RchiOBHm_Chr5g0054501

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
57130794 .. 57131054
261 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 261 bp
ATGCACCAACTGGTCGGTTCTCTGCCCCATCACATATTGAGAAATTTGGCTAACATCTATGGACCCCTTATGCACTTGCAACTAGGTGAAGTTTCCACTGTTGTTGACTCCACACCAGAAGCTGCCAAAGAGATTATGAGAGCTCACGACAACTTCTATTCTTTAATTCTGGCCACTCCTGCTTGCTCCAGATATCATCTCTTATGGCGGTGCAGGCATTGTCTTTGGCTCTTTGCACCATATGGAGAATACTGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

86

Amino Acids

10.03

Weight (kDa)

7.83

Isoelectric Point (pI)

70.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022475)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 208
AcoI YGGCCR 1 cut(s) 171
AcsI RAATTY 1 cut(s) 43
AluBI AGCT 2 cut(s) 122, 143
AluI AGCT 2 cut(s) 122, 143
Alw21I GWGCWC 1 cut(s) 145
AlwNI CAGNNNCTG 1 cut(s) 122
AoxI GGCC 1 cut(s) 171
ApeKI GCWGC 1 cut(s) 122
ApoI RAATTY 1 cut(s) 43
AspS9I GGNCC 1 cut(s) 62
AsuHPI GGTGA 1 cut(s) 98
AvaII GGWCC 1 cut(s) 62
BalI TGGCCA 1 cut(s) 173
BanII GRGCYC 1 cut(s) 145
Bbv12I GWGCWC 1 cut(s) 145
BbvI GCAGC 1 cut(s) 109
BccI CCATC 1 cut(s) 36
BfaI CTAG 1 cut(s) 83
BisI GCNGC 1 cut(s) 123
BlsI GCNGC 1 cut(s) 124
Bme18I GGWCC 1 cut(s) 62
BmgT120I GGNCC 1 cut(s) 62
BmiI GGNNCC 1 cut(s) 64
BpmI CTGGAG 1 cut(s) 172
Bse1I ACTGG 2 cut(s) 15, 257
BseNI ACTGG 2 cut(s) 15, 257
BseXI GCAGC 1 cut(s) 109
BsgI GTGCAG 1 cut(s) 232
BshFI GGCC 1 cut(s) 173
BsiHKAI GWGCWC 1 cut(s) 145
BsnI GGCC 1 cut(s) 173
Bsp1286I GDGCHC 1 cut(s) 145
BspACI CCGC 1 cut(s) 208
BspANI GGCC 1 cut(s) 173
BspLI GGNNCC 1 cut(s) 64
BsrI ACTGG 2 cut(s) 15, 257
Bst4CI ACNGT 1 cut(s) 100
BstC8I GCNNGC 2 cut(s) 184, 215
BstMWI GCNNNNNNNGC 2 cut(s) 179, 214
BstV1I GCAGC 1 cut(s) 109
BsuRI GGCC 1 cut(s) 173
BtsIMutI CAGTG 1 cut(s) 96
Cac8I GCNNGC 2 cut(s) 184, 215
CaiI CAGNNNCTG 1 cut(s) 122
Cfr13I GGNCC 1 cut(s) 62
CspCI CAANNNNNGTGG 2 cut(s) 85, 120
CviJI RGCY 5 cut(s) 50, 122, 143, 173, 229
CviKI_1 RGCY 5 cut(s) 50, 122, 143, 173, 229
EaeI YGGCCR 1 cut(s) 171
Ecl136II GAGCTC 1 cut(s) 143
Eco24I GRGCYC 1 cut(s) 145
Eco32I GATATC 1 cut(s) 194
Eco47I GGWCC 1 cut(s) 62
Eco53kI GAGCTC 1 cut(s) 143
EcoICRI GAGCTC 1 cut(s) 143
EcoRV GATATC 1 cut(s) 194
EcoT38I GRGCYC 1 cut(s) 145
FaiI YATR 7 cut(s) 35, 60, 71, 137, 205, 241, 243
FauNDI CATATG 1 cut(s) 241
Fnu4HI GCNGC 1 cut(s) 123
FriOI GRGCYC 1 cut(s) 145
Fsp4HI GCNGC 1 cut(s) 123
FspBI CTAG 1 cut(s) 83
GluI GCNGC 1 cut(s) 123
GsuI CTGGAG 1 cut(s) 172
HaeIII GGCC 1 cut(s) 173
HincII GTYRAC 1 cut(s) 106
HindII GTYRAC 1 cut(s) 106
HinfI GANTC 1 cut(s) 107
HphI GGTGA 1 cut(s) 98
Hpy166II GTNNAC 1 cut(s) 106
Hpy188III TCNNGA 2 cut(s) 146, 189
Hpy8I GTNNAC 1 cut(s) 106
HpyCH4III ACNGT 1 cut(s) 100
HpyCH4V TGCA 5 cut(s) 4, 73, 79, 213, 236
HpyF10VI GCNNNNNNNGC 2 cut(s) 179, 214
LmnI GCTCC 1 cut(s) 191
LpnPI CCDG 6 cut(s) 129, 155, 192, 199, 202, 238
Lsp1109I GCAGC 1 cut(s) 109
MaeI CTAG 1 cut(s) 83
MhlI GDGCHC 1 cut(s) 145
MlsI TGGCCA 1 cut(s) 173
MluCI AATT 2 cut(s) 43, 165
MluNI TGGCCA 1 cut(s) 173
MlyI GAGTC 1 cut(s) 101
Mox20I TGGCCA 1 cut(s) 173
MscI TGGCCA 1 cut(s) 173
MseI TTAA 1 cut(s) 164
Msp20I TGGCCA 1 cut(s) 173
MwoI GCNNNNNNNGC 2 cut(s) 179, 214
NdeI CATATG 1 cut(s) 241
NlaIV GGNNCC 1 cut(s) 64
PkrI GCNGC 1 cut(s) 124
PleI GAGTC 1 cut(s) 101
PpsI GAGTC 1 cut(s) 101
Psp124BI GAGCTC 1 cut(s) 145
PspN4I GGNNCC 1 cut(s) 64
PspPI GGNCC 1 cut(s) 62
PstNI CAGNNNCTG 1 cut(s) 122
SacI GAGCTC 1 cut(s) 145
SaqAI TTAA 1 cut(s) 164
SatI GCNGC 1 cut(s) 123
Sau96I GGNCC 1 cut(s) 62
SchI GAGTC 1 cut(s) 101
SduI GDGCHC 1 cut(s) 145
SetI ASST 3 cut(s) 88, 124, 145
SinI GGWCC 1 cut(s) 62
Sse9I AATT 2 cut(s) 43, 165
SsiI CCGC 1 cut(s) 208
SspMI CTAG 1 cut(s) 83
SstI GAGCTC 1 cut(s) 145
TaaI ACNGT 1 cut(s) 100
TasI AATT 2 cut(s) 43, 165
Tru1I TTAA 1 cut(s) 164
Tru9I TTAA 1 cut(s) 164
TscAI CASTG 1 cut(s) 103
TseI GCWGC 1 cut(s) 122
TspRI CASTG 1 cut(s) 103
VpaK11BI GGWCC 1 cut(s) 62
XapI RAATTY 1 cut(s) 43
XspI CTAG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.