RchiOBHm_Chr7g0207381

Protein of unknown function (DUF1191)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
24764356 .. 24764786
431 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 198 bp
ATGCAGAGAAAGAAGAAGAGTAATTCAAAAATGTGGATAATTGTTGGGTCTGTACTCAGTGGACTACCACTATTGGTGTTCATGCTAGTCTGGGTACATAAATACAAGGAAAGGAAGCATTTGGAAGAGATGGAGAAAGCTGCAGATTTAGAAGAAGCTCTGCATATGACAACAGTTGGGGATACAAAAGCACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

65

Amino Acids

7.55

Weight (kDa)

9.4

Isoelectric Point (pI)

19.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0021479)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0207381
rosa_laevigata RLG00000020901
rosa_rugosa Rorug04G0109800
rosa_samantha Rh1CG080100 Rh1DG086500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 54, 96
AgsI TTSAA 1 cut(s) 27
AluBI AGCT 2 cut(s) 140, 158
AluI AGCT 2 cut(s) 140, 158
ApeKI GCWGC 1 cut(s) 140
BbvI GCAGC 1 cut(s) 127
BccI CCATC 1 cut(s) 124
BciVI GTATCC 1 cut(s) 175
BfaI CTAG 1 cut(s) 86
BfmI CTRYAG 1 cut(s) 141
BfuI GTATCC 1 cut(s) 175
BisI GCNGC 1 cut(s) 141
BlsI GCNGC 1 cut(s) 142
BseMII CTCAG 1 cut(s) 70
BseXI GCAGC 1 cut(s) 127
BspCNI CTCAG 1 cut(s) 69
BspMAI CTGCAG 1 cut(s) 145
Bst4CI ACNGT 1 cut(s) 175
Bst6I CTCTTC 2 cut(s) 11, 120
BstDEI CTNAG 1 cut(s) 56
BstSFI CTRYAG 1 cut(s) 141
BstV1I GCAGC 1 cut(s) 127
BsuI GTATCC 1 cut(s) 175
BtsIMutI CAGTG 1 cut(s) 64
Csp6I GTAC 2 cut(s) 53, 95
CviAII CATG 1 cut(s) 82
CviJI RGCY 2 cut(s) 140, 158
CviKI_1 RGCY 2 cut(s) 140, 158
CviQI GTAC 2 cut(s) 53, 95
DdeI CTNAG 1 cut(s) 56
Eam1104I CTCTTC 2 cut(s) 11, 120
EarI CTCTTC 2 cut(s) 11, 120
FaeI CATG 1 cut(s) 85
FaiI YATR 4 cut(s) 83, 99, 165, 167
FatI CATG 1 cut(s) 81
FauNDI CATATG 1 cut(s) 165
Fnu4HI GCNGC 1 cut(s) 141
Fsp4HI GCNGC 1 cut(s) 141
FspBI CTAG 1 cut(s) 86
GluI GCNGC 1 cut(s) 141
Hin1II CATG 1 cut(s) 85
Hpy166II GTNNAC 1 cut(s) 62
Hpy8I GTNNAC 1 cut(s) 62
HpyCH4III ACNGT 1 cut(s) 175
HpyCH4V TGCA 3 cut(s) 4, 143, 163
HpyF3I CTNAG 1 cut(s) 56
Hsp92II CATG 1 cut(s) 85
LpnPI CCDG 1 cut(s) 76
Lsp1109I GCAGC 1 cut(s) 127
MaeI CTAG 1 cut(s) 86
MboII GAAGA 4 cut(s) 25, 28, 137, 164
MluCI AATT 2 cut(s) 22, 39
NdeI CATATG 1 cut(s) 165
NlaIII CATG 1 cut(s) 85
PkrI GCNGC 1 cut(s) 142
PstI CTGCAG 1 cut(s) 145
RsaI GTAC 2 cut(s) 54, 96
RsaNI GTAC 2 cut(s) 53, 95
SatI GCNGC 1 cut(s) 141
SetI ASST 2 cut(s) 142, 160
SfcI CTRYAG 1 cut(s) 141
SgeI CNNG 4 cut(s) 94, 98, 103, 118
Sse9I AATT 2 cut(s) 22, 39
SspMI CTAG 1 cut(s) 86
TaaI ACNGT 1 cut(s) 175
TasI AATT 2 cut(s) 22, 39
TatI WGTACW 1 cut(s) 52
TscAI CASTG 1 cut(s) 64
TseI GCWGC 1 cut(s) 140
TspDTI ATGAA 1 cut(s) 70
TspRI CASTG 1 cut(s) 64
XspI CTAG 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.