EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0030641 |
| rosa_multiflora | Rmu_co8427705.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00123230 |
| rosa_rugosa | Rorug05G0119000 |
| rosa_samantha | Rh5BG210300 Rh5CG234000 Rh5DG215300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 233, 236, 399 |
| AcoI | YGGCCR | 1 cut(s) | 209 |
| AcsI | RAATTY | 1 cut(s) | 544 |
| AfaI | GTAC | 1 cut(s) | 397 |
| AgeI | ACCGGT | 1 cut(s) | 145 |
| AgsI | TTSAA | 2 cut(s) | 38, 342 |
| AluBI | AGCT | 4 cut(s) | 387, 460, 536, 575 |
| AluI | AGCT | 4 cut(s) | 387, 460, 536, 575 |
| AoxI | GGCC | 4 cut(s) | 15, 140, 165, 209 |
| ApeKI | GCWGC | 1 cut(s) | 533 |
| ApoI | RAATTY | 1 cut(s) | 544 |
| AsiGI | ACCGGT | 1 cut(s) | 145 |
| AspS9I | GGNCC | 1 cut(s) | 140 |
| AsuC2I | CCSGG | 1 cut(s) | 424 |
| AsuHPI | GGTGA | 1 cut(s) | 173 |
| BbvI | GCAGC | 1 cut(s) | 545 |
| BccI | CCATC | 3 cut(s) | 65, 325, 510 |
| BceAI | ACGGC | 1 cut(s) | 152 |
| BcnI | CCSGG | 1 cut(s) | 424 |
| BfaI | CTAG | 2 cut(s) | 203, 356 |
| BisI | GCNGC | 2 cut(s) | 234, 534 |
| BlsI | GCNGC | 2 cut(s) | 235, 535 |
| Bme1390I | CCNGG | 1 cut(s) | 424 |
| BmgT120I | GGNCC | 1 cut(s) | 140 |
| BmiI | GGNNCC | 1 cut(s) | 439 |
| BmrFI | CCNGG | 1 cut(s) | 424 |
| BmsI | GCATC | 1 cut(s) | 481 |
| BpmI | CTGGAG | 1 cut(s) | 263 |
| BpuMI | CCSGG | 1 cut(s) | 424 |
| BsaJI | CCNNGG | 3 cut(s) | 12, 168, 183 |
| BsaWI | WCCGGW | 1 cut(s) | 145 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 241, 271, 564, 594 |
| Bse118I | RCCGGY | 1 cut(s) | 145 |
| BseDI | CCNNGG | 3 cut(s) | 12, 168, 183 |
| BseGI | GGATG | 1 cut(s) | 106 |
| BseXI | GCAGC | 1 cut(s) | 545 |
| BshFI | GGCC | 4 cut(s) | 17, 142, 167, 211 |
| BshTI | ACCGGT | 1 cut(s) | 145 |
| BsiSI | CCGG | 2 cut(s) | 146, 423 |
| BsnI | GGCC | 4 cut(s) | 17, 142, 167, 211 |
| BspACI | CCGC | 3 cut(s) | 233, 236, 399 |
| BspANI | GGCC | 4 cut(s) | 17, 142, 167, 211 |
| BspLI | GGNNCC | 1 cut(s) | 439 |
| BsrFI | RCCGGY | 1 cut(s) | 145 |
| BssAI | RCCGGY | 1 cut(s) | 145 |
| BssECI | CCNNGG | 3 cut(s) | 12, 168, 183 |
| BssT1I | CCWWGG | 1 cut(s) | 12 |
| Bst4CI | ACNGT | 2 cut(s) | 85, 272 |
| BstDEI | CTNAG | 1 cut(s) | 456 |
| BstDSI | CCRYGG | 2 cut(s) | 168, 183 |
| BstEII | GGTNACC | 1 cut(s) | 148 |
| BstF5I | GGATG | 1 cut(s) | 106 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 173, 208 |
| BstPI | GGTNACC | 1 cut(s) | 148 |
| BstSCI | CCNGG | 1 cut(s) | 422 |
| BstV1I | GCAGC | 1 cut(s) | 545 |
| BsuRI | GGCC | 4 cut(s) | 17, 142, 167, 211 |
| BtgI | CCRYGG | 2 cut(s) | 168, 183 |
| BtsCI | GGATG | 1 cut(s) | 106 |
| Cfr10I | RCCGGY | 1 cut(s) | 145 |
| Cfr13I | GGNCC | 1 cut(s) | 140 |
| Csp6I | GTAC | 1 cut(s) | 396 |
| CspAI | ACCGGT | 1 cut(s) | 145 |
| CviQI | GTAC | 1 cut(s) | 396 |
| DdeI | CTNAG | 1 cut(s) | 456 |
| EaeI | YGGCCR | 1 cut(s) | 209 |
| Eco130I | CCWWGG | 1 cut(s) | 12 |
| Eco91I | GGTNACC | 1 cut(s) | 148 |
| EcoO65I | GGTNACC | 1 cut(s) | 148 |
| EcoT14I | CCWWGG | 1 cut(s) | 12 |
| ErhI | CCWWGG | 1 cut(s) | 12 |
| FaiI | YATR | 4 cut(s) | 483, 594, 596, 604 |
| Fnu4HI | GCNGC | 2 cut(s) | 234, 534 |
| FokI | GGATG | 1 cut(s) | 113 |
| Fsp4HI | GCNGC | 2 cut(s) | 234, 534 |
| FspBI | CTAG | 2 cut(s) | 203, 356 |
| GluI | GCNGC | 2 cut(s) | 234, 534 |
| GsuI | CTGGAG | 1 cut(s) | 263 |
| HaeIII | GGCC | 4 cut(s) | 17, 142, 167, 211 |
| HapII | CCGG | 2 cut(s) | 146, 423 |
| HincII | GTYRAC | 1 cut(s) | 64 |
| HindII | GTYRAC | 1 cut(s) | 64 |
| HinfI | GANTC | 3 cut(s) | 106, 367, 427 |
| HpaI | GTTAAC | 1 cut(s) | 64 |
| HpaII | CCGG | 2 cut(s) | 146, 423 |
| HphI | GGTGA | 1 cut(s) | 173 |
| Hpy166II | GTNNAC | 2 cut(s) | 64, 396 |
| Hpy188I | TCNGA | 2 cut(s) | 111, 261 |
| Hpy188III | TCNNGA | 1 cut(s) | 371 |
| Hpy8I | GTNNAC | 2 cut(s) | 64, 396 |
| HpyAV | CCTTC | 1 cut(s) | 563 |
| HpyCH4III | ACNGT | 2 cut(s) | 85, 272 |
| HpyCH4V | TGCA | 2 cut(s) | 176, 533 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 173, 208 |
| HpyF3I | CTNAG | 1 cut(s) | 456 |
| KspAI | GTTAAC | 1 cut(s) | 64 |
| LmnI | GCTCC | 1 cut(s) | 572 |
| LpnPI | CCDG | 5 cut(s) | 159, 227, 341, 399, 436 |
| Lsp1109I | GCAGC | 1 cut(s) | 545 |
| LweI | GCATC | 1 cut(s) | 481 |
| MaeI | CTAG | 2 cut(s) | 203, 356 |
| MaeIII | GTNAC | 3 cut(s) | 148, 190, 380 |
| MboII | GAAGA | 1 cut(s) | 500 |
| MluCI | AATT | 2 cut(s) | 342, 544 |
| MmeI | TCCRAC | 1 cut(s) | 239 |
| MnlI | CCTC | 6 cut(s) | 28, 91, 113, 157, 238, 302 |
| MseI | TTAA | 2 cut(s) | 63, 516 |
| MspI | CCGG | 2 cut(s) | 146, 423 |
| MspR9I | CCNGG | 1 cut(s) | 424 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 173, 208 |
| NciI | CCSGG | 1 cut(s) | 424 |
| NlaIV | GGNNCC | 1 cut(s) | 439 |
| NmeAIII | GCCGAG | 2 cut(s) | 237, 427 |
| NmuCI | GTSAC | 2 cut(s) | 190, 380 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 115, 165 |
| PfeI | GAWTC | 3 cut(s) | 106, 367, 427 |
| PfoI | TCCNGGA | 1 cut(s) | 422 |
| PinAI | ACCGGT | 1 cut(s) | 145 |
| PkrI | GCNGC | 2 cut(s) | 235, 535 |
| PspEI | GGTNACC | 1 cut(s) | 148 |
| PspN4I | GGNNCC | 1 cut(s) | 439 |
| PspPI | GGNCC | 1 cut(s) | 140 |
| RsaI | GTAC | 1 cut(s) | 397 |
| RsaNI | GTAC | 1 cut(s) | 396 |
| SaqAI | TTAA | 2 cut(s) | 63, 516 |
| SatI | GCNGC | 2 cut(s) | 234, 534 |
| Sau96I | GGNCC | 1 cut(s) | 140 |
| ScrFI | CCNGG | 1 cut(s) | 424 |
| SetI | ASST | 9 cut(s) | 14, 124, 389, 418, 462, 471, 523, 538, 577 |
| SfaNI | GCATC | 1 cut(s) | 481 |
| Sse9I | AATT | 2 cut(s) | 342, 544 |
| SsiI | CCGC | 3 cut(s) | 233, 236, 399 |
| SspMI | CTAG | 2 cut(s) | 203, 356 |
| StyD4I | CCNGG | 1 cut(s) | 422 |
| StyI | CCWWGG | 1 cut(s) | 12 |
| TaaI | ACNGT | 2 cut(s) | 85, 272 |
| TaqI | TCGA | 4 cut(s) | 8, 118, 370, 511 |
| TasI | AATT | 2 cut(s) | 342, 544 |
| TauI | GCSGC | 1 cut(s) | 236 |
| TfiI | GAWTC | 3 cut(s) | 106, 367, 427 |
| Tru1I | TTAA | 2 cut(s) | 63, 516 |
| Tru9I | TTAA | 2 cut(s) | 63, 516 |
| TseFI | GTSAC | 2 cut(s) | 190, 380 |
| TseI | GCWGC | 1 cut(s) | 533 |
| Tsp45I | GTSAC | 2 cut(s) | 190, 380 |
| TspDTI | ATGAA | 1 cut(s) | 501 |
| TspGWI | ACGGA | 1 cut(s) | 420 |
| XapI | RAATTY | 1 cut(s) | 544 |
| XspI | CTAG | 2 cut(s) | 203, 356 |