 61, 186, 402, 465, 558
MboI GATC 5 cut(s) 59, 184, 400, 463, 556
MboII GAAGA 3 cut(s) 208, 369, 433
MluCI AATT 5 cut(s) 151, 235, 467, 473, 499
MnlI CCTC 4 cut(s) 186, 287, 290, 474
MseI TTAA 2 cut(s) 351, 540
MspA1I CMGCKG 1 cut(s) 65
MwoI GCNNNNNNNGC 1 cut(s) 494
NdeI CATATG 1 cut(s) 289
NdeII GATC 5 cut(s) 59, 184, 400, 463, 556
NlaIII CATG 1 cut(s) 91
PfeI GAWTC 1 cut(s) 257
PflMI CCANNNNNTGG 1 cut(s) 315
PkrI GCNGC 1 cut(s) 549
PshBI ATTAAT 1 cut(s) 351
PsiI TTATAA 1 cut(s) 414
PspPI GGNCC 1 cut(s) 17
SaqAI TTAA 2 cut(s) 351, 540
SatI GCNGC 1 cut(s) 548
Sau3AI GATC 5 cut(s) 59, 184, 400, 463, 556
Sau96I GGNCC 1 cut(s) 17
SetI ASST 6 cut(s) 102, 249, 279, 454, 490, 628
Sse9I AATT 5 cut(s) 151, 235, 467, 473, 499
SsiI CCGC 2 cut(s) 65, 144
SspMI CTAG 3 cut(s) 147, 342, 491
StyI CCWWGG 1 cut(s) 552
TaqI TCGA 3 cut(s) 103, 284, 355
TasI AATT 5 cut(s) 151, 235, 467, 473, 499
TfiI GAWTC 1 cut(s) 257
Tru1I TTAA 2 cut(s) 351, 540
Tru9I TTAA 2 cut(s) 351, 540
TscAI CASTG 1 cut(s) 316
TseI GCWGC 1 cut(s) 547
TspDTI ATGAA 5 cut(s) 82, 144, 216, 353, 358
TspRI CASTG 1 cut(s) 316
Van91I CCANNNNNTGG 1 cut(s) 315
VspI ATTAAT 1 cut(s) 351
XagI CCTNNNNNAGG 1 cut(s) 251
XapI RAATTY 4 cut(s) 151, 235, 473, 499
XcmI CCANNNNNNNNNTGG 1 cut(s) 50
XspI CTAG 3 cut(s) 147, 342, 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.