Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015781

Physical Location & Seq

Genomic Coordinates Reverse (-)

2439631 .. 2441543

Gene Structure 1913 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGGCAATCCAACAGCCTCTGCTTGATGCTCCCAAAGCTACTTCTTACTGCAAATTTCTCTATCTAATCCTCTCCTTAGCCGCTATTATAAGCTCGATCACCCTTGTTTCCATCCAAGTTATGATCAAAACCAGCTCCTCTATTTCTCGTCCAGGAGCCATGAGTGCTGATGTTGATCTACTACAAGGGCTCCTAGAAGAATCCACACCACACTTGCAAAAAGCCCTTGAGACGGCGAAAGATGCTTATACTAAGATCAATGATCATAAAGATCGAGCGGCTCTTGTCGATTGTGTGGAGCTGATGGATGTCACCATGGACAGGATTCTTGACTCTAGAGTGGCTCTCAAGAACTTGAAGGTGCAGAATACCATGGAAGATGTTCATACATGGCTTAGCAGCGTCCTCACTAACCATGTCACATGCTTGGATGGACTAGATGGACTATCAGCCCTGACTATAATGGAGCCTACGCTCAATGACTTGATATCAAGGTCAAAAGCCTTCCTAGCCAAGTTGGTTGCAATCTCTCCATTAAAAGAGAGAGTGATCGATGATCAGCCACTGAAAATTGGAGATTTCCCAACATGGGTCACAAGCAGGGACCGGAGGCTAATGTCGAGGGATTTTCATAAGGGAGTTGAGGCCAATGTTGTGGTGGCAAAAGATGGGAGTGGGAAATACAAGACTATAAAAGAAGCAGTGGCAGCAGCACCAGATAAGAGCACAACCAGGTATGTCATTTATGTGAAAAAGGGAACCTATAAGGAAAATGTTGAGGTTGTGAAGAATAAGAAGAACTTGATGATTGTTGGAGATGGCATGGATAAAACAATCATCACCGGCAGCCTCAATGTTGTTGATGGATCAACCACTTTCAAATCTGCGACTCTAGCTGCCGTTGGTGACGGATTTATCGCCCAAGACATTTGGTTCCAAAACACAGCTGGCCCGGAAAAGCACCAAGCTGTTGCACTTCGAGTCGGAGCCGATCAATCCGTGATAAACCGGTGTCGCATTGACGCTTACCAAGACACTCTCTATACCCACTCCAATAGGCAGTTCTTCCGAGACTCCTACATAACAGGTACCATAGACTTCATATTTGGAAATGCAGCCGTAGTACTTCAGAATTGTAAGATCGTGGCACGAAAACCCGCGAGTGGACAAAACAACATGGTCACGGCACAAGGTCGGACGGACCCTAATCAAAACACCGGGACTTCCATTCAAAAATGCGAAGTAATTGCAAGTTCAGACCTAGAGCCGGTGAAAGGGAAAGTCCGATCTTACTTGGGCCGCCCCTGGAAGGAATACTCTAGGACTGTTGTGATGCAGTCCACCATTGGTGACCTCATTGACCCAGCTGGGTGGTCTATATGGAGTGGAGACTTTGCTCTGAAGACACTGTATTATGGTGAATATGCTAATAGTGGACCCGGGGCGGGTACTAGCAAGAGAGTGACTTGGGCCGGGTATCATGTCATTAAACGTGCATCAGAGGCCCAGAGTTTCACTGTTGCTGGGCTTATACAAGGTGGGTCATGGTTGAAGTCCACCGGGGTTTCTTTTACCGAAGGGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0016020 GO:0016787 GO:0016788 GO:0030234 GO:0030312 GO:0030599 GO:0031090 GO:0043086 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046910 GO:0050790 GO:0050896 GO:0051704 GO:0051707 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098588 GO:0098772 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

528

Amino Acids

57.7

Weight (kDa)

8.85

Isoelectric Point (pI)

24.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	58 - 173	8.4e-16	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	217 - 513	1.9e-149	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015781)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11580 AT1G11580
fragaria_vesca	FvH4_3g02560
malus_domestica	MD05G1341800.v1.1
prunus_persica	Prupe.4G025200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0003871
rosa_laevigata	RLG00000031185
rosa_multiflora	Rmu_sc0011733.1_g000006
rosa_roxburghii	Rroxscaffold_1G00072100
rosa_rugosa	Rorug04G0407600
rosa_samantha	Rh5AG035100 Rh5BG033600 Rh5CG037500 Rh5DG033800
rosa_wichuraiana	Rw5G003210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	89
Acc65I	GGTACC	1 cut(s)	1088
AccB1I	GGYRCC	1 cut(s)	1088
AccBSI	CCGCTC	1 cut(s)	278
AccII	CGCG	1 cut(s)	1160
AciI	CCGC	5 cut(s)	81, 278, 1158, 1300, 1445
AclWI	GGATC	1 cut(s)	874
AcsI	RAATTY	1 cut(s)	53
AcuI	CTGAAG	2 cut(s)	1112, 1421
AfaI	GTAC	3 cut(s)	1090, 1125, 1450
AfiI	CCNNNNNNNGG	8 cut(s)	232, 321, 589, 1163, 1267, 1274, 1309, 1445
AgeI	ACCGGT	1 cut(s)	1008
AgsI	TTSAA	4 cut(s)	358, 880, 1232, 1552
AjnI	CCWGG	3 cut(s)	151, 731, 1304
AjuI	GAANNNNNNNTTGG	2 cut(s)	1046, 1078
AluBI	AGCT	8 cut(s)	38, 93, 135, 301, 896, 947, 968, 1367
AluI	AGCT	8 cut(s)	38, 93, 135, 301, 896, 947, 968, 1367
Alw21I	GWGCWC	1 cut(s)	728
Alw26I	GTCTC	3 cut(s)	224, 1065, 1383
AlwI	GGATC	1 cut(s)	874
AlwNI	CAGNNNCTG	2 cut(s)	19, 565
Ama87I	CYCGRG	1 cut(s)	1439
AoxI	GGCC	5 cut(s)	645, 949, 1297, 1470, 1503
ApeKI	GCWGC	6 cut(s)	399, 707, 710, 846, 896, 1115
ApoI	RAATTY	1 cut(s)	53
ArsI	GACNNNNNNTTYG	2 cut(s)	1088, 1120
AsiGI	ACCGGT	1 cut(s)	1008
Asp700I	GAANNNNTTC	1 cut(s)	381
Asp718I	GGTACC	1 cut(s)	1088
AspS9I	GGNCC	7 cut(s)	604, 950, 1201, 1297, 1436, 1470, 1504
AsuC2I	CCSGG	6 cut(s)	953, 1219, 1440, 1441, 1474, 1561
AsuHPI	GGTGA	7 cut(s)	91, 304, 832, 917, 1282, 1361, 1430
AvaI	CYCGRG	1 cut(s)	1439
AvaII	GGWCC	3 cut(s)	604, 1201, 1436
BanI	GGYRCC	1 cut(s)	1088
BanII	GRGCYC	1 cut(s)	192
BbsI	GAAGAC	1 cut(s)	1409
Bbv12I	GWGCWC	1 cut(s)	728
BbvI	GCAGC	6 cut(s)	411, 719, 722, 858, 883, 1127
BccI	CCATC	7 cut(s)	119, 298, 425, 434, 662, 812, 857
BceAI	ACGGC	4 cut(s)	249, 884, 1103, 1200
BcgI	CGANNNNNNTGC	2 cut(s)	1229, 1263
BciT130I	CCWGG	3 cut(s)	153, 733, 1306
BclI	TGATCA	3 cut(s)	123, 262, 556
BcnI	CCSGG	6 cut(s)	953, 1219, 1440, 1441, 1474, 1561
BcoDI	GTCTC	3 cut(s)	224, 1065, 1383
BfaI	CTAG	8 cut(s)	194, 336, 437, 509, 893, 1262, 1320, 1452
BisI	GCNGC	9 cut(s)	81, 279, 400, 708, 711, 847, 897, 1116, 1300
BlpI	GCTNAGC	1 cut(s)	395
BlsI	GCNGC	9 cut(s)	82, 280, 401, 709, 712, 848, 898, 1117, 1301
BmcAI	AGTACT	1 cut(s)	1125
Bme1390I	CCNGG	9 cut(s)	153, 733, 953, 1219, 1306, 1440, 1441, 1474, 1561
Bme18I	GGWCC	3 cut(s)	604, 1201, 1436
BmeT110I	CYCGRG	1 cut(s)	1439
BmgT120I	GGNCC	7 cut(s)	604, 950, 1201, 1297, 1436, 1470, 1504
BmrFI	CCNGG	9 cut(s)	153, 733, 953, 1219, 1306, 1440, 1441, 1474, 1561
BmsI	GCATC	4 cut(s)	16, 232, 1323, 1505
BpiI	GAAGAC	1 cut(s)	1409
BplI	GAGNNNNNCTC	2 cut(s)	330, 362
Bpu10I	CCTNAGC	1 cut(s)	76
Bpu1102I	GCTNAGC	1 cut(s)	395
BpuEI	CTTGAG	2 cut(s)	248, 332
BpuMI	CCSGG	6 cut(s)	953, 1219, 1440, 1441, 1474, 1561
Bsa29I	ATCGAT	1 cut(s)	552
BsaBI	GATNNNNATC	1 cut(s)	174
BsaJI	CCNNGG	6 cut(s)	315, 372, 1304, 1439, 1440, 1560
BsaWI	WCCGGW	2 cut(s)	606, 1008
BsaXI	ACNNNNNCTCC	2 cut(s)	174, 204
Bsc4I	CCNNNNNNNGG	8 cut(s)	232, 321, 589, 1163, 1267, 1274, 1309, 1445
Bse118I	RCCGGY	3 cut(s)	842, 1008, 1267
Bse8I	GATNNNNATC	1 cut(s)	174
BseBI	CCWGG	3 cut(s)	153, 733, 1306
BseCI	ATCGAT	1 cut(s)	552
BseDI	CCNNGG	6 cut(s)	315, 372, 1304, 1439, 1440, 1560
BseGI	GGATG	3 cut(s)	111, 313, 436
BseJI	GATNNNNATC	1 cut(s)	174
BseLI	CCNNNNNNNGG	8 cut(s)	232, 321, 589, 1163, 1267, 1274, 1309, 1445
BseRI	GAGGAG	1 cut(s)	127
BseXI	GCAGC	6 cut(s)	411, 719, 722, 858, 883, 1127
BseYI	CCCAGC	3 cut(s)	1363, 1367, 1523
BsgI	GTGCAG	1 cut(s)	383
Bsh1236I	CGCG	1 cut(s)	1160
BshFI	GGCC	5 cut(s)	647, 951, 1299, 1472, 1505
BshNI	GGYRCC	1 cut(s)	1088
BshTI	ACCGGT	1 cut(s)	1008
BshVI	ATCGAT	1 cut(s)	552
BsiHKAI	GWGCWC	1 cut(s)	728
BsiHKCI	CYCGRG	1 cut(s)	1439
BsiSI	CCGG	9 cut(s)	607, 843, 953, 1009, 1218, 1268, 1440, 1473, 1560
BslFI	GGGAC	2 cut(s)	617, 1234
BslI	CCNNNNNNNGG	8 cut(s)	232, 321, 589, 1163, 1267, 1274, 1309, 1445
BsmAI	GTCTC	3 cut(s)	224, 1065, 1383
BsmBI	CGTCTC	1 cut(s)	224
BsmFI	GGGAC	2 cut(s)	617, 1234
BsnI	GGCC	5 cut(s)	647, 951, 1299, 1472, 1505
BsoBI	CYCGRG	1 cut(s)	1439
Bsp1286I	GDGCHC	2 cut(s)	192, 728
Bsp1720I	GCTNAGC	1 cut(s)	395
Bsp19I	CCATGG	2 cut(s)	315, 372
BspACI	CCGC	5 cut(s)	81, 278, 1158, 1300, 1445
BspANI	GGCC	5 cut(s)	647, 951, 1299, 1472, 1505
BspDI	ATCGAT	1 cut(s)	552
BspFNI	CGCG	1 cut(s)	1160
BspPI	GGATC	1 cut(s)	874
BspT107I	GGYRCC	1 cut(s)	1088
BsrBI	CCGCTC	1 cut(s)	278
BsrFI	RCCGGY	3 cut(s)	842, 1008, 1267
BssAI	RCCGGY	3 cut(s)	842, 1008, 1267
BssECI	CCNNGG	6 cut(s)	315, 372, 1304, 1439, 1440, 1560
BssT1I	CCWWGG	2 cut(s)	315, 372
Bst2UI	CCWGG	3 cut(s)	153, 733, 1306
Bst4CI	ACNGT	3 cut(s)	1327, 1410, 1519
BstC8I	GCNNGC	1 cut(s)	949
BstDEI	CTNAG	3 cut(s)	76, 252, 395
BstDSI	CCRYGG	2 cut(s)	315, 372
BstEII	GGTNACC	1 cut(s)	1349
BstF5I	GGATG	3 cut(s)	111, 313, 436
BstFNI	CGCG	1 cut(s)	1160
BstMAI	GTCTC	3 cut(s)	224, 1065, 1383
BstMWI	GCNNNNNNNGC	7 cut(s)	35, 164, 242, 509, 707, 893, 1502
BstNI	CCWGG	3 cut(s)	153, 733, 1306
BstNSI	RCATGY	1 cut(s)	426
BstPI	GGTNACC	1 cut(s)	1349
BstSCI	CCNGG	9 cut(s)	151, 731, 951, 1217, 1304, 1438, 1439, 1472, 1559
BstUI	CGCG	1 cut(s)	1160
BstV1I	GCAGC	6 cut(s)	411, 719, 722, 858, 883, 1127
BstV2I	GAAGAC	1 cut(s)	1409
BstXI	CCANNNNNNTGG	2 cut(s)	655, 1371
Bsu15I	ATCGAT	1 cut(s)	552
BsuRI	GGCC	5 cut(s)	647, 951, 1299, 1472, 1505
BsuTUI	ATCGAT	1 cut(s)	552
BtgI	CCRYGG	2 cut(s)	315, 372
BtsCI	GGATG	3 cut(s)	111, 313, 436
BtsI	GCAGTG	1 cut(s)	708
BtsIMutI	CAGTG	4 cut(s)	563, 708, 1406, 1515
Cac8I	GCNNGC	1 cut(s)	949
CaiI	CAGNNNCTG	2 cut(s)	19, 565
Cfr10I	RCCGGY	3 cut(s)	842, 1008, 1267
Cfr13I	GGNCC	7 cut(s)	604, 950, 1201, 1297, 1436, 1470, 1504
Cfr9I	CCCGGG	1 cut(s)	1439
ClaI	ATCGAT	1 cut(s)	552
CseI	GACGC	2 cut(s)	391, 1031
CsiI	ACCWGGT	1 cut(s)	731
Csp6I	GTAC	3 cut(s)	1089, 1124, 1449
CspAI	ACCGGT	1 cut(s)	1008
CviQI	GTAC	3 cut(s)	1089, 1124, 1449
DdeI	CTNAG	3 cut(s)	76, 252, 395
Eco130I	CCWWGG	2 cut(s)	315, 372
Eco24I	GRGCYC	1 cut(s)	192
Eco32I	GATATC	1 cut(s)	489
Eco47I	GGWCC	3 cut(s)	604, 1201, 1436
Eco57I	CTGAAG	2 cut(s)	1112, 1421
Eco88I	CYCGRG	1 cut(s)	1439
Eco91I	GGTNACC	1 cut(s)	1349
EcoO65I	GGTNACC	1 cut(s)	1349
EcoRII	CCWGG	3 cut(s)	151, 731, 1304
EcoRV	GATATC	1 cut(s)	489
EcoT14I	CCWWGG	2 cut(s)	315, 372
EcoT38I	GRGCYC	1 cut(s)	192
ErhI	CCWWGG	2 cut(s)	315, 372
Esp3I	CGTCTC	1 cut(s)	224
FalI	AAGNNNNNCTT	2 cut(s)	785, 817
FaqI	GGGAC	2 cut(s)	617, 1234
FauI	CCCGC	2 cut(s)	1165, 1438
FbaI	TGATCA	3 cut(s)	123, 262, 556
Fnu4HI	GCNGC	9 cut(s)	81, 279, 400, 708, 711, 847, 897, 1116, 1300
FokI	GGATG	3 cut(s)	98, 320, 443
FriOI	GRGCYC	1 cut(s)	192
Fsp4HI	GCNGC	9 cut(s)	81, 279, 400, 708, 711, 847, 897, 1116, 1300
FspBI	CTAG	8 cut(s)	194, 336, 437, 509, 893, 1262, 1320, 1452
GluI	GCNGC	9 cut(s)	81, 279, 400, 708, 711, 847, 897, 1116, 1300
GsaI	CCCAGC	3 cut(s)	1367, 1371, 1527
HaeIII	GGCC	5 cut(s)	647, 951, 1299, 1472, 1505
HapII	CCGG	9 cut(s)	607, 843, 953, 1009, 1218, 1268, 1440, 1473, 1560
HgaI	GACGC	2 cut(s)	391, 1031
HinfI	GANTC	6 cut(s)	200, 325, 332, 889, 981, 1073
HpaII	CCGG	9 cut(s)	607, 843, 953, 1009, 1218, 1268, 1440, 1473, 1560
HphI	GGTGA	7 cut(s)	91, 304, 832, 917, 1282, 1361, 1430
Hpy166II	GTNNAC	4 cut(s)	1166, 1341, 1436, 1557
Hpy188I	TCNGA	8 cut(s)	986, 1070, 1131, 1197, 1258, 1286, 1401, 1501
Hpy188III	TCNNGA	3 cut(s)	329, 336, 349
Hpy8I	GTNNAC	4 cut(s)	1166, 1341, 1436, 1557
HpyAV	CCTTC	4 cut(s)	352, 514, 1303, 1571
HpyCH4III	ACNGT	3 cut(s)	1327, 1410, 1519
HpyCH4IV	ACGT	1 cut(s)	1492
HpyCH4V	TGCA	9 cut(s)	51, 217, 364, 524, 974, 1115, 1250, 1336, 1496
HpyF10VI	GCNNNNNNNGC	7 cut(s)	35, 164, 242, 509, 707, 893, 1502
HpyF3I	CTNAG	3 cut(s)	76, 252, 395
HpySE526I	ACGT	1 cut(s)	1492
KpnI	GGTACC	1 cut(s)	1092
Ksp22I	TGATCA	3 cut(s)	123, 262, 556
LmnI	GCTCC	7 cut(s)	34, 140, 155, 195, 298, 466, 986
Lsp1109I	GCAGC	6 cut(s)	411, 719, 722, 858, 883, 1127
LweI	GCATC	4 cut(s)	16, 232, 1323, 1505
MabI	ACCWGGT	1 cut(s)	731
MaeI	CTAG	8 cut(s)	194, 336, 437, 509, 893, 1262, 1320, 1452
MaeII	ACGT	1 cut(s)	1492
MaeIII	GTNAC	7 cut(s)	310, 418, 592, 905, 1180, 1349, 1462
MbiI	CCGCTC	1 cut(s)	278
MboII	GAAGA	6 cut(s)	209, 389, 799, 808, 1057, 1414
MhlI	GDGCHC	2 cut(s)	192, 728
MluCI	AATT	4 cut(s)	53, 570, 1132, 1245
MlyI	GAGTC	4 cut(s)	326, 883, 990, 1067
MmeI	TCCRAC	4 cut(s)	34, 793, 964, 1175
MroXI	GAANNNNTTC	1 cut(s)	381
MseI	TTAA	2 cut(s)	536, 1488
MslI	CAYNNNNRTG	1 cut(s)	746
MspA1I	CMGCKG	2 cut(s)	947, 1367
MspI	CCGG	9 cut(s)	607, 843, 953, 1009, 1218, 1268, 1440, 1473, 1560
MspR9I	CCNGG	9 cut(s)	153, 733, 953, 1219, 1306, 1440, 1441, 1474, 1561
MvaI	CCWGG	3 cut(s)	153, 733, 1306
MvnI	CGCG	1 cut(s)	1160
MwoI	GCNNNNNNNGC	7 cut(s)	35, 164, 242, 509, 707, 893, 1502
NciI	CCSGG	6 cut(s)	953, 1219, 1440, 1441, 1474, 1561
NcoI	CCATGG	2 cut(s)	315, 372
NmuCI	GTSAC	7 cut(s)	310, 418, 592, 905, 1180, 1349, 1462
NspI	RCATGY	1 cut(s)	426
PdmI	GAANNNNTTC	1 cut(s)	381
PfeI	GAWTC	2 cut(s)	200, 325
PfoI	TCCNGGA	1 cut(s)	151
PinAI	ACCGGT	1 cut(s)	1008
PkrI	GCNGC	9 cut(s)	82, 280, 401, 709, 712, 848, 898, 1117, 1301
PleI	GAGTC	4 cut(s)	326, 883, 989, 1067
PpsI	GAGTC	4 cut(s)	326, 883, 989, 1067
PsiI	TTATAA	1 cut(s)	89
Psp6I	CCWGG	3 cut(s)	151, 731, 1304
PspEI	GGTNACC	1 cut(s)	1349
PspFI	CCCAGC	3 cut(s)	1363, 1367, 1523
PspGI	CCWGG	3 cut(s)	151, 731, 1304
PspPI	GGNCC	7 cut(s)	604, 950, 1201, 1297, 1436, 1470, 1504
PstNI	CAGNNNCTG	2 cut(s)	19, 565
PvuII	CAGCTG	2 cut(s)	947, 1367
RsaI	GTAC	3 cut(s)	1090, 1125, 1450
RsaNI	GTAC	3 cut(s)	1089, 1124, 1449
RseI	CAYNNNNRTG	1 cut(s)	746
SaqAI	TTAA	2 cut(s)	536, 1488
SatI	GCNGC	9 cut(s)	81, 279, 400, 708, 711, 847, 897, 1116, 1300
Sau96I	GGNCC	7 cut(s)	604, 950, 1201, 1297, 1436, 1470, 1504
ScaI	AGTACT	1 cut(s)	1125
SchI	GAGTC	4 cut(s)	326, 883, 990, 1067
ScrFI	CCNGG	9 cut(s)	153, 733, 953, 1219, 1306, 1440, 1441, 1474, 1561
SduI	GDGCHC	2 cut(s)	192, 728
SexAI	ACCWGGT	1 cut(s)	731
SfaNI	GCATC	4 cut(s)	16, 232, 1323, 1505
SinI	GGWCC	3 cut(s)	604, 1201, 1436
SmaI	CCCGGG	1 cut(s)	1441
SmiMI	CAYNNNNRTG	1 cut(s)	746
SmlI	CTYRAG	2 cut(s)	227, 347
SmoI	CTYRAG	2 cut(s)	227, 347
Sse9I	AATT	4 cut(s)	53, 570, 1132, 1245
SsiI	CCGC	5 cut(s)	81, 278, 1158, 1300, 1445
SspMI	CTAG	8 cut(s)	194, 336, 437, 509, 893, 1262, 1320, 1452
StyD4I	CCNGG	9 cut(s)	151, 731, 951, 1217, 1304, 1438, 1439, 1472, 1559
StyI	CCWWGG	2 cut(s)	315, 372
TaaI	ACNGT	3 cut(s)	1327, 1410, 1519
TaiI	ACGT	1 cut(s)	1495
TaqI	TCGA	6 cut(s)	95, 274, 288, 552, 620, 979
TasI	AATT	4 cut(s)	53, 570, 1132, 1245
TatI	WGTACW	1 cut(s)	1123
TauI	GCSGC	3 cut(s)	83, 281, 1302
TfiI	GAWTC	2 cut(s)	200, 325
Tru1I	TTAA	2 cut(s)	536, 1488
Tru9I	TTAA	2 cut(s)	536, 1488
TscAI	CASTG	4 cut(s)	570, 708, 1413, 1522
TseFI	GTSAC	7 cut(s)	310, 418, 592, 905, 1180, 1349, 1462
TseI	GCWGC	6 cut(s)	399, 707, 710, 846, 896, 1115
Tsp45I	GTSAC	7 cut(s)	310, 418, 592, 905, 1180, 1349, 1462
TspDTI	ATGAA	3 cut(s)	374, 620, 1090
TspGWI	ACGGA	3 cut(s)	924, 988, 1214
TspMI	CCCGGG	1 cut(s)	1439
TspRI	CASTG	4 cut(s)	570, 708, 1413, 1522
VpaK11BI	GGWCC	3 cut(s)	604, 1201, 1436
XapI	RAATTY	1 cut(s)	53
XbaI	TCTAGA	1 cut(s)	335
XceI	RCATGY	1 cut(s)	426
XcmI	CCANNNNNNNNNTGG	2 cut(s)	655, 944
XmaI	CCCGGG	1 cut(s)	1439
XmnI	GAANNNNTTC	1 cut(s)	381
XspI	CTAG	8 cut(s)	194, 336, 437, 509, 893, 1262, 1320, 1452
ZrmI	AGTACT	1 cut(s)	1125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.