RchiOBHm_Chr2g0103381

Vitamin B6 photo-protection and homoeostasis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0014372
Physical Location & Seq
Reverse (-)
14957208 .. 14960417
3210 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1728 bp
ATGATGGTGTCATTCAGTGGTGCTCATTCAGTACAAACCGCTTCTTCTACTTCCAAACCCCTAAACCCTGAACCTCTCACTATTAAGGCGCCAAAATTAGACCCCCCTTCCTCTCAAAACCCTAATTTTCCCACAGTTCCAATTCTCATGCAATCATCTTTCTATGCAGCCTCCAACTCCCACCACTTCCTCCTCTCATGGAAAACCCCACAACCCCAATTCACACCCCGCAAGCCACTCCCCAGGAAGCTCCGTACCACCTTCAAAGCCCCAACCTTTACCAACTCCCTCAGAACCTCAATTGGGTACGAGCCGGAAGAAGGCCTCGGAGAAGACCCGGGTCCTTCAACGCCGCCGGGTCGGCTCCCGGTGGTGATTCGGAAGTCGGGTCGGGTTTCCCGGTACTTCTGGGATGGGGATTGCTTGCAATTAGTCGGTGTTGATGGCCGTGCGGCGTCGTTTGGTTTGGATTTGGACGATGGGTTTCGGAAATTTTATAGAGTCTGTAGTTGTGCTGTGTGGGATTTCTTTATTCCCAAGCAAGTTAGTGGGAATTATATGAGCTATGTGAAATGGAAGTTCTTGCACCGCGTTTTTAGCTCTGCGCTGCAGGTTCTTGCTACTCAGGCAATGTTTCGGGCCATTGGGATTGGGTACTCTCGTTCGCTTCCAGCGGCTGCTGCTCTTAACTGGGTCTTGAAGGATGGACTTGGACGGCTGAGTAGGTGCATCTATACTGCTAGTCTAGCGTCTGCTTTTGATACCAATTTGAAGAGAGTTCGGTTTTCAACCTCTGTTCTGTTCACGTTGAGTATTGGAGTTGAGCTGTTGACACCTGCATATCCTCAGTATTTCCTGCTTCTTGCGTCTTTAGCCAACGTTGCAAAACAAATAAGCTTGGCTTGCTATATAGCAACTAGTTCTGCTGTTCATAGAAGCTTTGCAATAGCAGATAATCTTGGTGAACTTTCGGCAAAGGCACAGATTCAAACAGTGTGCTTTGATAACCTTGGCCTTTTGCTTGCTGCATTATTGAATATGTTGTTGAAGAACAACCAAAGGTTGCGGACAGGCTTGCCCTTTGTTGTATACCCCATCTTCTCAGCACTTGACCTTTGTGGAATATATCAAGGGCTTAAACATGTCCATTTACAAACATTAAGTAAGGATAGACTTGAAATTGTGCTAAATACTTGGATCAAGTTAGGTAAAGTTCCTTCACCTGCAGAAGTGAGTAAAGAAGAAGGAATCGATTTCCTGCAGAGCAAAGACAAAGGATTATGGCCCATCAGAATAGGGTACTTGGATCCAAAGAATCAAATCCCCAAGTTATCCATGATGGCGATGAGATCTACTAGTGATGATGATTATTACTTCATATCCATGGAGACATTTTATACAAGAAAACGAAGAACTAAGCAACATGGAATTCTTCTTTGTCTACGGGAAAGAGCCAGCACTACAGATATTATCAAGGGTCTGTTGCAGGCATGCTATATCCGCAAAGTCCTGCTTATGGACGAGAATAGGTGGGCGGACAAGGTAGATGCTAGAGATGCATTAGACTCGGCTCTAAAAGAATGGCCAAAATTGATTGATGAGTGCAAACGGCGTGCACAGGGCGATATGTACCTGTTGAATGAACAAATGGTGGCCCGGGGTTGGGCTACTAAGAATATCTTACTGAGTGCACAAGAGCAGACTCGATATAGTTTTGTAGATGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF647

Protein Analysis

575

Amino Acids

64.55

Weight (kDa)

9.5

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UVB_sens_prot PF04884 175 - 401 1.9e-63 Vitamin B6 photo-protection and homoeostasis domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014372)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23470
fragaria_vesca FvH4_1g14600 FvH4_1g14600 FvH4_1g14600
malus_domestica MD02G1159600.v1.1
prunus_persica Prupe.7G144300_v2.0.a1
pyrus_communis pycom02g12590
rosa_chinensis RchiOBHm_Chr2g0103381
rosa_laevigata RLG00000017232
rosa_multiflora Rmu_sc0002434.1_g000009
rosa_roxburghii Rroxscaffold_2G00139670
rosa_rugosa Rorug02G0114700
rosa_samantha Rh2AG162800 Rh2BG169900 Rh2CG170000 Rh2DG168900
rosa_wichuraiana Rw2G012790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 844, 1231
Acc36I ACCTGC 3 cut(s) 601, 844, 1231
AccB1I GGYRCC 1 cut(s) 88
AccI GTMKAC 2 cut(s) 1089, 1441
AccII CGCG 1 cut(s) 591
AciI CCGC 9 cut(s) 39, 229, 353, 452, 589, 674, 1066, 1501, 1535
AclI AACGTT 1 cut(s) 879
AclWI GGATC 3 cut(s) 1205, 1301, 1314
AcoI YGGCCR 2 cut(s) 445, 1583
AcsI RAATTY 2 cut(s) 491, 1428
AcyI GRCGYC 2 cut(s) 89, 455
AfaI GTAC 7 cut(s) 33, 256, 308, 404, 656, 1301, 1631
AfiI CCNNNNNNNGG 5 cut(s) 303, 320, 1516, 1662, 1663
AflIII ACRYGT 1 cut(s) 1141
AhlI ACTAGT 2 cut(s) 917, 1355
AjnI CCWGG 1 cut(s) 242
AluBI AGCT 6 cut(s) 250, 564, 600, 826, 897, 939
AluI AGCT 6 cut(s) 250, 564, 600, 826, 897, 939
Alw21I GWGCWC 3 cut(s) 25, 1618, 1693
Alw26I GTCTC 1 cut(s) 1382
Alw44I GTGCAC 2 cut(s) 1614, 1689
AlwI GGATC 3 cut(s) 1205, 1301, 1314
AlwNI CAGNNNCTG 1 cut(s) 677
Ama87I CYCGRG 2 cut(s) 337, 1656
AoxI GGCC 7 cut(s) 322, 445, 639, 1012, 1283, 1583, 1653
ApaLI GTGCAC 2 cut(s) 1614, 1689
ApeKI GCWGC 5 cut(s) 167, 607, 677, 680, 1025
ApoI RAATTY 2 cut(s) 491, 1428
AspLEI GCGC 2 cut(s) 91, 607
AspS9I GGNCC 4 cut(s) 341, 639, 1284, 1654
AsuC2I CCSGG 7 cut(s) 338, 339, 357, 368, 400, 1657, 1658
AsuHPI GGTGA 3 cut(s) 385, 974, 1212
AvaI CYCGRG 2 cut(s) 337, 1656
AvaII GGWCC 1 cut(s) 341
BaeGI GKGCMC 2 cut(s) 1618, 1693
BaeI ACNNNNGTAYC 2 cut(s) 646, 679
BalI TGGCCA 1 cut(s) 1585
BamHI GGATCC 1 cut(s) 1306
BanI GGYRCC 1 cut(s) 88
BarI GAAGNNNNNNTAC 2 cut(s) 1201, 1233
BbsI GAAGAC 1 cut(s) 339
Bbv12I GWGCWC 3 cut(s) 25, 1618, 1693
BbvI GCAGC 5 cut(s) 179, 594, 664, 667, 1012
BccI CCATC 7 cut(s) 407, 437, 473, 698, 1103, 1295, 1333
BceAI ACGGC 3 cut(s) 432, 731, 1625
BcgI CGANNNNNNTGC 2 cut(s) 1548, 1582
BciT130I CCWGG 1 cut(s) 244
BcnI CCSGG 7 cut(s) 338, 339, 357, 368, 400, 1657, 1658
BcoDI GTCTC 1 cut(s) 1382
BcuI ACTAGT 2 cut(s) 917, 1355
BfaI CTAG 5 cut(s) 741, 746, 918, 1356, 1551
BfmI CTRYAG 5 cut(s) 505, 608, 1224, 1259, 1461
BfoI RGCGCY 1 cut(s) 92
BfuAI ACCTGC 3 cut(s) 601, 844, 1231
BglI GCCNNNNNGGC 1 cut(s) 361
BglII AGATCT 1 cut(s) 1349
BisI GCNGC 8 cut(s) 168, 353, 453, 608, 675, 678, 681, 1026
BlsI GCNGC 8 cut(s) 169, 354, 454, 609, 676, 679, 682, 1027
Bme1390I CCNGG 8 cut(s) 244, 338, 339, 357, 368, 400, 1657, 1658
Bme18I GGWCC 1 cut(s) 341
BmeT110I CYCGRG 2 cut(s) 337, 1656
BmgT120I GGNCC 4 cut(s) 341, 639, 1284, 1654
BmiI GGNNCC 4 cut(s) 90, 342, 365, 1308
BmrFI CCNGG 8 cut(s) 244, 338, 339, 357, 368, 400, 1657, 1658
BmrI ACTGGG 1 cut(s) 700
BmsI GCATC 3 cut(s) 738, 1537, 1546
BmuI ACTGGG 1 cut(s) 700
BoxI GACNNNNGTC 1 cut(s) 339
BpiI GAAGAC 1 cut(s) 339
BpuMI CCSGG 7 cut(s) 338, 339, 357, 368, 400, 1657, 1658
Bsa29I ATCGAT 1 cut(s) 1251
BsaHI GRCGYC 2 cut(s) 89, 455
BsaJI CCNNGG 7 cut(s) 242, 325, 337, 1009, 1383, 1656, 1657
Bsc4I CCNNNNNNNGG 5 cut(s) 303, 320, 1516, 1662, 1663
Bse1I ACTGG 1 cut(s) 695
Bse3DI GCAATG 1 cut(s) 636
BseBI CCWGG 1 cut(s) 244
BseCI ATCGAT 1 cut(s) 1251
BseDI CCNNGG 7 cut(s) 242, 325, 337, 1009, 1383, 1656, 1657
BseGI GGATG 2 cut(s) 418, 709
BseLI CCNNNNNNNGG 5 cut(s) 303, 320, 1516, 1662, 1663
BseMI GCAATG 1 cut(s) 636
BseMII CTCAG 6 cut(s) 304, 638, 710, 860, 1116, 1676
BseNI ACTGG 1 cut(s) 695
BseRI GAGGAG 1 cut(s) 182
BseSI GKGCMC 2 cut(s) 1618, 1693
BseXI GCAGC 5 cut(s) 179, 594, 664, 667, 1012
Bsh1236I CGCG 1 cut(s) 591
BshFI GGCC 7 cut(s) 324, 447, 641, 1014, 1285, 1585, 1655
BshNI GGYRCC 1 cut(s) 88
BshVI ATCGAT 1 cut(s) 1251
BsiHKAI GWGCWC 3 cut(s) 25, 1618, 1693
BsiHKCI CYCGRG 2 cut(s) 337, 1656
BsiSI CCGG 6 cut(s) 314, 338, 356, 368, 400, 1657
BslI CCNNNNNNNGG 5 cut(s) 303, 320, 1516, 1662, 1663
BsmAI GTCTC 1 cut(s) 1382
BsnI GGCC 7 cut(s) 324, 447, 641, 1014, 1285, 1585, 1655
BsoBI CYCGRG 2 cut(s) 337, 1656
Bsp1286I GDGCHC 3 cut(s) 25, 1618, 1693
Bsp143I GATC 3 cut(s) 1197, 1306, 1349
Bsp19I CCATGG 1 cut(s) 1383
BspACI CCGC 9 cut(s) 39, 229, 353, 452, 589, 674, 1066, 1501, 1535
BspANI GGCC 7 cut(s) 324, 447, 641, 1014, 1285, 1585, 1655
BspCNI CTCAG 6 cut(s) 303, 637, 711, 859, 1115, 1677
BspDI ATCGAT 1 cut(s) 1251
BspFNI CGCG 1 cut(s) 591
BspLI GGNNCC 4 cut(s) 90, 342, 365, 1308
BspMAI CTGCAG 3 cut(s) 612, 1228, 1263
BspMI ACCTGC 3 cut(s) 601, 844, 1231
BspPI GGATC 3 cut(s) 1205, 1301, 1314
BspT107I GGYRCC 1 cut(s) 88
BsrDI GCAATG 1 cut(s) 636
BsrI ACTGG 1 cut(s) 695
BssECI CCNNGG 7 cut(s) 242, 325, 337, 1009, 1383, 1656, 1657
BssMI GATC 3 cut(s) 1197, 1306, 1349
BssNAI GTATAC 1 cut(s) 1090
BssNI GRCGYC 2 cut(s) 89, 455
BssT1I CCWWGG 2 cut(s) 1009, 1383
Bst1107I GTATAC 1 cut(s) 1090
Bst2UI CCWGG 1 cut(s) 244
Bst4CI ACNGT 2 cut(s) 136, 994
Bst6I CTCTTC 1 cut(s) 767
BstACI GRCGYC 2 cut(s) 89, 455
BstC8I GCNNGC 9 cut(s) 233, 425, 904, 1023, 1076, 1456, 1488, 1492, 1614
BstDEI CTNAG 8 cut(s) 290, 624, 719, 846, 1102, 1416, 1671, 1685
BstDSI CCRYGG 1 cut(s) 1383
BstF5I GGATG 2 cut(s) 418, 709
BstFNI CGCG 1 cut(s) 591
BstH2I RGCGCY 1 cut(s) 92
BstHHI GCGC 2 cut(s) 91, 607
BstKTI GATC 3 cut(s) 1200, 1309, 1352
BstMAI GTCTC 1 cut(s) 1382
BstMBI GATC 3 cut(s) 1197, 1306, 1349
BstNI CCWGG 1 cut(s) 244
BstNSI RCATGY 2 cut(s) 1145, 1494
BstPAI GACNNNNGTC 1 cut(s) 339
BstSCI CCNGG 8 cut(s) 242, 336, 337, 355, 366, 398, 1655, 1656
BstSFI CTRYAG 5 cut(s) 505, 608, 1224, 1259, 1461
BstSLI GKGCMC 2 cut(s) 1618, 1693
BstUI CGCG 1 cut(s) 591
BstV1I GCAGC 5 cut(s) 179, 594, 664, 667, 1012
BstV2I GAAGAC 1 cut(s) 339
BstX2I RGATCY 2 cut(s) 1306, 1349
BstYI RGATCY 2 cut(s) 1306, 1349
BstZ17I GTATAC 1 cut(s) 1090
Bsu15I ATCGAT 1 cut(s) 1251
BsuRI GGCC 7 cut(s) 324, 447, 641, 1014, 1285, 1585, 1655
BsuTUI ATCGAT 1 cut(s) 1251
BtgI CCRYGG 1 cut(s) 1383
BtgZI GCGATG 1 cut(s) 1358
BtsCI GGATG 2 cut(s) 418, 709
BtsIMutI CAGTG 2 cut(s) 22, 999
BveI ACCTGC 3 cut(s) 601, 844, 1231
Cac8I GCNNGC 9 cut(s) 233, 425, 904, 1023, 1076, 1456, 1488, 1492, 1614
CaiI CAGNNNCTG 1 cut(s) 677
CfoI GCGC 2 cut(s) 91, 607
Cfr13I GGNCC 4 cut(s) 341, 639, 1284, 1654
Cfr9I CCCGGG 2 cut(s) 337, 1656
ClaI ATCGAT 1 cut(s) 1251
CseI GACGC 3 cut(s) 444, 738, 855
Csp6I GTAC 7 cut(s) 32, 255, 307, 403, 655, 1300, 1630
CviAII CATG 7 cut(s) 148, 198, 1142, 1336, 1384, 1424, 1491
CviQI GTAC 7 cut(s) 32, 255, 307, 403, 655, 1300, 1630
DdeI CTNAG 8 cut(s) 290, 624, 719, 846, 1102, 1416, 1671, 1685
DinI GGCGCC 1 cut(s) 90
DpnI GATC 3 cut(s) 1199, 1308, 1351
DpnII GATC 3 cut(s) 1197, 1306, 1349
EaeI YGGCCR 2 cut(s) 445, 1583
Eam1104I CTCTTC 1 cut(s) 767
EarI CTCTTC 1 cut(s) 767
EciI GGCGGA 1 cut(s) 1550
Eco130I CCWWGG 2 cut(s) 1009, 1383
Eco147I AGGCCT 1 cut(s) 324
Eco47I GGWCC 1 cut(s) 341
Eco88I CYCGRG 2 cut(s) 337, 1656
EcoO109I RGGNCCY 1 cut(s) 341
EcoRI GAATTC 1 cut(s) 1428
EcoRII CCWGG 1 cut(s) 242
EcoT14I CCWWGG 2 cut(s) 1009, 1383
EcoT22I ATGCAT 1 cut(s) 1561
EgeI GGCGCC 1 cut(s) 90
EheI GGCGCC 1 cut(s) 90
ErhI CCWWGG 2 cut(s) 1009, 1383
FaeI CATG 7 cut(s) 151, 201, 1145, 1339, 1387, 1427, 1494
FalI AAGNNNNNCTT 6 cut(s) 886, 918, 1497, 1529, 1664, 1696
FatI CATG 7 cut(s) 147, 197, 1141, 1335, 1383, 1423, 1490
FauI CCCGC 1 cut(s) 236
FblI GTMKAC 2 cut(s) 1089, 1441
Fnu4HI GCNGC 8 cut(s) 168, 353, 453, 608, 675, 678, 681, 1026
FokI GGATG 2 cut(s) 425, 716
Fsp4HI GCNGC 8 cut(s) 168, 353, 453, 608, 675, 678, 681, 1026
FspBI CTAG 5 cut(s) 741, 746, 918, 1356, 1551
GlaI GCGC 2 cut(s) 90, 606
GluI GCNGC 8 cut(s) 168, 353, 453, 608, 675, 678, 681, 1026
HaeII RGCGCY 1 cut(s) 92
HaeIII GGCC 7 cut(s) 324, 447, 641, 1014, 1285, 1585, 1655
HapII CCGG 6 cut(s) 314, 338, 356, 368, 400, 1657
HgaI GACGC 3 cut(s) 444, 738, 855
HhaI GCGC 2 cut(s) 91, 607
Hin1I GRCGYC 2 cut(s) 89, 455
Hin1II CATG 7 cut(s) 151, 201, 1145, 1339, 1387, 1427, 1494
Hin6I GCGC 2 cut(s) 89, 605
HinP1I GCGC 2 cut(s) 89, 605
HincII GTYRAC 1 cut(s) 831
HindII GTYRAC 1 cut(s) 831
HindIII AAGCTT 2 cut(s) 895, 937
HinfI GANTC 7 cut(s) 376, 501, 985, 1248, 1315, 1565, 1702
HpaII CCGG 6 cut(s) 314, 338, 356, 368, 400, 1657
HphI GGTGA 3 cut(s) 385, 974, 1212
Hpy166II GTNNAC 7 cut(s) 804, 831, 965, 1090, 1442, 1616, 1691
Hpy188I TCNGA 5 cut(s) 293, 329, 381, 489, 1292
Hpy188III TCNNGA 1 cut(s) 697
Hpy8I GTNNAC 7 cut(s) 804, 831, 965, 1090, 1442, 1616, 1691
Hpy99I CGWCG 1 cut(s) 460
HpyAV CCTTC 7 cut(s) 117, 271, 314, 354, 694, 1227, 1238
HpyCH4III ACNGT 2 cut(s) 136, 994
HpyCH4IV ACGT 2 cut(s) 806, 879
HpyF3I CTNAG 8 cut(s) 290, 624, 719, 846, 1102, 1416, 1671, 1685
HpySE526I ACGT 2 cut(s) 806, 879
Hsp92I GRCGYC 2 cut(s) 89, 455
Hsp92II CATG 7 cut(s) 151, 201, 1145, 1339, 1387, 1427, 1494
HspAI GCGC 2 cut(s) 89, 605
KasI GGCGCC 1 cut(s) 88
Kzo9I GATC 3 cut(s) 1197, 1306, 1349
LmnI GCTCC 2 cut(s) 255, 369
Lsp1109I GCAGC 5 cut(s) 179, 594, 664, 667, 1012
LweI GCATC 3 cut(s) 738, 1537, 1546
MaeI CTAG 5 cut(s) 741, 746, 918, 1356, 1551
MaeII ACGT 2 cut(s) 806, 879
MalI GATC 3 cut(s) 1199, 1308, 1351
MboI GATC 3 cut(s) 1197, 1306, 1349
MboII GAAGA 9 cut(s) 36, 329, 344, 784, 1060, 1090, 1253, 1422, 1424
MfeI CAATTG 1 cut(s) 300
MflI RGATCY 2 cut(s) 1306, 1349
MhlI GDGCHC 3 cut(s) 25, 1618, 1693
MlsI TGGCCA 1 cut(s) 1585
MluNI TGGCCA 1 cut(s) 1585
Mly113I GGCGCC 1 cut(s) 89
MlyI GAGTC 3 cut(s) 510, 1559, 1696
MmeI TCCRAC 1 cut(s) 198
Mox20I TGGCCA 1 cut(s) 1585
Mph1103I ATGCAT 1 cut(s) 1561
MscI TGGCCA 1 cut(s) 1585
MseI TTAA 4 cut(s) 84, 687, 1137, 1160
MslI CAYNNNNRTG 1 cut(s) 1382
Msp20I TGGCCA 1 cut(s) 1585
MspA1I CMGCKG 1 cut(s) 674
MspI CCGG 6 cut(s) 314, 338, 356, 368, 400, 1657
MspR9I CCNGG 8 cut(s) 244, 338, 339, 357, 368, 400, 1657, 1658
MunI CAATTG 1 cut(s) 300
MvaI CCWGG 1 cut(s) 244
MvnI CGCG 1 cut(s) 591
NarI GGCGCC 1 cut(s) 89
NciI CCSGG 7 cut(s) 338, 339, 357, 368, 400, 1657, 1658
NcoI CCATGG 1 cut(s) 1383
NdeII GATC 3 cut(s) 1197, 1306, 1349
NlaIII CATG 7 cut(s) 151, 201, 1145, 1339, 1387, 1427, 1494
NlaIV GGNNCC 4 cut(s) 90, 342, 365, 1308
NmeAIII GCCGAG 1 cut(s) 1547
NsiI ATGCAT 1 cut(s) 1561
NspI RCATGY 2 cut(s) 1145, 1494
PaeI GCATGC 1 cut(s) 1494
PaqCI CACCTGC 2 cut(s) 844, 1231
PceI AGGCCT 1 cut(s) 324
PciI ACATGT 1 cut(s) 1141
PfeI GAWTC 4 cut(s) 376, 985, 1248, 1315
PkrI GCNGC 8 cut(s) 169, 354, 454, 609, 676, 679, 682, 1027
PleI GAGTC 3 cut(s) 509, 1559, 1696
PluTI GGCGCC 1 cut(s) 92
PpsI GAGTC 3 cut(s) 509, 1559, 1696
PpuMI RGGWCCY 1 cut(s) 341
PscI ACATGT 1 cut(s) 1141
PshAI GACNNNNGTC 1 cut(s) 339
Psp1406I AACGTT 1 cut(s) 879
Psp5II RGGWCCY 1 cut(s) 341
Psp6I CCWGG 1 cut(s) 242
PspGI CCWGG 1 cut(s) 242
PspN4I GGNNCC 4 cut(s) 90, 342, 365, 1308
PspPI GGNCC 4 cut(s) 341, 639, 1284, 1654
PspPPI RGGWCCY 1 cut(s) 341
PstI CTGCAG 3 cut(s) 612, 1228, 1263
PstNI CAGNNNCTG 1 cut(s) 677
PsuI RGATCY 2 cut(s) 1306, 1349
RsaI GTAC 7 cut(s) 33, 256, 308, 404, 656, 1301, 1631
RsaNI GTAC 7 cut(s) 32, 255, 307, 403, 655, 1300, 1630
RseI CAYNNNNRTG 1 cut(s) 1382
SaqAI TTAA 4 cut(s) 84, 687, 1137, 1160
SatI GCNGC 8 cut(s) 168, 353, 453, 608, 675, 678, 681, 1026
Sau3AI GATC 3 cut(s) 1197, 1306, 1349
Sau96I GGNCC 4 cut(s) 341, 639, 1284, 1654
SchI GAGTC 3 cut(s) 510, 1559, 1696
ScrFI CCNGG 8 cut(s) 244, 338, 339, 357, 368, 400, 1657, 1658
SduI GDGCHC 3 cut(s) 25, 1618, 1693
SfaNI GCATC 3 cut(s) 738, 1537, 1546
SfcI CTRYAG 5 cut(s) 505, 608, 1224, 1259, 1461
SfoI GGCGCC 1 cut(s) 90
SinI GGWCC 1 cut(s) 341
SmaI CCCGGG 2 cut(s) 339, 1658
SmiMI CAYNNNNRTG 1 cut(s) 1382
SpeI ACTAGT 2 cut(s) 917, 1355
SphI GCATGC 1 cut(s) 1494
SseBI AGGCCT 1 cut(s) 324
SsiI CCGC 9 cut(s) 39, 229, 353, 452, 589, 674, 1066, 1501, 1535
SspDI GGCGCC 1 cut(s) 88
SspMI CTAG 5 cut(s) 741, 746, 918, 1356, 1551
StuI AGGCCT 1 cut(s) 324
StyD4I CCNGG 8 cut(s) 242, 336, 337, 355, 366, 398, 1655, 1656
StyI CCWWGG 2 cut(s) 1009, 1383
TaaI ACNGT 2 cut(s) 136, 994
TaiI ACGT 2 cut(s) 809, 882
TaqI TCGA 2 cut(s) 1251, 1705
TatI WGTACW 1 cut(s) 31
TauI GCSGC 3 cut(s) 355, 455, 677
TfiI GAWTC 4 cut(s) 376, 985, 1248, 1315
Tru1I TTAA 4 cut(s) 84, 687, 1137, 1160
Tru9I TTAA 4 cut(s) 84, 687, 1137, 1160
TscAI CASTG 2 cut(s) 22, 999
TseI GCWGC 5 cut(s) 167, 607, 677, 680, 1025
TspDTI ATGAA 3 cut(s) 920, 1366, 1656
TspGWI ACGGA 1 cut(s) 242
TspMI CCCGGG 2 cut(s) 337, 1656
TspRI CASTG 2 cut(s) 22, 999
VneI GTGCAC 2 cut(s) 1614, 1689
VpaK11BI GGWCC 1 cut(s) 341
XapI RAATTY 2 cut(s) 491, 1428
XceI RCATGY 2 cut(s) 1145, 1494
XmaI CCCGGG 2 cut(s) 337, 1656
XmiI GTMKAC 2 cut(s) 1089, 1441
XspI CTAG 5 cut(s) 741, 746, 918, 1356, 1551
Zsp2I ATGCAT 1 cut(s) 1561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.