RchiOBHm_Chr2g0166911

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0016571
Physical Location & Seq
Reverse (-)
81627530 .. 81629804
2275 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1818 bp
ATGCAAATGTGCCTCCCTCTCCGCTCCCCAACTTGGGTTTCCCGCCGACGACTCCTCGACCAAAACCTCTCCGACCTCCACCGCTGCACAAACCTCAGCCACGTCAAGCAACTCCACGCCCAAATCCTCAAATCCCATCTCCACCAAGACCTCCACACCGCCCCCAAGCTCATCGCCGCCTTCTCTCTCTGCCGCCAGATGGCCCTCGCCGTCAACGTCTTCAACCAAGTCCACCACCCCAATGTTCACTTGTACAACACTCTCATAAGAGCTCACATTCACAACTCCCAGAGCTCCCAGGCTTTCGCGGCCTTCTTCGATATGCAGGTGAGTGGCGTATACCCTGATAATTTCACCTTCCCTTTTCTGTTAAAGGCGTGTTCCGGCAGGAATTGGCTGCCTGTGGTGCAGATGATTCATGCCCAGGTTGAGAAATTCGGGTTCTGTGGCGACATTTTCGTGCCGAATTCGCTGATTGATACTTACTCGAAGTGCGGATTGTTTGGTGTTAGTGAGGCGAGGAAGCTGTTTAGGGTGATGGGTGAGAGAGATATTGTTTCTTGGAACTCTATGATTGGGGGGCTGGCGAAAGCTGGAGAGTTGAGTGATGCACGCAACTTGTTCGATGATATGCCTGAGAGAGATGCGGTGAGCTGGAATTCGATACTGGATGGGTATGCGAAGGCGGGGAGGATGGATGAAGCGTTTGAGTTGTTTGAGAGGATGCCACAGAGGAATGTGGTGTCTTGGTCGACTTTGGTTTCGGGTTATAGCAAAGTTGGGGATATGGGGATGGCGAGGATGATGTTTGATAGAATGCCTTTTAAGAATTTGGTTCCGTGGACCATTATTATATCTGGGTATGCTCAGAAGGGGCTTGCTAAGGAGGCGATTATGTTGTATGATCAGATGGAGAGAGATGGATTGAAGCTCGATAATGGGGCTATTATTAGTATATTGGCTGCTTGCGCGGAGTCTGGTTTGATTGCATTGGGGAAGAAAGTTCATGAATCTATTGAGAGGAATAGATTCAAGTGTAGTACTCCGGTTTTGAATGCGTTGCTTGATATGTATGCAAAGTGTGGTGGCTTGGAGGAAGCGTATAGAGTGTTTGATGGGATAGCAAAGAAAGATTTGGTGTCTTGGAATTCGATGCTCCAAGGGTTAGCCATGCATGGACATGGTGAGAAAGCACTTCAGCTGTTCTCTAGAATGGAGAAAGCTGGGTTTAGGCCGGATAAGGTCACCTTTATCGGTGTGTTATGTGCCTGCACGCATGCAGGCTTTGTGGAGGAGGGGCTTCATGCATTCCATACTATGGAAAAGGAGTATGGGATTGTACCTGAAATTGAGCATTACGGTTGCATGATTGACCTTTTGGGTCGAGGAGGGCGTCTTAGGGAAGCTTTTAGGCTTGTGCATAGCATGCCAATGGAACCGAATGCTGTTATATGGGGTACCCTTTTAGGGGCGTGCCGGATGCATAATGACCTTGAACTAGCAGAGGAGGCGCTGGATCAGCTTGTTAAGTTAGAGCCATCAGATCCAGGAAATTTTTCTATCGTCTCAAATATGTATGCTGCAGCTGGTGATTGGGAAAACATGGCCAATATGAGGCTACAAATGAGGAGCATAGGAGTCCAGAAAACTTCAGGGGCTAGTTCCATCGAGCTGGATGATGAGGTACATGAATTTACAGTATTCGATAGAGTTCATCCCAAATCGAATGACATATATGGGATGATTAACAGACTAGGTGAAGACCTGAAGCAAGTGGACACATCCTCAACGAGTATTAGTGTATTACCATTAGAATAG

Protein Analysis

605

Amino Acids

67.79

Weight (kDa)

6.3

Isoelectric Point (pI)

40.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 80 - 127 6e-10 PPR repeat family
PPR_2 PF13041 183 - 214 6e-07 PPR repeat family
PPR_1 PF12854 183 - 211 3.5e-06 PPR repeat
PPR PF01535 186 - 214 2.7e-07 PPR repeat
PPR_1 PF12854 214 - 242 2.5e-09 PPR repeat
PPR_2 PF13041 215 - 247 2.6e-09 PPR repeat family
PPR PF01535 217 - 247 4.4e-10 PPR repeat
PPR_2 PF13041 277 - 323 9e-07 PPR repeat family
PPR PF01535 280 - 309 5.8e-07 PPR repeat
PPR_2 PF13041 378 - 424 1.1e-11 PPR repeat family
PPR PF01535 380 - 410 9.3e-08 PPR repeat
E_motif PF20431 495 - 557 1.7e-16 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016571)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29230
fragaria_vesca FvH4_6g47760
malus_domestica MD17G1054700.v1.1
prunus_persica Prupe.3G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0166911
rosa_laevigata RLG00000021678
rosa_multiflora Rmu_sc0002735.1_g000016 Rmu_sc0005344.1_g000009
rosa_roxburghii Rroxscaffold_2G00084020
rosa_rugosa Rorug02G0526300
rosa_samantha Rh2BG604800 Rh2CG575500 Rh2DG616400
rosa_wichuraiana Rw2G049390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 316
Acc36I ACCTGC 1 cut(s) 316
Acc65I GGTACC 1 cut(s) 1457
AccB1I GGYRCC 1 cut(s) 1457
AccB7I CCANNNNNTGG 1 cut(s) 1318
AccBSI CCGCTC 1 cut(s) 24
AccI GTMKAC 2 cut(s) 339, 752
AccII CGCG 2 cut(s) 308, 971
AclWI GGATC 2 cut(s) 1524, 1538
AcoI YGGCCR 1 cut(s) 1605
AcsI RAATTY 7 cut(s) 434, 466, 658, 829, 1147, 1552, 1691
AcuI CTGAAG 3 cut(s) 1181, 1635, 1787
AcyI GRCGYC 1 cut(s) 1393
AfaI GTAC 5 cut(s) 254, 1042, 1341, 1459, 1686
AfiI CCNNNNNNNGG 7 cut(s) 33, 34, 199, 1318, 1467, 1468, 1614
AgsI TTSAA 5 cut(s) 223, 928, 1033, 1054, 1496
AjiI CACGTC 1 cut(s) 103
AjnI CCWGG 3 cut(s) 297, 423, 1546
AjuI GAANNNNNNNTTGG 2 cut(s) 22, 54
Alw21I GWGCWC 2 cut(s) 274, 296
Alw26I GTCTC 1 cut(s) 1570
AlwI GGATC 2 cut(s) 1524, 1538
AoxI GGCC 4 cut(s) 201, 309, 1232, 1605
ApeKI GCWGC 5 cut(s) 84, 397, 962, 1580, 1583
ApoI RAATTY 7 cut(s) 434, 466, 658, 829, 1147, 1552, 1691
ArsI GACNNNNNNTTYG 2 cut(s) 745, 777
Asp700I GAANNNNTTC 2 cut(s) 1028, 1555
Asp718I GGTACC 1 cut(s) 1457
AspLEI GCGC 2 cut(s) 971, 1513
AspS9I GGNCC 2 cut(s) 202, 843
AsuHPI GGTGA 9 cut(s) 340, 346, 547, 554, 661, 1196, 1237, 1601, 1769
AvaII GGWCC 1 cut(s) 843
BalI TGGCCA 1 cut(s) 1607
BanI GGYRCC 1 cut(s) 1457
BanII GRGCYC 2 cut(s) 274, 296
BbsI GAAGAC 2 cut(s) 211, 1767
Bbv12I GWGCWC 2 cut(s) 274, 296
BbvCI CCTCAGC 1 cut(s) 95
BbvI GCAGC 5 cut(s) 71, 384, 949, 1567, 1595
BceAI ACGGC 1 cut(s) 194
BcgI CGANNNNNNTGC 2 cut(s) 604, 638
BciT130I CCWGG 3 cut(s) 299, 425, 1548
BclI TGATCA 1 cut(s) 904
BcoDI GTCTC 1 cut(s) 1570
BfaI CTAG 4 cut(s) 1209, 1499, 1659, 1754
BfmI CTRYAG 1 cut(s) 1581
BfoI RGCGCY 1 cut(s) 1514
BfuAI ACCTGC 1 cut(s) 316
BisI GCNGC 8 cut(s) 85, 177, 193, 309, 398, 963, 1581, 1584
BlsI GCNGC 8 cut(s) 86, 178, 194, 310, 399, 964, 1582, 1585
BmcAI AGTACT 1 cut(s) 1042
Bme1390I CCNGG 3 cut(s) 299, 425, 1548
Bme18I GGWCC 1 cut(s) 843
BmgBI CACGTC 1 cut(s) 103
BmgT120I GGNCC 2 cut(s) 202, 843
BmiI GGNNCC 3 cut(s) 837, 1437, 1459
BmrFI CCNGG 3 cut(s) 299, 425, 1548
BmsI GCATC 5 cut(s) 598, 634, 714, 1143, 1470
BpiI GAAGAC 2 cut(s) 211, 1767
BpmI CTGGAG 1 cut(s) 615
Bpu10I CCTNAGC 2 cut(s) 95, 882
BsaHI GRCGYC 1 cut(s) 1393
BsaJI CCNNGG 4 cut(s) 297, 423, 839, 1159
BsaWI WCCGGW 1 cut(s) 1045
BsaXI ACNNNNNCTCC 2 cut(s) 1085, 1115
Bsc4I CCNNNNNNNGG 7 cut(s) 33, 34, 199, 1318, 1467, 1468, 1614
Bse1I ACTGG 1 cut(s) 672
BseBI CCWGG 3 cut(s) 299, 425, 1548
BseDI CCNNGG 4 cut(s) 297, 423, 839, 1159
BseLI CCNNNNNNNGG 7 cut(s) 33, 34, 199, 1318, 1467, 1468, 1614
BseMII CTCAG 3 cut(s) 109, 627, 881
BseNI ACTGG 1 cut(s) 672
BseRI GAGGAG 5 cut(s) 44, 1307, 1401, 1520, 1642
BseXI GCAGC 5 cut(s) 71, 384, 949, 1567, 1595
BseYI CCCAGC 1 cut(s) 1223
BsgI GTGCAG 3 cut(s) 70, 428, 1255
Bsh1236I CGCG 2 cut(s) 308, 971
BshFI GGCC 4 cut(s) 203, 311, 1234, 1607
BshNI GGYRCC 1 cut(s) 1457
BsiHKAI GWGCWC 2 cut(s) 274, 296
BsiSI CCGG 4 cut(s) 384, 1046, 1235, 1477
BslI CCNNNNNNNGG 7 cut(s) 33, 34, 199, 1318, 1467, 1468, 1614
BsmAI GTCTC 1 cut(s) 1570
BsmBI CGTCTC 1 cut(s) 1570
BsmI GAATGC 4 cut(s) 822, 1060, 1307, 1447
BsnI GGCC 4 cut(s) 203, 311, 1234, 1607
Bsp1286I GDGCHC 2 cut(s) 274, 296
Bsp1407I TGTACA 1 cut(s) 252
Bsp143I GATC 3 cut(s) 904, 1516, 1543
BspANI GGCC 4 cut(s) 203, 311, 1234, 1607
BspCNI CTCAG 3 cut(s) 108, 628, 880
BspFNI CGCG 2 cut(s) 308, 971
BspHI TCATGA 1 cut(s) 1006
BspLI GGNNCC 3 cut(s) 837, 1437, 1459
BspMAI CTGCAG 1 cut(s) 1585
BspMI ACCTGC 1 cut(s) 316
BspPI GGATC 2 cut(s) 1524, 1538
BspT107I GGYRCC 1 cut(s) 1457
BsrBI CCGCTC 1 cut(s) 24
BsrGI TGTACA 1 cut(s) 252
BsrI ACTGG 1 cut(s) 672
BssECI CCNNGG 4 cut(s) 297, 423, 839, 1159
BssMI GATC 3 cut(s) 904, 1516, 1543
BssNAI GTATAC 1 cut(s) 340
BssNI GRCGYC 1 cut(s) 1393
BssT1I CCWWGG 1 cut(s) 1159
Bst1107I GTATAC 1 cut(s) 340
Bst2UI CCWGG 3 cut(s) 299, 425, 1548
Bst4CI ACNGT 2 cut(s) 1361, 1699
BstACI GRCGYC 1 cut(s) 1393
BstAPI GCANNNNNTGC 1 cut(s) 1426
BstAUI TGTACA 1 cut(s) 252
BstDEI CTNAG 5 cut(s) 95, 636, 867, 882, 1397
BstDSI CCRYGG 1 cut(s) 839
BstEII GGTNACC 1 cut(s) 1243
BstFNI CGCG 2 cut(s) 308, 971
BstH2I RGCGCY 1 cut(s) 1514
BstHHI GCGC 2 cut(s) 971, 1513
BstKTI GATC 3 cut(s) 907, 1519, 1546
BstMAI GTCTC 1 cut(s) 1570
BstMBI GATC 3 cut(s) 904, 1516, 1543
BstMWI GCNNNNNNNGC 8 cut(s) 308, 406, 469, 887, 968, 1426, 1508, 1519
BstNI CCWGG 3 cut(s) 299, 425, 1548
BstNSI RCATGY 2 cut(s) 1280, 1429
BstPI GGTNACC 1 cut(s) 1243
BstSCI CCNGG 3 cut(s) 297, 423, 1546
BstSFI CTRYAG 1 cut(s) 1581
BstUI CGCG 2 cut(s) 308, 971
BstV1I GCAGC 5 cut(s) 71, 384, 949, 1567, 1595
BstV2I GAAGAC 2 cut(s) 211, 1767
BstX2I RGATCY 1 cut(s) 1543
BstXI CCANNNNNNTGG 1 cut(s) 1672
BstYI RGATCY 1 cut(s) 1543
BstZ17I GTATAC 1 cut(s) 340
BsuRI GGCC 4 cut(s) 203, 311, 1234, 1607
BtgI CCRYGG 1 cut(s) 839
BtgZI GCGATG 1 cut(s) 157
BtrI CACGTC 1 cut(s) 103
BveI ACCTGC 1 cut(s) 316
CciI TCATGA 1 cut(s) 1006
CfoI GCGC 2 cut(s) 971, 1513
Cfr13I GGNCC 2 cut(s) 202, 843
CseI GACGC 1 cut(s) 1382
Csp6I GTAC 5 cut(s) 253, 1041, 1340, 1458, 1685
CviQI GTAC 5 cut(s) 253, 1041, 1340, 1458, 1685
DdeI CTNAG 5 cut(s) 95, 636, 867, 882, 1397
DpnI GATC 3 cut(s) 906, 1518, 1545
DpnII GATC 3 cut(s) 904, 1516, 1543
EaeI YGGCCR 1 cut(s) 1605
Ecl136II GAGCTC 2 cut(s) 272, 294
Eco130I CCWWGG 1 cut(s) 1159
Eco24I GRGCYC 2 cut(s) 274, 296
Eco47I GGWCC 1 cut(s) 843
Eco53kI GAGCTC 2 cut(s) 272, 294
Eco57I CTGAAG 3 cut(s) 1181, 1635, 1787
Eco91I GGTNACC 1 cut(s) 1243
EcoICRI GAGCTC 2 cut(s) 272, 294
EcoO65I GGTNACC 1 cut(s) 1243
EcoRI GAATTC 3 cut(s) 466, 658, 1147
EcoRII CCWGG 3 cut(s) 297, 423, 1546
EcoT14I CCWWGG 1 cut(s) 1159
EcoT22I ATGCAT 3 cut(s) 1176, 1309, 1485
EcoT38I GRGCYC 2 cut(s) 274, 296
ErhI CCWWGG 1 cut(s) 1159
Esp3I CGTCTC 1 cut(s) 1570
FalI AAGNNNNNCTT 2 cut(s) 1232, 1264
FauI CCCGC 2 cut(s) 50, 679
FbaI TGATCA 1 cut(s) 904
FblI GTMKAC 2 cut(s) 339, 752
Fnu4HI GCNGC 8 cut(s) 85, 177, 193, 309, 398, 963, 1581, 1584
FriOI GRGCYC 2 cut(s) 274, 296
Fsp4HI GCNGC 8 cut(s) 85, 177, 193, 309, 398, 963, 1581, 1584
FspBI CTAG 4 cut(s) 1209, 1499, 1659, 1754
GlaI GCGC 2 cut(s) 970, 1512
GluI GCNGC 8 cut(s) 85, 177, 193, 309, 398, 963, 1581, 1584
GsaI CCCAGC 1 cut(s) 1227
GsuI CTGGAG 1 cut(s) 615
HaeII RGCGCY 1 cut(s) 1514
HaeIII GGCC 4 cut(s) 203, 311, 1234, 1607
HapII CCGG 4 cut(s) 384, 1046, 1235, 1477
HgaI GACGC 1 cut(s) 1382
HhaI GCGC 2 cut(s) 971, 1513
Hin1I GRCGYC 1 cut(s) 1393
Hin6I GCGC 2 cut(s) 969, 1511
HinP1I GCGC 2 cut(s) 969, 1511
HincII GTYRAC 2 cut(s) 214, 753
HindII GTYRAC 2 cut(s) 214, 753
HindIII AAGCTT 1 cut(s) 1404
HinfI GANTC 6 cut(s) 51, 415, 974, 1010, 1029, 1638
HpaII CCGG 4 cut(s) 384, 1046, 1235, 1477
HphI GGTGA 9 cut(s) 340, 346, 547, 554, 661, 1196, 1237, 1601, 1769
Hpy166II GTNNAC 7 cut(s) 214, 232, 247, 340, 753, 843, 1777
Hpy188I TCNGA 4 cut(s) 73, 870, 909, 1543
Hpy188III TCNNGA 3 cut(s) 1007, 1209, 1642
Hpy8I GTNNAC 7 cut(s) 214, 232, 247, 340, 753, 843, 1777
Hpy99I CGWCG 1 cut(s) 51
HpyAV CCTTC 5 cut(s) 190, 322, 367, 676, 865
HpyCH4III ACNGT 2 cut(s) 1361, 1699
HpyCH4IV ACGT 2 cut(s) 102, 216
HpyF10VI GCNNNNNNNGC 8 cut(s) 308, 406, 469, 887, 968, 1426, 1508, 1519
HpyF3I CTNAG 5 cut(s) 95, 636, 867, 882, 1397
HpySE526I ACGT 2 cut(s) 102, 216
Hsp92I GRCGYC 1 cut(s) 1393
HspAI GCGC 2 cut(s) 969, 1511
KpnI GGTACC 1 cut(s) 1461
Ksp22I TGATCA 1 cut(s) 904
Kzo9I GATC 3 cut(s) 904, 1516, 1543
LmnI GCTCC 4 cut(s) 29, 299, 1161, 1629
Lsp1109I GCAGC 5 cut(s) 71, 384, 949, 1567, 1595
LweI GCATC 5 cut(s) 598, 634, 714, 1143, 1470
MaeI CTAG 4 cut(s) 1209, 1499, 1659, 1754
MaeII ACGT 2 cut(s) 102, 216
MaeIII GTNAC 1 cut(s) 1243
MalI GATC 3 cut(s) 906, 1518, 1545
MbiI CCGCTC 1 cut(s) 24
MboI GATC 3 cut(s) 904, 1516, 1543
MboII GAAGA 4 cut(s) 211, 307, 1009, 1772
MflI RGATCY 1 cut(s) 1543
MhlI GDGCHC 2 cut(s) 274, 296
MlsI TGGCCA 1 cut(s) 1607
MluNI TGGCCA 1 cut(s) 1607
MlyI GAGTC 3 cut(s) 45, 983, 1647
MmeI TCCRAC 1 cut(s) 96
Mox20I TGGCCA 1 cut(s) 1607
Mph1103I ATGCAT 3 cut(s) 1176, 1309, 1485
MroXI GAANNNNTTC 2 cut(s) 1028, 1555
MscI TGGCCA 1 cut(s) 1607
MseI TTAA 4 cut(s) 371, 825, 1527, 1746
MslI CAYNNNNRTG 4 cut(s) 240, 458, 1179, 1430
Msp20I TGGCCA 1 cut(s) 1607
MspA1I CMGCKG 3 cut(s) 84, 1201, 1586
MspI CCGG 4 cut(s) 384, 1046, 1235, 1477
MspR9I CCNGG 3 cut(s) 299, 425, 1548
Mva1269I GAATGC 4 cut(s) 822, 1060, 1307, 1447
MvaI CCWGG 3 cut(s) 299, 425, 1548
MvnI CGCG 2 cut(s) 308, 971
MwoI GCNNNNNNNGC 8 cut(s) 308, 406, 469, 887, 968, 1426, 1508, 1519
NdeII GATC 3 cut(s) 904, 1516, 1543
NlaIV GGNNCC 3 cut(s) 837, 1437, 1459
NmuCI GTSAC 1 cut(s) 1243
NsiI ATGCAT 3 cut(s) 1176, 1309, 1485
NspI RCATGY 2 cut(s) 1280, 1429
PaeI GCATGC 2 cut(s) 1280, 1429
PagI TCATGA 1 cut(s) 1006
PaqCI CACCTGC 1 cut(s) 316
PcsI WCGNNNNNNNCGW 2 cut(s) 213, 1390
PctI GAATGC 4 cut(s) 822, 1060, 1307, 1447
PdmI GAANNNNTTC 2 cut(s) 1028, 1555
PfeI GAWTC 3 cut(s) 415, 1010, 1029
PflMI CCANNNNNTGG 1 cut(s) 1318
PfoI TCCNGGA 1 cut(s) 1546
PkrI GCNGC 8 cut(s) 86, 178, 194, 310, 399, 964, 1582, 1585
PleI GAGTC 3 cut(s) 45, 982, 1646
PpsI GAGTC 3 cut(s) 45, 982, 1646
Psp124BI GAGCTC 2 cut(s) 274, 296
Psp6I CCWGG 3 cut(s) 297, 423, 1546
PspEI GGTNACC 1 cut(s) 1243
PspFI CCCAGC 1 cut(s) 1223
PspGI CCWGG 3 cut(s) 297, 423, 1546
PspN4I GGNNCC 3 cut(s) 837, 1437, 1459
PspPI GGNCC 2 cut(s) 202, 843
PstI CTGCAG 1 cut(s) 1585
PsuI RGATCY 1 cut(s) 1543
PvuII CAGCTG 2 cut(s) 1201, 1586
RsaI GTAC 5 cut(s) 254, 1042, 1341, 1459, 1686
RsaNI GTAC 5 cut(s) 253, 1041, 1340, 1458, 1685
RseI CAYNNNNRTG 4 cut(s) 240, 458, 1179, 1430
SacI GAGCTC 2 cut(s) 274, 296
SalI GTCGAC 1 cut(s) 751
SaqAI TTAA 4 cut(s) 371, 825, 1527, 1746
SatI GCNGC 8 cut(s) 85, 177, 193, 309, 398, 963, 1581, 1584
Sau3AI GATC 3 cut(s) 904, 1516, 1543
Sau96I GGNCC 2 cut(s) 202, 843
ScaI AGTACT 1 cut(s) 1042
SchI GAGTC 3 cut(s) 45, 983, 1647
ScrFI CCNGG 3 cut(s) 299, 425, 1548
SduI GDGCHC 2 cut(s) 274, 296
SfaNI GCATC 5 cut(s) 598, 634, 714, 1143, 1470
SfcI CTRYAG 1 cut(s) 1581
SinI GGWCC 1 cut(s) 843
SmiMI CAYNNNNRTG 4 cut(s) 240, 458, 1179, 1430
SphI GCATGC 2 cut(s) 1280, 1429
SspMI CTAG 4 cut(s) 1209, 1499, 1659, 1754
SstI GAGCTC 2 cut(s) 274, 296
StyD4I CCNGG 3 cut(s) 297, 423, 1546
StyI CCWWGG 1 cut(s) 1159
TaaI ACNGT 2 cut(s) 1361, 1699
TaiI ACGT 2 cut(s) 105, 219
TatI WGTACW 2 cut(s) 252, 1040
TauI GCSGC 3 cut(s) 179, 195, 311
TfiI GAWTC 3 cut(s) 415, 1010, 1029
Tru1I TTAA 4 cut(s) 371, 825, 1527, 1746
Tru9I TTAA 4 cut(s) 371, 825, 1527, 1746
TseFI GTSAC 1 cut(s) 1243
TseI GCWGC 5 cut(s) 84, 397, 962, 1580, 1583
Tsp45I GTSAC 1 cut(s) 1243
TspDTI ATGAA 7 cut(s) 407, 714, 995, 1023, 1292, 1703, 1704
TspGWI ACGGA 1 cut(s) 828
Van91I CCANNNNNTGG 1 cut(s) 1318
VpaK11BI GGWCC 1 cut(s) 843
XapI RAATTY 7 cut(s) 434, 466, 658, 829, 1147, 1552, 1691
XbaI TCTAGA 1 cut(s) 1208
XceI RCATGY 2 cut(s) 1280, 1429
XmiI GTMKAC 2 cut(s) 339, 752
XmnI GAANNNNTTC 2 cut(s) 1028, 1555
XspI CTAG 4 cut(s) 1209, 1499, 1659, 1754
ZrmI AGTACT 1 cut(s) 1042
Zsp2I ATGCAT 3 cut(s) 1176, 1309, 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.