RLG00000020901

Protein of unknown function (DUF1191)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
69957627 .. 69958532
906 bp
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UTR
Exon/CDS
Intron
RLM00000020901

Sequence Viewer

Length: 327 bp
ATGGTGAGGAATTGGGGGCCTTATGACTCGGGGAAGAAGCAGTTGGCAAAGGCGATAATGGCGGAGATGGTGAGAGTTTTGGTGGATGAGAATAGGCTGAAGAGTGTTCCTGCGGAGATTGTTGGGGCTGCAAGTGGACAGAAGAAGAGTAATTCAAAAATGTGGATAATTGTTGGGTCTGTACTCGGCAGACTACCACTATTGGCATTCATGCTACTCTGGGTACATAAATACAAGGAAAGGAAGCATTTGGAAGAGATGGAGAAAGCTGCAGATTTAGAAGAAGCTCTGCATATGACCACAGTTGGAGATACAAAAGCACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

109

Amino Acids

12.16

Weight (kDa)

9.43

Isoelectric Point (pI)

25.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021479)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0207381
rosa_laevigata RLG00000020901
rosa_rugosa Rorug04G0109800
rosa_samantha Rh1CG080100 Rh1DG086500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 62, 113
AcuI CTGAAG 1 cut(s) 119
AfaI GTAC 2 cut(s) 183, 225
AgsI TTSAA 1 cut(s) 156
AjuI GAANNNNNNNTTGG 2 cut(s) 26, 58
AluBI AGCT 2 cut(s) 269, 287
AluI AGCT 2 cut(s) 269, 287
Ama87I CYCGRG 1 cut(s) 28
AoxI GGCC 1 cut(s) 17
ApeKI GCWGC 2 cut(s) 128, 269
AspS9I GGNCC 1 cut(s) 17
AsuHPI GGTGA 2 cut(s) 16, 82
AvaI CYCGRG 1 cut(s) 28
BbvI GCAGC 2 cut(s) 115, 256
BccI CCATC 2 cut(s) 61, 253
BfmI CTRYAG 1 cut(s) 270
BisI GCNGC 2 cut(s) 129, 270
BlsI GCNGC 2 cut(s) 130, 271
BmeT110I CYCGRG 1 cut(s) 28
BmgT120I GGNCC 1 cut(s) 17
BmiI GGNNCC 1 cut(s) 18
BseGI GGATG 1 cut(s) 91
BseXI GCAGC 2 cut(s) 115, 256
BshFI GGCC 1 cut(s) 19
BsiHKCI CYCGRG 1 cut(s) 28
BsmI GAATGC 1 cut(s) 206
BsnI GGCC 1 cut(s) 19
BsoBI CYCGRG 1 cut(s) 28
BspACI CCGC 2 cut(s) 62, 113
BspANI GGCC 1 cut(s) 19
BspLI GGNNCC 1 cut(s) 18
BspMAI CTGCAG 1 cut(s) 274
Bst4CI ACNGT 1 cut(s) 304
Bst6I CTCTTC 3 cut(s) 95, 140, 249
BstF5I GGATG 1 cut(s) 91
BstMWI GCNNNNNNNGC 1 cut(s) 59
BstSFI CTRYAG 1 cut(s) 270
BstV1I GCAGC 2 cut(s) 115, 256
BsuRI GGCC 1 cut(s) 19
BtsCI GGATG 1 cut(s) 91
Cfr13I GGNCC 1 cut(s) 17
Csp6I GTAC 2 cut(s) 182, 224
CviAII CATG 1 cut(s) 211
CviJI RGCY 5 cut(s) 19, 97, 128, 269, 287
CviKI_1 RGCY 5 cut(s) 19, 97, 128, 269, 287
CviQI GTAC 2 cut(s) 182, 224
Eam1104I CTCTTC 3 cut(s) 95, 140, 249
EarI CTCTTC 3 cut(s) 95, 140, 249
EciI GGCGGA 1 cut(s) 77
Eco57I CTGAAG 1 cut(s) 119
Eco88I CYCGRG 1 cut(s) 28
EcoO109I RGGNCCY 1 cut(s) 17
FaeI CATG 1 cut(s) 214
FaiI YATR 5 cut(s) 24, 212, 228, 294, 296
FatI CATG 1 cut(s) 210
FauNDI CATATG 1 cut(s) 294
Fnu4HI GCNGC 2 cut(s) 129, 270
FokI GGATG 1 cut(s) 98
Fsp4HI GCNGC 2 cut(s) 129, 270
GluI GCNGC 2 cut(s) 129, 270
HaeIII GGCC 1 cut(s) 19
Hin1II CATG 1 cut(s) 214
HinfI GANTC 1 cut(s) 26
HphI GGTGA 2 cut(s) 16, 82
Hpy166II GTNNAC 1 cut(s) 137
Hpy8I GTNNAC 1 cut(s) 137
HpyCH4III ACNGT 1 cut(s) 304
HpyCH4V TGCA 3 cut(s) 131, 272, 292
HpyF10VI GCNNNNNNNGC 1 cut(s) 59
Hsp92II CATG 1 cut(s) 214
LpnPI CCDG 2 cut(s) 123, 205
Lsp1109I GCAGC 2 cut(s) 115, 256
MboII GAAGA 6 cut(s) 46, 112, 154, 157, 266, 293
MluCI AATT 3 cut(s) 10, 151, 168
MlyI GAGTC 1 cut(s) 20
MmeI TCCRAC 1 cut(s) 286
MseI TTAA 1 cut(s) 325
Mva1269I GAATGC 1 cut(s) 206
MwoI GCNNNNNNNGC 1 cut(s) 59
NdeI CATATG 1 cut(s) 294
NlaIII CATG 1 cut(s) 214
NlaIV GGNNCC 1 cut(s) 18
NmeAIII GCCGAG 1 cut(s) 165
PctI GAATGC 1 cut(s) 206
PkrI GCNGC 2 cut(s) 130, 271
PleI GAGTC 1 cut(s) 20
PpsI GAGTC 1 cut(s) 20
PspN4I GGNNCC 1 cut(s) 18
PspPI GGNCC 1 cut(s) 17
PstI CTGCAG 1 cut(s) 274
RsaI GTAC 2 cut(s) 183, 225
RsaNI GTAC 2 cut(s) 182, 224
SaqAI TTAA 1 cut(s) 325
SatI GCNGC 2 cut(s) 129, 270
Sau96I GGNCC 1 cut(s) 17
SchI GAGTC 1 cut(s) 20
SetI ASST 2 cut(s) 271, 289
SfcI CTRYAG 1 cut(s) 270
SgeI CNNG 8 cut(s) 40, 42, 122, 144, 197, 223, 232, 247
Sse9I AATT 3 cut(s) 10, 151, 168
SsiI CCGC 2 cut(s) 62, 113
TaaI ACNGT 1 cut(s) 304
TasI AATT 3 cut(s) 10, 151, 168
TatI WGTACW 1 cut(s) 181
Tru1I TTAA 1 cut(s) 325
Tru9I TTAA 1 cut(s) 325
TseI GCWGC 2 cut(s) 128, 269
TspDTI ATGAA 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.