Rh2BG169900

Vitamin B6 photo-protection and homoeostasis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0014372
Physical Location & Seq
Reverse (-)
14987699 .. 14990346
2648 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG169900.1

Sequence Viewer

Length: 1581 bp
ATGCAATCATCTTTCTATGCAGCCTCCAACTCCCACCACTTCCTCCTCTCATGGAAAACCCCACAACCCCAATTCACACCCCGCAAGCCACTCCCCAGGAAGCTCCGTACCACCTTCAAAGCCCCAACCTTTACCAACTCCCTCAGAACCTCAATTGGGTACGAGCCGGAAGAAGGCCTCGGAGAAGACCCGGGTCCTTCAACGCCGCCGGGTCGGCTCCCGGTCGTGATTCGGAGGTCGGGTCGGGTTTCCAGGTACTTCTGGGATGGGGATTGCTTGCAATTAGTCGGTGTTGATGGCCGTGCGGCGTCGTTTGGTTTGGATTTGGACGATGGATTTCGGAAATTTTATAGAGTCTGTAGTTGTGCTGTTAGGGATTTCTTTATTCCCAAGCAAGTTAGTAGGAATTATATGAGCTATGTGAAATGGAAGTTCTTGCACCGCGTTTTTAGCTCTGCGCTGCAGGTTCTTGCTACTCAGGCAATGTTTCGGGCCATTGGGATTGGGTACTCTCGTTCGCTTCCAGCGGCTGCTGCTCTTAACTGGGTCTTGAAGGATGGACTTGGACGGCTGAGTAGGTGCATCTATACTGCTAGTCTAGCGTCTGCTTTTGATACCAATTTGAAGAGAGTTCGGTTTTCAACCTCTGTTCTGTTCACGTTGAGTATTGGAGTTGAGCTGTTGACACCTGCATATCCTCAGTATTTCCTGCTTCTTGCATCTTTAGCCAACGTTGCAAAACAAATAAGCTTGGCTTGCTATATAGCAACTAGTTCTGCTGTTCATAGAAGCTTTGCAATAGCAGATAATCTTGGTGAACTTTCGGCAAAGGCACAGATTCAAACAGTGTGCTTTGATAACCTTGGCCTTTTGCTTGCTGCATTATTGAATATGTTGTTGAAGAACAACCAAAGGTTGCAGACAGGCTTGCCCTTTGTTGTATACCCCATCTTCTCAGCACTTGACCTTTGTGGAATATATCAAGGGCTTAAACATGTCCATTTACAAACATTAAGTAAGGATAGACTTGAAATTCTGCTAAATACTTGGATCAAGTTAGGTAAAGTTCCTTCACCTGCAGAAGTGAGTAAAGAAGAAGGAATCGATTTCCTGCGGAGCAAAGACAAAGGATTATGGCCCATCAGAATAGGGTACCTGGATCCAAAGAATCAAATCCCCAAGTTATCCATGATGGCGATGAGATCTACTAGTGATGATGATTATTACTTCATATCCATGGAGACATTTTATACAAGAAAACGAAGAACTAAGCAACATGGAATTCTTCTTTGTCTACGGGAAAGAGCCAGCACTCCAGATATTATCAAGGGTCTGTTGCAGGCATGCTATATCCGCAAAGTCCTGCTTATCGACGAGAATAGGTGGGCGGACAAGGTAGATGCTAGAGATGCATTAGACTCGACTCTAAACGAATGGCCAAAATTGATTGATGAGAGCAAACGGCGTGCACAAGGCGATATGTACCTGTTGAATGAACAAATGGTGGCCCGGGGTTGGGCTACTAAGAATATCTTACTGAGTGCACAAGAGCAGACTCGATATAGTTTTGTAGATGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF647

Protein Analysis

526

Amino Acids

59.5

Weight (kDa)

9.58

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UVB_sens_prot PF04884 123 - 352 5.7e-64 Vitamin B6 photo-protection and homoeostasis domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014372)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23470
fragaria_vesca FvH4_1g14600 FvH4_1g14600 FvH4_1g14600
malus_domestica MD02G1159600.v1.1
prunus_persica Prupe.7G144300_v2.0.a1
pyrus_communis pycom02g12590
rosa_chinensis RchiOBHm_Chr2g0103381
rosa_laevigata RLG00000017232
rosa_multiflora Rmu_sc0002434.1_g000009
rosa_roxburghii Rroxscaffold_2G00139670
rosa_rugosa Rorug02G0114700
rosa_samantha Rh2AG162800 Rh2BG169900 Rh2CG170000 Rh2DG168900
rosa_wichuraiana Rw2G012790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 697, 1084
Acc36I ACCTGC 3 cut(s) 454, 697, 1084
Acc65I GGTACC 1 cut(s) 1152
AccB1I GGYRCC 1 cut(s) 1152
AccI GTMKAC 2 cut(s) 942, 1294
AccII CGCG 1 cut(s) 444
AciI CCGC 8 cut(s) 82, 206, 305, 442, 527, 1114, 1354, 1388
AclI AACGTT 1 cut(s) 732
AclWI GGATC 3 cut(s) 1058, 1154, 1167
AcoI YGGCCR 2 cut(s) 298, 1436
AcsI RAATTY 3 cut(s) 344, 1032, 1281
AcyI GRCGYC 1 cut(s) 308
AfaI GTAC 6 cut(s) 109, 161, 257, 509, 1154, 1484
AfiI CCNNNNNNNGG 4 cut(s) 156, 173, 1515, 1516
AflIII ACRYGT 1 cut(s) 994
AhlI ACTAGT 2 cut(s) 770, 1208
AjnI CCWGG 3 cut(s) 95, 251, 1155
AluBI AGCT 6 cut(s) 103, 417, 453, 679, 750, 792
AluI AGCT 6 cut(s) 103, 417, 453, 679, 750, 792
Alw21I GWGCWC 2 cut(s) 1471, 1546
Alw26I GTCTC 1 cut(s) 1235
Alw44I GTGCAC 2 cut(s) 1467, 1542
AlwI GGATC 3 cut(s) 1058, 1154, 1167
AlwNI CAGNNNCTG 1 cut(s) 530
Ama87I CYCGRG 2 cut(s) 190, 1509
AoxI GGCC 7 cut(s) 175, 298, 492, 865, 1136, 1436, 1506
ApaLI GTGCAC 2 cut(s) 1467, 1542
ApeKI GCWGC 5 cut(s) 20, 460, 530, 533, 878
ApoI RAATTY 3 cut(s) 344, 1032, 1281
Asp718I GGTACC 1 cut(s) 1152
AspLEI GCGC 1 cut(s) 460
AspS9I GGNCC 4 cut(s) 194, 492, 1137, 1507
AsuC2I CCSGG 6 cut(s) 191, 192, 210, 221, 1510, 1511
AsuHPI GGTGA 2 cut(s) 827, 1065
AvaI CYCGRG 2 cut(s) 190, 1509
AvaII GGWCC 1 cut(s) 194
BaeGI GKGCMC 2 cut(s) 1471, 1546
BaeI ACNNNNGTAYC 2 cut(s) 499, 532
BalI TGGCCA 1 cut(s) 1438
BamHI GGATCC 1 cut(s) 1159
BanI GGYRCC 1 cut(s) 1152
BarI GAAGNNNNNNTAC 2 cut(s) 1054, 1086
BbsI GAAGAC 1 cut(s) 192
Bbv12I GWGCWC 2 cut(s) 1471, 1546
BbvI GCAGC 5 cut(s) 32, 447, 517, 520, 865
BccI CCATC 7 cut(s) 260, 290, 326, 551, 956, 1148, 1186
BceAI ACGGC 3 cut(s) 285, 584, 1478
BcgI CGANNNNNNTGC 2 cut(s) 1401, 1435
BciT130I CCWGG 3 cut(s) 97, 253, 1157
BcnI CCSGG 6 cut(s) 191, 192, 210, 221, 1510, 1511
BcoDI GTCTC 1 cut(s) 1235
BcuI ACTAGT 2 cut(s) 770, 1208
BfaI CTAG 5 cut(s) 594, 599, 771, 1209, 1404
BfmI CTRYAG 3 cut(s) 358, 461, 1077
BfuAI ACCTGC 3 cut(s) 454, 697, 1084
BglI GCCNNNNNGGC 1 cut(s) 214
BglII AGATCT 1 cut(s) 1202
BisI GCNGC 8 cut(s) 21, 206, 306, 461, 528, 531, 534, 879
BlsI GCNGC 8 cut(s) 22, 207, 307, 462, 529, 532, 535, 880
Bme1390I CCNGG 9 cut(s) 97, 191, 192, 210, 221, 253, 1157, 1510, 1511
Bme18I GGWCC 1 cut(s) 194
BmeT110I CYCGRG 2 cut(s) 190, 1509
BmgT120I GGNCC 4 cut(s) 194, 492, 1137, 1507
BmiI GGNNCC 4 cut(s) 195, 218, 1154, 1161
BmrFI CCNGG 9 cut(s) 97, 191, 192, 210, 221, 253, 1157, 1510, 1511
BmrI ACTGGG 1 cut(s) 553
BmsI GCATC 4 cut(s) 591, 728, 1390, 1399
BmuI ACTGGG 1 cut(s) 553
BoxI GACNNNNGTC 1 cut(s) 192
BpiI GAAGAC 1 cut(s) 192
BpmI CTGGAG 1 cut(s) 1299
BpuMI CCSGG 6 cut(s) 191, 192, 210, 221, 1510, 1511
Bsa29I ATCGAT 1 cut(s) 1104
BsaHI GRCGYC 1 cut(s) 308
BsaJI CCNNGG 7 cut(s) 95, 178, 190, 862, 1236, 1509, 1510
BsaXI ACNNNNNCTCC 2 cut(s) 226, 256
Bsc4I CCNNNNNNNGG 4 cut(s) 156, 173, 1515, 1516
Bse1I ACTGG 1 cut(s) 548
Bse3DI GCAATG 1 cut(s) 489
BseBI CCWGG 3 cut(s) 97, 253, 1157
BseCI ATCGAT 1 cut(s) 1104
BseDI CCNNGG 7 cut(s) 95, 178, 190, 862, 1236, 1509, 1510
BseGI GGATG 2 cut(s) 271, 562
BseLI CCNNNNNNNGG 4 cut(s) 156, 173, 1515, 1516
BseMI GCAATG 1 cut(s) 489
BseMII CTCAG 6 cut(s) 157, 491, 563, 713, 969, 1529
BseNI ACTGG 1 cut(s) 548
BseRI GAGGAG 1 cut(s) 35
BseSI GKGCMC 2 cut(s) 1471, 1546
BseXI GCAGC 5 cut(s) 32, 447, 517, 520, 865
Bsh1236I CGCG 1 cut(s) 444
Bsh1285I CGRYCG 1 cut(s) 225
BshFI GGCC 7 cut(s) 177, 300, 494, 867, 1138, 1438, 1508
BshNI GGYRCC 1 cut(s) 1152
BshVI ATCGAT 1 cut(s) 1104
BsiEI CGRYCG 1 cut(s) 225
BsiHKAI GWGCWC 2 cut(s) 1471, 1546
BsiHKCI CYCGRG 2 cut(s) 190, 1509
BsiSI CCGG 5 cut(s) 167, 191, 209, 221, 1510
BslI CCNNNNNNNGG 4 cut(s) 156, 173, 1515, 1516
BsmAI GTCTC 1 cut(s) 1235
BsnI GGCC 7 cut(s) 177, 300, 494, 867, 1138, 1438, 1508
BsoBI CYCGRG 2 cut(s) 190, 1509
Bsp1286I GDGCHC 2 cut(s) 1471, 1546
Bsp143I GATC 3 cut(s) 1050, 1159, 1202
Bsp19I CCATGG 1 cut(s) 1236
BspACI CCGC 8 cut(s) 82, 206, 305, 442, 527, 1114, 1354, 1388
BspANI GGCC 7 cut(s) 177, 300, 494, 867, 1138, 1438, 1508
BspCNI CTCAG 6 cut(s) 156, 490, 564, 712, 968, 1530
BspDI ATCGAT 1 cut(s) 1104
BspFNI CGCG 1 cut(s) 444
BspLI GGNNCC 4 cut(s) 195, 218, 1154, 1161
BspMAI CTGCAG 2 cut(s) 465, 1081
BspMI ACCTGC 3 cut(s) 454, 697, 1084
BspPI GGATC 3 cut(s) 1058, 1154, 1167
BspT107I GGYRCC 1 cut(s) 1152
BsrDI GCAATG 1 cut(s) 489
BsrI ACTGG 1 cut(s) 548
BssECI CCNNGG 7 cut(s) 95, 178, 190, 862, 1236, 1509, 1510
BssMI GATC 3 cut(s) 1050, 1159, 1202
BssNAI GTATAC 1 cut(s) 943
BssNI GRCGYC 1 cut(s) 308
BssT1I CCWWGG 2 cut(s) 862, 1236
Bst1107I GTATAC 1 cut(s) 943
Bst2UI CCWGG 3 cut(s) 97, 253, 1157
Bst4CI ACNGT 1 cut(s) 847
Bst6I CTCTTC 1 cut(s) 620
BstACI GRCGYC 1 cut(s) 308
BstC8I GCNNGC 9 cut(s) 86, 278, 757, 876, 929, 1309, 1341, 1345, 1467
BstDEI CTNAG 8 cut(s) 143, 477, 572, 699, 955, 1269, 1524, 1538
BstDSI CCRYGG 1 cut(s) 1236
BstF5I GGATG 2 cut(s) 271, 562
BstFNI CGCG 1 cut(s) 444
BstHHI GCGC 1 cut(s) 460
BstKTI GATC 3 cut(s) 1053, 1162, 1205
BstMAI GTCTC 1 cut(s) 1235
BstMBI GATC 3 cut(s) 1050, 1159, 1202
BstMCI CGRYCG 1 cut(s) 225
BstNI CCWGG 3 cut(s) 97, 253, 1157
BstNSI RCATGY 2 cut(s) 998, 1347
BstPAI GACNNNNGTC 1 cut(s) 192
BstSCI CCNGG 9 cut(s) 95, 189, 190, 208, 219, 251, 1155, 1508, 1509
BstSFI CTRYAG 3 cut(s) 358, 461, 1077
BstSLI GKGCMC 2 cut(s) 1471, 1546
BstUI CGCG 1 cut(s) 444
BstV1I GCAGC 5 cut(s) 32, 447, 517, 520, 865
BstV2I GAAGAC 1 cut(s) 192
BstX2I RGATCY 2 cut(s) 1159, 1202
BstYI RGATCY 2 cut(s) 1159, 1202
BstZ17I GTATAC 1 cut(s) 943
Bsu15I ATCGAT 1 cut(s) 1104
BsuRI GGCC 7 cut(s) 177, 300, 494, 867, 1138, 1438, 1508
BsuTUI ATCGAT 1 cut(s) 1104
BtgI CCRYGG 1 cut(s) 1236
BtgZI GCGATG 1 cut(s) 1211
BtsCI GGATG 2 cut(s) 271, 562
BtsIMutI CAGTG 1 cut(s) 852
BveI ACCTGC 3 cut(s) 454, 697, 1084
Cac8I GCNNGC 9 cut(s) 86, 278, 757, 876, 929, 1309, 1341, 1345, 1467
CaiI CAGNNNCTG 1 cut(s) 530
CfoI GCGC 1 cut(s) 460
Cfr13I GGNCC 4 cut(s) 194, 492, 1137, 1507
Cfr9I CCCGGG 2 cut(s) 190, 1509
ClaI ATCGAT 1 cut(s) 1104
CseI GACGC 2 cut(s) 297, 591
Csp6I GTAC 6 cut(s) 108, 160, 256, 508, 1153, 1483
CviAII CATG 6 cut(s) 51, 995, 1189, 1237, 1277, 1344
CviQI GTAC 6 cut(s) 108, 160, 256, 508, 1153, 1483
DdeI CTNAG 8 cut(s) 143, 477, 572, 699, 955, 1269, 1524, 1538
DpnI GATC 3 cut(s) 1052, 1161, 1204
DpnII GATC 3 cut(s) 1050, 1159, 1202
EaeI YGGCCR 2 cut(s) 298, 1436
Eam1104I CTCTTC 1 cut(s) 620
EarI CTCTTC 1 cut(s) 620
EciI GGCGGA 1 cut(s) 1403
Eco130I CCWWGG 2 cut(s) 862, 1236
Eco147I AGGCCT 1 cut(s) 177
Eco47I GGWCC 1 cut(s) 194
Eco88I CYCGRG 2 cut(s) 190, 1509
EcoO109I RGGNCCY 1 cut(s) 194
EcoRI GAATTC 1 cut(s) 1281
EcoRII CCWGG 3 cut(s) 95, 251, 1155
EcoT14I CCWWGG 2 cut(s) 862, 1236
EcoT22I ATGCAT 1 cut(s) 1414
ErhI CCWWGG 2 cut(s) 862, 1236
FaeI CATG 6 cut(s) 54, 998, 1192, 1240, 1280, 1347
FalI AAGNNNNNCTT 6 cut(s) 739, 771, 1350, 1382, 1517, 1549
FatI CATG 6 cut(s) 50, 994, 1188, 1236, 1276, 1343
FauI CCCGC 1 cut(s) 89
FblI GTMKAC 2 cut(s) 942, 1294
Fnu4HI GCNGC 8 cut(s) 21, 206, 306, 461, 528, 531, 534, 879
FokI GGATG 2 cut(s) 278, 569
Fsp4HI GCNGC 8 cut(s) 21, 206, 306, 461, 528, 531, 534, 879
FspBI CTAG 5 cut(s) 594, 599, 771, 1209, 1404
GlaI GCGC 1 cut(s) 459
GluI GCNGC 8 cut(s) 21, 206, 306, 461, 528, 531, 534, 879
GsuI CTGGAG 1 cut(s) 1299
HaeIII GGCC 7 cut(s) 177, 300, 494, 867, 1138, 1438, 1508
HapII CCGG 5 cut(s) 167, 191, 209, 221, 1510
HgaI GACGC 2 cut(s) 297, 591
HhaI GCGC 1 cut(s) 460
Hin1I GRCGYC 1 cut(s) 308
Hin1II CATG 6 cut(s) 54, 998, 1192, 1240, 1280, 1347
Hin6I GCGC 1 cut(s) 458
HinP1I GCGC 1 cut(s) 458
HincII GTYRAC 1 cut(s) 684
HindII GTYRAC 1 cut(s) 684
HindIII AAGCTT 2 cut(s) 748, 790
HinfI GANTC 8 cut(s) 229, 354, 838, 1101, 1168, 1418, 1423, 1555
HpaII CCGG 5 cut(s) 167, 191, 209, 221, 1510
HphI GGTGA 2 cut(s) 827, 1065
Hpy166II GTNNAC 7 cut(s) 657, 684, 818, 943, 1295, 1469, 1544
Hpy188I TCNGA 5 cut(s) 146, 182, 234, 342, 1145
Hpy188III TCNNGA 3 cut(s) 226, 550, 1316
Hpy8I GTNNAC 7 cut(s) 657, 684, 818, 943, 1295, 1469, 1544
Hpy99I CGWCG 2 cut(s) 313, 1376
HpyAV CCTTC 6 cut(s) 124, 167, 207, 547, 1080, 1091
HpyCH4III ACNGT 1 cut(s) 847
HpyCH4IV ACGT 2 cut(s) 659, 732
HpyF3I CTNAG 8 cut(s) 143, 477, 572, 699, 955, 1269, 1524, 1538
HpySE526I ACGT 2 cut(s) 659, 732
Hsp92I GRCGYC 1 cut(s) 308
Hsp92II CATG 6 cut(s) 54, 998, 1192, 1240, 1280, 1347
HspAI GCGC 1 cut(s) 458
KpnI GGTACC 1 cut(s) 1156
Kzo9I GATC 3 cut(s) 1050, 1159, 1202
LmnI GCTCC 3 cut(s) 108, 222, 1116
Lsp1109I GCAGC 5 cut(s) 32, 447, 517, 520, 865
LweI GCATC 4 cut(s) 591, 728, 1390, 1399
MaeI CTAG 5 cut(s) 594, 599, 771, 1209, 1404
MaeII ACGT 2 cut(s) 659, 732
MalI GATC 3 cut(s) 1052, 1161, 1204
MboI GATC 3 cut(s) 1050, 1159, 1202
MboII GAAGA 8 cut(s) 182, 197, 637, 913, 943, 1106, 1275, 1277
MfeI CAATTG 1 cut(s) 153
MflI RGATCY 2 cut(s) 1159, 1202
MhlI GDGCHC 2 cut(s) 1471, 1546
MlsI TGGCCA 1 cut(s) 1438
MluCI AATT 9 cut(s) 71, 153, 281, 344, 406, 619, 1032, 1281, 1442
MluNI TGGCCA 1 cut(s) 1438
MlyI GAGTC 4 cut(s) 363, 1412, 1417, 1549
MmeI TCCRAC 1 cut(s) 51
MnlI CCTC 9 cut(s) 34, 53, 56, 152, 160, 188, 228, 655, 708
Mox20I TGGCCA 1 cut(s) 1438
Mph1103I ATGCAT 1 cut(s) 1414
MscI TGGCCA 1 cut(s) 1438
MseI TTAA 3 cut(s) 540, 990, 1013
MslI CAYNNNNRTG 1 cut(s) 1235
Msp20I TGGCCA 1 cut(s) 1438
MspA1I CMGCKG 1 cut(s) 527
MspI CCGG 5 cut(s) 167, 191, 209, 221, 1510
MspR9I CCNGG 9 cut(s) 97, 191, 192, 210, 221, 253, 1157, 1510, 1511
MunI CAATTG 1 cut(s) 153
MvaI CCWGG 3 cut(s) 97, 253, 1157
MvnI CGCG 1 cut(s) 444
NciI CCSGG 6 cut(s) 191, 192, 210, 221, 1510, 1511
NcoI CCATGG 1 cut(s) 1236
NdeII GATC 3 cut(s) 1050, 1159, 1202
NlaIII CATG 6 cut(s) 54, 998, 1192, 1240, 1280, 1347
NlaIV GGNNCC 4 cut(s) 195, 218, 1154, 1161
NsiI ATGCAT 1 cut(s) 1414
NspI RCATGY 2 cut(s) 998, 1347
PaeI GCATGC 1 cut(s) 1347
PaqCI CACCTGC 2 cut(s) 697, 1084
PceI AGGCCT 1 cut(s) 177
PciI ACATGT 1 cut(s) 994
PfeI GAWTC 4 cut(s) 229, 838, 1101, 1168
PkrI GCNGC 8 cut(s) 22, 207, 307, 462, 529, 532, 535, 880
PleI GAGTC 4 cut(s) 362, 1412, 1417, 1549
PpsI GAGTC 4 cut(s) 362, 1412, 1417, 1549
PpuMI RGGWCCY 1 cut(s) 194
PscI ACATGT 1 cut(s) 994
PshAI GACNNNNGTC 1 cut(s) 192
Psp1406I AACGTT 1 cut(s) 732
Psp5II RGGWCCY 1 cut(s) 194
Psp6I CCWGG 3 cut(s) 95, 251, 1155
PspGI CCWGG 3 cut(s) 95, 251, 1155
PspN4I GGNNCC 4 cut(s) 195, 218, 1154, 1161
PspPI GGNCC 4 cut(s) 194, 492, 1137, 1507
PspPPI RGGWCCY 1 cut(s) 194
PstI CTGCAG 2 cut(s) 465, 1081
PstNI CAGNNNCTG 1 cut(s) 530
PsuI RGATCY 2 cut(s) 1159, 1202
RsaI GTAC 6 cut(s) 109, 161, 257, 509, 1154, 1484
RsaNI GTAC 6 cut(s) 108, 160, 256, 508, 1153, 1483
RseI CAYNNNNRTG 1 cut(s) 1235
SaqAI TTAA 3 cut(s) 540, 990, 1013
SatI GCNGC 8 cut(s) 21, 206, 306, 461, 528, 531, 534, 879
Sau3AI GATC 3 cut(s) 1050, 1159, 1202
Sau96I GGNCC 4 cut(s) 194, 492, 1137, 1507
SchI GAGTC 4 cut(s) 363, 1412, 1417, 1549
ScrFI CCNGG 9 cut(s) 97, 191, 192, 210, 221, 253, 1157, 1510, 1511
SduI GDGCHC 2 cut(s) 1471, 1546
SfaNI GCATC 4 cut(s) 591, 728, 1390, 1399
SfcI CTRYAG 3 cut(s) 358, 461, 1077
SinI GGWCC 1 cut(s) 194
SmaI CCCGGG 2 cut(s) 192, 1511
SmiMI CAYNNNNRTG 1 cut(s) 1235
SpeI ACTAGT 2 cut(s) 770, 1208
SphI GCATGC 1 cut(s) 1347
Sse9I AATT 9 cut(s) 71, 153, 281, 344, 406, 619, 1032, 1281, 1442
SseBI AGGCCT 1 cut(s) 177
SsiI CCGC 8 cut(s) 82, 206, 305, 442, 527, 1114, 1354, 1388
SspMI CTAG 5 cut(s) 594, 599, 771, 1209, 1404
StuI AGGCCT 1 cut(s) 177
StyD4I CCNGG 9 cut(s) 95, 189, 190, 208, 219, 251, 1155, 1508, 1509
StyI CCWWGG 2 cut(s) 862, 1236
TaaI ACNGT 1 cut(s) 847
TaiI ACGT 2 cut(s) 662, 735
TaqI TCGA 4 cut(s) 1104, 1371, 1421, 1558
TasI AATT 9 cut(s) 71, 153, 281, 344, 406, 619, 1032, 1281, 1442
TauI GCSGC 3 cut(s) 208, 308, 530
TfiI GAWTC 4 cut(s) 229, 838, 1101, 1168
Tru1I TTAA 3 cut(s) 540, 990, 1013
Tru9I TTAA 3 cut(s) 540, 990, 1013
TscAI CASTG 1 cut(s) 852
TseI GCWGC 5 cut(s) 20, 460, 530, 533, 878
TspDTI ATGAA 3 cut(s) 773, 1219, 1509
TspGWI ACGGA 1 cut(s) 95
TspMI CCCGGG 2 cut(s) 190, 1509
TspRI CASTG 1 cut(s) 852
VneI GTGCAC 2 cut(s) 1467, 1542
VpaK11BI GGWCC 1 cut(s) 194
XapI RAATTY 3 cut(s) 344, 1032, 1281
XceI RCATGY 2 cut(s) 998, 1347
XmaI CCCGGG 2 cut(s) 190, 1509
XmiI GTMKAC 2 cut(s) 942, 1294
XspI CTAG 5 cut(s) 594, 599, 771, 1209, 1404
Zsp2I ATGCAT 1 cut(s) 1414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.