Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015124

Physical Location & Seq

Genomic Coordinates Reverse (-)

40038741 .. 40043649

Gene Structure 4909 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGCGACCCTGGTCGCAATGCCCAGGATGAGACTCAAATTCACATCCTTCCCTTCATTTCTGGGCCAATCCTACAGGCCCAGAAGACTCTCACTCTTCAATGGCAGAAGGGCCTTCTCAGTCTCGGCTTCTGCAACCCCAGACCAAGTGCGTGTCCGCTTTGCTCCTTCTCCTACTGGGAATCTCCACGTTGGTGGAGCCAGAACTGCCCTCTTCAATTACCTCTTTGCCAGGTCCAATGGAGGCAAGTTTGTTTTGAGAATTGAAGACACTGATTTGGAGAGGTCTACTAAGGAATCTGAGGAGGCTGTGTTGCGGGATCTCTCTTGGCTTGGTCTTGATTGGGATGAAGGACCCGGTGTGGATGGAGATTATGGGCCATATCGGCAATCAGAAAGAAATTCTTTGTACAAGCAGTATGCTGAGAAGCTTTTAGAGTCTGGTTATGTCTATCGCTGCTTTTGCTCCAGTGAGGAACTAGAAAAAATGAAGGAGATTGCAAAGCTGAAGCAACTGCCTCCAGTATACTCAGGAAAGTGGGCCAGTGCAACTAATGAAGAAGTACAAGTAGAGCTGGAAAAAGGAACTCCTTACACATATAGGTTTCGTGTTCCAAAGGAAGGAAGTCTGAAGATCAATGATCTCATTCGAGGGCAGGTCAGTTGGAACTTGGACACTCTTGGAGATTTTGTAATTATGAGAAGCAATGGTCAACCGGTGTACAATTTTTGTGTCACAGTTGATGATGCTACCATGGCTATCTCACATGTTATTAGAGCAGAGGAGCATTTACCAAATACTCTAAGGCAAGCGTTAATATATAAGGCACTAGGATTTCCAATGCCTTCCTTTGCACATGTATCCTTAATTCTTGCACCTGATCGAAGTAAGTTATCAAAAAGGCATGGAGCAACTTCAGTGGGCCAGTTTAGGGAGATGGGCTATCTACCACAGGCAATGGTGAACTACTTGGCACTGTTAGGTTGGGGTGATGGCACTGAAAATGAATTTTTCACCTTGGAGCAGCTAGTTGAAAAATTTTCAATTGGTCGTGTCAACAAAAGTGGTGCCATTTTCGACAATACCAAGTTAAGGTGGATGAATGGTCAACACTTACGAGCACTTCCATCAGAGGAGTTGAAAAAACGTATTGGTGAGCAATGGAAAAGTAGCGGTATCCTTACAGAATCAGAGGGTTCATTTGTAGAAGATGCAGTTGAGCTTCTTAAGGATGGGATTGATTTGGTACCAGATGCAGATAAAGCACTCTCAGACTTGCTAGCATATCCTTTACACACCACTTTAACCAGTCCGGAAGCCAAACCTCTCTTAGAAGACAACCTGTCTGAGTTTTCAGCCAGTTTCATAGCTGCTTATGACAATGGTGAACTCCTTGCCGCACTTGAAGAAGGCCATGCTGGTTGGAAGAACTGGGTGAAGAGCTTTGGCAAATCACTTAAGCGGAAGGGAAAATCACTTTTCATGCCCCTACGAGTGCTGTTAACAGGAAAGTTTCACGGCCCTGATATGGGGGTTAGCGTGCTTTTACTGCACAAAGCCGGAAAATATGGTGTTGTTACTCCTCAAACTGGGTTCGTGACACTGGATGAGAGGTTCAACAAATTGAGACAAGTTGACTGGGAAGCATTAACCAAGGATCAGCCTCTCCTGGAGACTGCAGAGGCAGTATCAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006424 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:0090567 GO:0099402 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko00970 ko01100 ko01110 ko01120 map00860 map00970 map01100 map01110 map01120

Pfam Domains

Protein Families

tRNA-synt_1c

Protein Analysis

565

Amino Acids

63.32

Weight (kDa)

7.16

Isoelectric Point (pI)

36.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1c	PF00749	49 - 366	7.2e-104	tRNA synthetases class I (E and Q), catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64050
fragaria_vesca	FvH4_2g14910
malus_domestica	MD05G1011800.v1.1 MD10G1011800.v1.1
prunus_persica	Prupe.8G016800_v2.0.a1 Prupe.8G016800_v2.0.a1
pyrus_communis	pycom05g00680
rosa_chinensis	RchiOBHm_Chr6g0277491
rosa_laevigata	RLG00000013297
rosa_multiflora	Rmu_sc0017670.1_g000002
rosa_roxburghii	Rroxscaffold_7G00191270
rosa_rugosa	Rorug06G0108700
rosa_samantha	Rh6BG223400 Rh6CG225900 Rh6DG216200
rosa_wichuraiana	Rw6G019220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	646
Acc65I	GGTACC	1 cut(s)	1246
AccB1I	GGYRCC	2 cut(s)	1067, 1246
AccI	GTMKAC	2 cut(s)	287, 525
AccIII	TCCGGA	1 cut(s)	1312
AciI	CCGC	5 cut(s)	157, 316, 1173, 1398, 1462
AclWI	GGATC	2 cut(s)	327, 1665
AcsI	RAATTY	4 cut(s)	38, 400, 1007, 1037
AcuI	CTGAAG	3 cut(s)	527, 650, 900
AfaI	GTAC	4 cut(s)	410, 564, 722, 1248
AfiI	CCNNNNNNNGG	6 cut(s)	620, 931, 1092, 1528, 1529, 1589
AflII	CTTAAG	2 cut(s)	1226, 1457
AflIII	ACRYGT	2 cut(s)	766, 856
AgeI	ACCGGT	1 cut(s)	715
AgsI	TTSAA	8 cut(s)	100, 217, 266, 1034, 1044, 1141, 1406, 1618
AhdI	GACNNNNNGTC	1 cut(s)	1342
AjnI	CCWGG	4 cut(s)	9, 23, 230, 1668
AleI	CACNNNNGTG	1 cut(s)	192
AloI	GAACNNNNNNTCC	2 cut(s)	1598, 1630
AluBI	AGCT	7 cut(s)	430, 505, 574, 1027, 1222, 1370, 1443
AluI	AGCT	7 cut(s)	430, 505, 574, 1027, 1222, 1370, 1443
Alw21I	GWGCWC	1 cut(s)	1123
Alw26I	GTCTC	4 cut(s)	25, 127, 1621, 1667
AlwI	GGATC	2 cut(s)	327, 1665
Aor13HI	TCCGGA	1 cut(s)	1312
AoxI	GGCC	8 cut(s)	64, 77, 111, 377, 540, 922, 1411, 1519
ApeKI	GCWGC	3 cut(s)	456, 1024, 1370
ApoI	RAATTY	4 cut(s)	38, 400, 1007, 1037
AsiGI	ACCGGT	1 cut(s)	715
Asp718I	GGTACC	1 cut(s)	1246
AspS9I	GGNCC	9 cut(s)	64, 78, 111, 234, 353, 377, 540, 922, 1520
AsuC2I	CCSGG	1 cut(s)	357
AsuHPI	GGTGA	6 cut(s)	973, 1001, 1006, 1166, 1397, 1447
AsuNHI	GCTAGC	1 cut(s)	1279
AvaII	GGWCC	2 cut(s)	234, 353
BanI	GGYRCC	2 cut(s)	1067, 1246
BbsI	GAAGAC	3 cut(s)	91, 273, 1341
Bbv12I	GWGCWC	1 cut(s)	1123
BbvI	GCAGC	3 cut(s)	443, 1036, 1357
BccI	CCATC	5 cut(s)	359, 931, 986, 1135, 1226
BceAI	ACGGC	1 cut(s)	1534
BciT130I	CCWGG	4 cut(s)	11, 25, 232, 1670
BciVI	GTATCC	2 cut(s)	871, 1187
BcnI	CCSGG	1 cut(s)	357
BcoDI	GTCTC	4 cut(s)	25, 127, 1621, 1667
BfaI	CTAG	4 cut(s)	479, 830, 1028, 1280
BfmI	CTRYAG	2 cut(s)	73, 1677
BfrI	CTTAAG	2 cut(s)	1226, 1457
BfuAI	ACCTGC	1 cut(s)	646
BfuI	GTATCC	2 cut(s)	871, 1187
BglI	GCCNNNNNGGC	1 cut(s)	385
BisI	GCNGC	4 cut(s)	457, 1025, 1371, 1398
BlsI	GCNGC	4 cut(s)	458, 1026, 1372, 1399
Bme1390I	CCNGG	5 cut(s)	11, 25, 232, 357, 1670
Bme18I	GGWCC	2 cut(s)	234, 353
BmeRI	GACNNNNNGTC	1 cut(s)	1342
BmgT120I	GGNCC	9 cut(s)	64, 78, 111, 234, 353, 377, 540, 922, 1520
BmiI	GGNNCC	4 cut(s)	199, 355, 1069, 1248
BmrFI	CCNGG	5 cut(s)	11, 25, 232, 357, 1670
BmrI	ACTGGG	4 cut(s)	186, 1441, 1599, 1648
BmsI	GCATC	3 cut(s)	736, 1201, 1243
BmtI	GCTAGC	1 cut(s)	1283
BmuI	ACTGGG	4 cut(s)	186, 1441, 1599, 1648
BoxI	GACNNNNGTC	1 cut(s)	11
BpiI	GAAGAC	3 cut(s)	91, 273, 1341
BpmI	CTGGAG	3 cut(s)	451, 504, 1691
BpuMI	CCSGG	1 cut(s)	357
BsaJI	CCNNGG	5 cut(s)	9, 23, 753, 1017, 1653
BsaWI	WCCGGW	2 cut(s)	715, 1312
BsaXI	ACNNNNNCTCC	4 cut(s)	296, 326, 675, 705
Bsc4I	CCNNNNNNNGG	6 cut(s)	620, 931, 1092, 1528, 1529, 1589
Bse118I	RCCGGY	1 cut(s)	715
Bse3DI	GCAATG	4 cut(s)	24, 712, 963, 1166
BseAI	TCCGGA	1 cut(s)	1312
BseBI	CCWGG	4 cut(s)	11, 25, 232, 1670
BseDI	CCNNGG	5 cut(s)	9, 23, 753, 1017, 1653
BseGI	GGATG	7 cut(s)	33, 44, 352, 370, 1104, 1237, 1612
BseLI	CCNNNNNNNGG	6 cut(s)	620, 931, 1092, 1528, 1529, 1589
BseMI	GCAATG	4 cut(s)	24, 712, 963, 1166
BseMII	CTCAG	6 cut(s)	132, 291, 414, 543, 1284, 1338
BseRI	GAGGAG	4 cut(s)	317, 797, 1148, 1572
BseXI	GCAGC	3 cut(s)	443, 1036, 1357
BsgI	GTGCAG	1 cut(s)	1535
BshFI	GGCC	8 cut(s)	66, 79, 113, 379, 542, 924, 1413, 1521
BshNI	GGYRCC	2 cut(s)	1067, 1246
BshTI	ACCGGT	1 cut(s)	715
BsiHKAI	GWGCWC	1 cut(s)	1123
BsiSI	CCGG	4 cut(s)	357, 716, 1313, 1560
BslI	CCNNNNNNNGG	6 cut(s)	620, 931, 1092, 1528, 1529, 1589
BsmAI	GTCTC	4 cut(s)	25, 127, 1621, 1667
BsnI	GGCC	8 cut(s)	66, 79, 113, 379, 542, 924, 1413, 1521
Bsp1286I	GDGCHC	1 cut(s)	1123
Bsp13I	TCCGGA	1 cut(s)	1312
Bsp1407I	TGTACA	2 cut(s)	408, 720
Bsp143I	GATC	5 cut(s)	319, 633, 640, 880, 1657
Bsp19I	CCATGG	1 cut(s)	753
BspACI	CCGC	5 cut(s)	157, 316, 1173, 1398, 1462
BspANI	GGCC	8 cut(s)	66, 79, 113, 379, 542, 924, 1413, 1521
BspCNI	CTCAG	6 cut(s)	131, 292, 415, 542, 1283, 1339
BspEI	TCCGGA	1 cut(s)	1312
BspLI	GGNNCC	4 cut(s)	199, 355, 1069, 1248
BspMAI	CTGCAG	1 cut(s)	1681
BspMI	ACCTGC	1 cut(s)	646
BspOI	GCTAGC	1 cut(s)	1283
BspPI	GGATC	2 cut(s)	327, 1665
BspQI	GCTCTTC	1 cut(s)	1433
BspT107I	GGYRCC	2 cut(s)	1067, 1246
BspTI	CTTAAG	2 cut(s)	1226, 1457
BsrDI	GCAATG	4 cut(s)	24, 712, 963, 1166
BsrFI	RCCGGY	1 cut(s)	715
BsrGI	TGTACA	2 cut(s)	408, 720
BssAI	RCCGGY	1 cut(s)	715
BssECI	CCNNGG	5 cut(s)	9, 23, 753, 1017, 1653
BssMI	GATC	5 cut(s)	319, 633, 640, 880, 1657
BssNAI	GTATAC	1 cut(s)	526
BssT1I	CCWWGG	3 cut(s)	753, 1017, 1653
Bst1107I	GTATAC	1 cut(s)	526
Bst2UI	CCWGG	4 cut(s)	11, 25, 232, 1670
Bst4CI	ACNGT	2 cut(s)	739, 978
Bst6I	CTCTTC	3 cut(s)	101, 218, 1433
BstAFI	CTTAAG	2 cut(s)	1226, 1457
BstAUI	TGTACA	2 cut(s)	408, 720
BstC8I	GCNNGC	3 cut(s)	810, 1281, 1541
BstDEI	CTNAG	9 cut(s)	118, 291, 300, 423, 529, 803, 1270, 1330, 1347
BstDSI	CCRYGG	1 cut(s)	753
BstF5I	GGATG	7 cut(s)	33, 44, 352, 370, 1104, 1237, 1612
BstKTI	GATC	5 cut(s)	322, 636, 643, 883, 1660
BstMAI	GTCTC	4 cut(s)	25, 127, 1621, 1667
BstMBI	GATC	5 cut(s)	319, 633, 640, 880, 1657
BstMWI	GCNNNNNNNGC	6 cut(s)	206, 385, 462, 755, 1262, 1549
BstNI	CCWGG	4 cut(s)	11, 25, 232, 1670
BstNSI	RCATGY	2 cut(s)	770, 860
BstPAI	GACNNNNGTC	1 cut(s)	11
BstSCI	CCNGG	5 cut(s)	9, 23, 230, 355, 1668
BstSFI	CTRYAG	2 cut(s)	73, 1677
BstV1I	GCAGC	3 cut(s)	443, 1036, 1357
BstV2I	GAAGAC	3 cut(s)	91, 273, 1341
BstX2I	RGATCY	1 cut(s)	319
BstXI	CCANNNNNNTGG	1 cut(s)	194
BstYI	RGATCY	1 cut(s)	319
BstZ17I	GTATAC	1 cut(s)	526
BsuI	GTATCC	2 cut(s)	871, 1187
BsuRI	GGCC	8 cut(s)	66, 79, 113, 379, 542, 924, 1413, 1521
BtgI	CCRYGG	1 cut(s)	753
BtsCI	GGATG	7 cut(s)	33, 44, 352, 370, 1104, 1237, 1612
BtsIMutI	CAGTG	7 cut(s)	270, 475, 550, 924, 974, 996, 1601
BveI	ACCTGC	1 cut(s)	646
Cac8I	GCNNGC	3 cut(s)	810, 1281, 1541
Cfr10I	RCCGGY	1 cut(s)	715
Cfr13I	GGNCC	9 cut(s)	64, 78, 111, 234, 353, 377, 540, 922, 1520
Csp6I	GTAC	4 cut(s)	409, 563, 721, 1247
CspAI	ACCGGT	1 cut(s)	715
CspCI	CAANNNNNGTGG	4 cut(s)	900, 935, 1045, 1080
CviAII	CATG	6 cut(s)	754, 767, 857, 905, 1415, 1483
CviQI	GTAC	4 cut(s)	409, 563, 721, 1247
DdeI	CTNAG	9 cut(s)	118, 291, 300, 423, 529, 803, 1270, 1330, 1347
DpnI	GATC	5 cut(s)	321, 635, 642, 882, 1659
DpnII	GATC	5 cut(s)	319, 633, 640, 880, 1657
DriI	GACNNNNNGTC	1 cut(s)	1342
Eam1104I	CTCTTC	3 cut(s)	101, 218, 1433
Eam1105I	GACNNNNNGTC	1 cut(s)	1342
EarI	CTCTTC	3 cut(s)	101, 218, 1433
Eco130I	CCWWGG	3 cut(s)	753, 1017, 1653
Eco47I	GGWCC	2 cut(s)	234, 353
Eco57I	CTGAAG	3 cut(s)	527, 650, 900
EcoO109I	RGGNCCY	2 cut(s)	111, 353
EcoRII	CCWGG	4 cut(s)	9, 23, 230, 1668
EcoT14I	CCWWGG	3 cut(s)	753, 1017, 1653
ErhI	CCWWGG	3 cut(s)	753, 1017, 1653
FaeI	CATG	6 cut(s)	757, 770, 860, 908, 1418, 1486
FalI	AAGNNNNNCTT	2 cut(s)	388, 420
FatI	CATG	6 cut(s)	753, 766, 856, 904, 1414, 1482
FauI	CCCGC	1 cut(s)	309
FblI	GTMKAC	2 cut(s)	287, 525
Fnu4HI	GCNGC	4 cut(s)	457, 1025, 1371, 1398
FokI	GGATG	7 cut(s)	31, 40, 359, 377, 1111, 1244, 1619
Fsp4HI	GCNGC	4 cut(s)	457, 1025, 1371, 1398
FspBI	CTAG	4 cut(s)	479, 830, 1028, 1280
GluI	GCNGC	4 cut(s)	457, 1025, 1371, 1398
GsuI	CTGGAG	3 cut(s)	451, 504, 1691
HaeIII	GGCC	8 cut(s)	66, 79, 113, 379, 542, 924, 1413, 1521
HapII	CCGG	4 cut(s)	357, 716, 1313, 1560
Hin1II	CATG	6 cut(s)	757, 770, 860, 908, 1418, 1486
HincII	GTYRAC	5 cut(s)	713, 1057, 1109, 1503, 1636
HindII	GTYRAC	5 cut(s)	713, 1057, 1109, 1503, 1636
HindIII	AAGCTT	1 cut(s)	428
HinfI	GANTC	6 cut(s)	33, 87, 181, 296, 437, 1187
HpaI	GTTAAC	1 cut(s)	1503
HpaII	CCGG	4 cut(s)	357, 716, 1313, 1560
HphI	GGTGA	6 cut(s)	973, 1001, 1006, 1166, 1397, 1447
Hpy188I	TCNGA	7 cut(s)	301, 394, 630, 1132, 1192, 1273, 1348
Hpy188III	TCNNGA	4 cut(s)	338, 531, 1313, 1597
HpyCH4III	ACNGT	2 cut(s)	739, 978
HpyCH4IV	ACGT	2 cut(s)	189, 1147
HpyCH4V	TGCA	9 cut(s)	134, 500, 548, 854, 875, 1214, 1256, 1552, 1679
HpyF10VI	GCNNNNNNNGC	6 cut(s)	206, 385, 462, 755, 1262, 1549
HpyF3I	CTNAG	9 cut(s)	118, 291, 300, 423, 529, 803, 1270, 1330, 1347
HpySE526I	ACGT	2 cut(s)	189, 1147
Hsp92II	CATG	6 cut(s)	757, 770, 860, 908, 1418, 1486
Kpn2I	TCCGGA	1 cut(s)	1312
KpnI	GGTACC	1 cut(s)	1250
KspAI	GTTAAC	1 cut(s)	1503
Kzo9I	GATC	5 cut(s)	319, 633, 640, 880, 1657
LguI	GCTCTTC	1 cut(s)	1433
LmnI	GCTCC	6 cut(s)	169, 197, 470, 784, 908, 1021
Lsp1109I	GCAGC	3 cut(s)	443, 1036, 1357
LweI	GCATC	3 cut(s)	736, 1201, 1243
MaeI	CTAG	4 cut(s)	479, 830, 1028, 1280
MaeII	ACGT	2 cut(s)	189, 1147
MaeIII	GTNAC	3 cut(s)	733, 1576, 1597
MalI	GATC	5 cut(s)	321, 635, 642, 882, 1659
MboI	GATC	5 cut(s)	319, 633, 640, 880, 1657
MfeI	CAATTG	1 cut(s)	1044
MflI	RGATCY	1 cut(s)	319
MhlI	GDGCHC	1 cut(s)	1123
MlyI	GAGTC	3 cut(s)	27, 81, 446
MmeI	TCCRAC	2 cut(s)	644, 1403
MroI	TCCGGA	1 cut(s)	1312
MseI	TTAA	8 cut(s)	815, 866, 1091, 1227, 1304, 1458, 1502, 1649
MslI	CAYNNNNRTG	1 cut(s)	192
MspCI	CTTAAG	2 cut(s)	1226, 1457
MspI	CCGG	4 cut(s)	357, 716, 1313, 1560
MspR9I	CCNGG	5 cut(s)	11, 25, 232, 357, 1670
MunI	CAATTG	1 cut(s)	1044
MvaI	CCWGG	4 cut(s)	11, 25, 232, 1670
MwoI	GCNNNNNNNGC	6 cut(s)	206, 385, 462, 755, 1262, 1549
NciI	CCSGG	1 cut(s)	357
NcoI	CCATGG	1 cut(s)	753
NdeII	GATC	5 cut(s)	319, 633, 640, 880, 1657
NheI	GCTAGC	1 cut(s)	1279
NlaIII	CATG	6 cut(s)	757, 770, 860, 908, 1418, 1486
NlaIV	GGNNCC	4 cut(s)	199, 355, 1069, 1248
NmeAIII	GCCGAG	1 cut(s)	104
NmuCI	GTSAC	2 cut(s)	733, 1597
NspI	RCATGY	2 cut(s)	770, 860
OliI	CACNNNNGTG	1 cut(s)	192
PciI	ACATGT	2 cut(s)	766, 856
PciSI	GCTCTTC	1 cut(s)	1433
PfeI	GAWTC	3 cut(s)	181, 296, 1187
PfoI	TCCNGGA	1 cut(s)	1668
PinAI	ACCGGT	1 cut(s)	715
PkrI	GCNGC	4 cut(s)	458, 1026, 1372, 1399
PleI	GAGTC	3 cut(s)	27, 81, 445
PpsI	GAGTC	3 cut(s)	27, 81, 445
PpuMI	RGGWCCY	1 cut(s)	353
PscI	ACATGT	2 cut(s)	766, 856
PshAI	GACNNNNGTC	1 cut(s)	11
Psp5II	RGGWCCY	1 cut(s)	353
Psp6I	CCWGG	4 cut(s)	9, 23, 230, 1668
PspGI	CCWGG	4 cut(s)	9, 23, 230, 1668
PspN4I	GGNNCC	4 cut(s)	199, 355, 1069, 1248
PspPI	GGNCC	9 cut(s)	64, 78, 111, 234, 353, 377, 540, 922, 1520
PspPPI	RGGWCCY	1 cut(s)	353
PstI	CTGCAG	1 cut(s)	1681
PsuI	RGATCY	1 cut(s)	319
RsaI	GTAC	4 cut(s)	410, 564, 722, 1248
RsaNI	GTAC	4 cut(s)	409, 563, 721, 1247
RseI	CAYNNNNRTG	1 cut(s)	192
SapI	GCTCTTC	1 cut(s)	1433
SaqAI	TTAA	8 cut(s)	815, 866, 1091, 1227, 1304, 1458, 1502, 1649
SatI	GCNGC	4 cut(s)	457, 1025, 1371, 1398
Sau3AI	GATC	5 cut(s)	319, 633, 640, 880, 1657
Sau96I	GGNCC	9 cut(s)	64, 78, 111, 234, 353, 377, 540, 922, 1520
SchI	GAGTC	3 cut(s)	27, 81, 446
ScrFI	CCNGG	5 cut(s)	11, 25, 232, 357, 1670
SduI	GDGCHC	1 cut(s)	1123
SfaNI	GCATC	3 cut(s)	736, 1201, 1243
SfcI	CTRYAG	2 cut(s)	73, 1677
SinI	GGWCC	2 cut(s)	234, 353
SmiMI	CAYNNNNRTG	1 cut(s)	192
SmlI	CTYRAG	2 cut(s)	1226, 1457
SmoI	CTYRAG	2 cut(s)	1226, 1457
SsiI	CCGC	5 cut(s)	157, 316, 1173, 1398, 1462
SspMI	CTAG	4 cut(s)	479, 830, 1028, 1280
StyD4I	CCNGG	5 cut(s)	9, 23, 230, 355, 1668
StyI	CCWWGG	3 cut(s)	753, 1017, 1653
TaaI	ACNGT	2 cut(s)	739, 978
TaiI	ACGT	2 cut(s)	192, 1150
TaqI	TCGA	3 cut(s)	649, 883, 1077
TatI	WGTACW	3 cut(s)	408, 562, 720
TauI	GCSGC	1 cut(s)	1400
TfiI	GAWTC	3 cut(s)	181, 296, 1187
Tru1I	TTAA	8 cut(s)	815, 866, 1091, 1227, 1304, 1458, 1502, 1649
Tru9I	TTAA	8 cut(s)	815, 866, 1091, 1227, 1304, 1458, 1502, 1649
TscAI	CASTG	7 cut(s)	277, 475, 550, 924, 981, 1003, 1608
TseFI	GTSAC	2 cut(s)	733, 1597
TseI	GCWGC	3 cut(s)	456, 1024, 1370
Tsp45I	GTSAC	2 cut(s)	733, 1597
TspDTI	ATGAA	9 cut(s)	45, 363, 503, 570, 1020, 1115, 1188, 1354, 1471
TspRI	CASTG	7 cut(s)	277, 475, 550, 924, 981, 1003, 1608
Vha464I	CTTAAG	2 cut(s)	1226, 1457
VpaK11BI	GGWCC	2 cut(s)	234, 353
XapI	RAATTY	4 cut(s)	38, 400, 1007, 1037
XceI	RCATGY	2 cut(s)	770, 860
XmiI	GTMKAC	2 cut(s)	287, 525
XspI	CTAG	4 cut(s)	479, 830, 1028, 1280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.