Basic Information
Type: gene
Physical Location & Seq
Forward (+)
38968398 .. 38968595
N/A
Length: 198 bp
ATGGACATGGCTTTTTTGAGTATCTCCTTCATCTTAACTCTCTTATGCCTTGTGGGTTATCAGCTTTTGTGCCTAATGGACCTCGAGGACGATTACATCAACTCATATGATTCATCATCTCGGATAAACCGTACTGTTTTGCCAGAGTTTATCGTTCAAGGAGTTTTCTGCGTCATTCTTTTTATAACGAGACATTGA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
4.32
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| Cornichon |
PF03311 |
7 - 65 |
7.5e-17 |
Cornichon protein |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0020526)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AanI |
TTATAA |
1 cut(s)
|
185 |
| AbsI |
CCTCGAGG |
1 cut(s)
|
83 |
| AfaI |
GTAC |
1 cut(s)
|
133 |
| AgsI |
TTSAA |
1 cut(s)
|
158 |
| AluBI |
AGCT |
1 cut(s)
|
64 |
| AluI |
AGCT |
1 cut(s)
|
64 |
| Alw26I |
GTCTC |
1 cut(s)
|
184 |
| Ama87I |
CYCGRG |
1 cut(s)
|
83 |
| AspS9I |
GGNCC |
1 cut(s)
|
79 |
| AvaI |
CYCGRG |
1 cut(s)
|
83 |
| AvaII |
GGWCC |
1 cut(s)
|
79 |
| BcoDI |
GTCTC |
1 cut(s)
|
184 |
| Bme18I |
GGWCC |
1 cut(s)
|
79 |
| BmeT110I |
CYCGRG |
1 cut(s)
|
83 |
| BmgT120I |
GGNCC |
1 cut(s)
|
79 |
| BsiHKCI |
CYCGRG |
1 cut(s)
|
83 |
| BsmAI |
GTCTC |
1 cut(s)
|
184 |
| BsoBI |
CYCGRG |
1 cut(s)
|
83 |
| Bst4CI |
ACNGT |
2 cut(s)
|
131, 136 |
| BstMAI |
GTCTC |
1 cut(s)
|
184 |
| Cfr13I |
GGNCC |
1 cut(s)
|
79 |
| CseI |
GACGC |
1 cut(s)
|
160 |
| Csp6I |
GTAC |
1 cut(s)
|
132 |
| CviAII |
CATG |
1 cut(s)
|
7 |
| CviJI |
RGCY |
2 cut(s)
|
11, 64 |
| CviKI_1 |
RGCY |
2 cut(s)
|
11, 64 |
| CviQI |
GTAC |
1 cut(s)
|
132 |
| Eco47I |
GGWCC |
1 cut(s)
|
79 |
| Eco88I |
CYCGRG |
1 cut(s)
|
83 |
| FaeI |
CATG |
1 cut(s)
|
10 |
| FaiI |
YATR |
5 cut(s)
|
8, 46, 106, 108, 185 |
| FatI |
CATG |
1 cut(s)
|
6 |
| FauNDI |
CATATG |
1 cut(s)
|
106 |
| HgaI |
GACGC |
1 cut(s)
|
160 |
| Hin1II |
CATG |
1 cut(s)
|
10 |
| HinfI |
GANTC |
1 cut(s)
|
110 |
| Hpy188I |
TCNGA |
1 cut(s)
|
123 |
| HpyAV |
CCTTC |
1 cut(s)
|
37 |
| HpyCH4III |
ACNGT |
2 cut(s)
|
131, 136 |
| Hsp92II |
CATG |
1 cut(s)
|
10 |
| LpnPI |
CCDG |
1 cut(s)
|
156 |
| MnlI |
CCTC |
2 cut(s)
|
79, 92 |
| MseI |
TTAA |
1 cut(s)
|
35 |
| NdeI |
CATATG |
1 cut(s)
|
106 |
| NlaIII |
CATG |
1 cut(s)
|
10 |
| PaeR7I |
CTCGAG |
1 cut(s)
|
83 |
| PcsI |
WCGNNNNNNNCGW |
1 cut(s)
|
127 |
| PfeI |
GAWTC |
1 cut(s)
|
110 |
| PsiI |
TTATAA |
1 cut(s)
|
185 |
| PspPI |
GGNCC |
1 cut(s)
|
79 |
| PspXI |
VCTCGAGB |
1 cut(s)
|
83 |
| RsaI |
GTAC |
1 cut(s)
|
133 |
| RsaNI |
GTAC |
1 cut(s)
|
132 |
| SaqAI |
TTAA |
1 cut(s)
|
35 |
| Sau96I |
GGNCC |
1 cut(s)
|
79 |
| SetI |
ASST |
2 cut(s)
|
66, 84 |
| Sfr274I |
CTCGAG |
1 cut(s)
|
83 |
| SgeI |
CNNG |
7 cut(s)
|
19, 62, 95, 97, 132, 155, 170 |
| SinI |
GGWCC |
1 cut(s)
|
79 |
| SlaI |
CTCGAG |
1 cut(s)
|
83 |
| SmlI |
CTYRAG |
1 cut(s)
|
83 |
| SmoI |
CTYRAG |
1 cut(s)
|
83 |
| TaaI |
ACNGT |
2 cut(s)
|
131, 136 |
| TaqI |
TCGA |
1 cut(s)
|
84 |
| TfiI |
GAWTC |
1 cut(s)
|
110 |
| Tru1I |
TTAA |
1 cut(s)
|
35 |
| Tru9I |
TTAA |
1 cut(s)
|
35 |
| TspDTI |
ATGAA |
2 cut(s)
|
19, 102 |
| VpaK11BI |
GGWCC |
1 cut(s)
|
79 |
| XhoI |
CTCGAG |
1 cut(s)
|
83 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.