EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0030641 |
| rosa_multiflora | Rmu_co8427705.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00123230 |
| rosa_rugosa | Rorug05G0119000 |
| rosa_samantha | Rh5BG210300 Rh5CG234000 Rh5DG215300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AdeI | CACNNNGTG | 1 cut(s) | 164 |
| AgeI | ACCGGT | 1 cut(s) | 189 |
| AgsI | TTSAA | 3 cut(s) | 217, 238, 254 |
| AjnI | CCWGG | 1 cut(s) | 21 |
| AluBI | AGCT | 2 cut(s) | 35, 220 |
| AluI | AGCT | 2 cut(s) | 35, 220 |
| AsiGI | ACCGGT | 1 cut(s) | 189 |
| AspS9I | GGNCC | 1 cut(s) | 195 |
| AsuC2I | CCSGG | 1 cut(s) | 162 |
| AsuHPI | GGTGA | 1 cut(s) | 150 |
| AvaII | GGWCC | 1 cut(s) | 195 |
| BbsI | GAAGAC | 1 cut(s) | 205 |
| BccI | CCATC | 1 cut(s) | 65 |
| BciT130I | CCWGG | 1 cut(s) | 23 |
| BcnI | CCSGG | 1 cut(s) | 162 |
| Bme1390I | CCNGG | 2 cut(s) | 23, 162 |
| Bme18I | GGWCC | 1 cut(s) | 195 |
| BmgT120I | GGNCC | 1 cut(s) | 195 |
| BmrFI | CCNGG | 2 cut(s) | 23, 162 |
| BmsI | GCATC | 2 cut(s) | 133, 164 |
| BpiI | GAAGAC | 1 cut(s) | 205 |
| BpuEI | CTTGAG | 1 cut(s) | 21 |
| BpuMI | CCSGG | 1 cut(s) | 162 |
| BsaJI | CCNNGG | 2 cut(s) | 21, 22 |
| BsaWI | WCCGGW | 1 cut(s) | 189 |
| Bse118I | RCCGGY | 1 cut(s) | 189 |
| BseBI | CCWGG | 1 cut(s) | 23 |
| BseDI | CCNNGG | 2 cut(s) | 21, 22 |
| BshTI | ACCGGT | 1 cut(s) | 189 |
| BsiSI | CCGG | 2 cut(s) | 162, 190 |
| BsrFI | RCCGGY | 1 cut(s) | 189 |
| BssAI | RCCGGY | 1 cut(s) | 189 |
| BssECI | CCNNGG | 2 cut(s) | 21, 22 |
| Bst2UI | CCWGG | 1 cut(s) | 23 |
| BstC8I | GCNNGC | 1 cut(s) | 259 |
| BstDEI | CTNAG | 1 cut(s) | 13 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 152, 226 |
| BstNI | CCWGG | 1 cut(s) | 23 |
| BstSCI | CCNGG | 2 cut(s) | 21, 160 |
| BstV2I | GAAGAC | 1 cut(s) | 205 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 192 |
| Cac8I | GCNNGC | 1 cut(s) | 259 |
| Cfr10I | RCCGGY | 1 cut(s) | 189 |
| Cfr13I | GGNCC | 1 cut(s) | 195 |
| CspAI | ACCGGT | 1 cut(s) | 189 |
| CviAII | CATG | 1 cut(s) | 58 |
| CviJI | RGCY | 6 cut(s) | 17, 35, 91, 168, 181, 220 |
| CviKI_1 | RGCY | 6 cut(s) | 17, 35, 91, 168, 181, 220 |
| DdeI | CTNAG | 1 cut(s) | 13 |
| DraIII | CACNNNGTG | 1 cut(s) | 164 |
| Eco47I | GGWCC | 1 cut(s) | 195 |
| EcoRII | CCWGG | 1 cut(s) | 21 |
| FaeI | CATG | 1 cut(s) | 61 |
| FaiI | YATR | 1 cut(s) | 59 |
| FatI | CATG | 1 cut(s) | 57 |
| HapII | CCGG | 2 cut(s) | 162, 190 |
| Hin1II | CATG | 1 cut(s) | 61 |
| HincII | GTYRAC | 1 cut(s) | 64 |
| HindII | GTYRAC | 1 cut(s) | 64 |
| HinfI | GANTC | 3 cut(s) | 106, 115, 265 |
| HpaI | GTTAAC | 1 cut(s) | 64 |
| HpaII | CCGG | 2 cut(s) | 162, 190 |
| HphI | GGTGA | 1 cut(s) | 150 |
| Hpy166II | GTNNAC | 2 cut(s) | 64, 195 |
| Hpy188I | TCNGA | 2 cut(s) | 100, 111 |
| Hpy188III | TCNNGA | 1 cut(s) | 185 |
| Hpy8I | GTNNAC | 2 cut(s) | 64, 195 |
| HpyAV | CCTTC | 1 cut(s) | 15 |
| HpyCH4V | TGCA | 1 cut(s) | 155 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 152, 226 |
| HpyF3I | CTNAG | 1 cut(s) | 13 |
| Hsp92II | CATG | 1 cut(s) | 61 |
| KspAI | GTTAAC | 1 cut(s) | 64 |
| LpnPI | CCDG | 6 cut(s) | 8, 35, 175, 198, 203, 243 |
| LweI | GCATC | 2 cut(s) | 133, 164 |
| MboII | GAAGA | 2 cut(s) | 124, 205 |
| MfeI | CAATTG | 1 cut(s) | 245 |
| MluCI | AATT | 2 cut(s) | 238, 245 |
| MnlI | CCTC | 3 cut(s) | 28, 113, 146 |
| MseI | TTAA | 1 cut(s) | 63 |
| MspI | CCGG | 2 cut(s) | 162, 190 |
| MspR9I | CCNGG | 2 cut(s) | 23, 162 |
| MunI | CAATTG | 1 cut(s) | 245 |
| MvaI | CCWGG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 152, 226 |
| NciI | CCSGG | 1 cut(s) | 162 |
| NlaIII | CATG | 1 cut(s) | 61 |
| PasI | CCCWGGG | 1 cut(s) | 22 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 115 |
| PfeI | GAWTC | 3 cut(s) | 106, 115, 265 |
| PinAI | ACCGGT | 1 cut(s) | 189 |
| Psp6I | CCWGG | 1 cut(s) | 21 |
| PspGI | CCWGG | 1 cut(s) | 21 |
| PspPI | GGNCC | 1 cut(s) | 195 |
| SaqAI | TTAA | 1 cut(s) | 63 |
| Sau96I | GGNCC | 1 cut(s) | 195 |
| ScrFI | CCNGG | 2 cut(s) | 23, 162 |
| SetI | ASST | 4 cut(s) | 37, 124, 200, 222 |
| SfaNI | GCATC | 2 cut(s) | 133, 164 |
| SinI | GGWCC | 1 cut(s) | 195 |
| SmlI | CTYRAG | 1 cut(s) | 36 |
| SmoI | CTYRAG | 1 cut(s) | 36 |
| Sse9I | AATT | 2 cut(s) | 238, 245 |
| StyD4I | CCNGG | 2 cut(s) | 21, 160 |
| TaqI | TCGA | 2 cut(s) | 118, 138 |
| TasI | AATT | 2 cut(s) | 238, 245 |
| TfiI | GAWTC | 3 cut(s) | 106, 115, 265 |
| Tru1I | TTAA | 1 cut(s) | 63 |
| Tru9I | TTAA | 1 cut(s) | 63 |
| VpaK11BI | GGWCC | 1 cut(s) | 195 |