SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0369051 |
| rosa_multiflora | Rmu_sc0004250.1_g000027 |
| rosa_roxburghii | Rroxscaffold_4G00288050 |
| rosa_samantha | Rh1AG354300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 28 |
| AcuI | CTGAAG | 1 cut(s) | 309 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 208 |
| AgsI | TTSAA | 1 cut(s) | 252 |
| AluBI | AGCT | 1 cut(s) | 306 |
| AluI | AGCT | 1 cut(s) | 306 |
| Alw26I | GTCTC | 2 cut(s) | 14, 88 |
| AoxI | GGCC | 1 cut(s) | 78 |
| ApoI | RAATTY | 1 cut(s) | 28 |
| AspLEI | GCGC | 1 cut(s) | 201 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 35, 68 |
| BccI | CCATC | 1 cut(s) | 28 |
| BceAI | ACGGC | 1 cut(s) | 159 |
| BcoDI | GTCTC | 2 cut(s) | 14, 88 |
| BfaI | CTAG | 1 cut(s) | 307 |
| BfoI | RGCGCY | 1 cut(s) | 202 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 30 |
| BpuEI | CTTGAG | 1 cut(s) | 103 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 208 |
| Bse3DI | GCAATG | 1 cut(s) | 285 |
| BseGI | GGATG | 1 cut(s) | 20 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 208 |
| BseMI | GCAATG | 1 cut(s) | 285 |
| BseMII | CTCAG | 1 cut(s) | 293 |
| BseRI | GAGGAG | 1 cut(s) | 6 |
| BshFI | GGCC | 1 cut(s) | 80 |
| BslFI | GGGAC | 2 cut(s) | 154, 225 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 208 |
| BsmAI | GTCTC | 2 cut(s) | 14, 88 |
| BsmBI | CGTCTC | 1 cut(s) | 88 |
| BsmFI | GGGAC | 2 cut(s) | 154, 225 |
| BsnI | GGCC | 1 cut(s) | 80 |
| BspANI | GGCC | 1 cut(s) | 80 |
| BspCNI | CTCAG | 1 cut(s) | 294 |
| BsrDI | GCAATG | 1 cut(s) | 285 |
| BstC8I | GCNNGC | 1 cut(s) | 121 |
| BstDEI | CTNAG | 1 cut(s) | 302 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 206 |
| BstF5I | GGATG | 1 cut(s) | 20 |
| BstH2I | RGCGCY | 1 cut(s) | 202 |
| BstHHI | GCGC | 1 cut(s) | 201 |
| BstMAI | GTCTC | 2 cut(s) | 14, 88 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 263 |
| BsuRI | GGCC | 1 cut(s) | 80 |
| BtsCI | GGATG | 1 cut(s) | 20 |
| Cac8I | GCNNGC | 1 cut(s) | 121 |
| CfoI | GCGC | 1 cut(s) | 201 |
| CviAII | CATG | 1 cut(s) | 65 |
| CviJI | RGCY | 5 cut(s) | 80, 123, 146, 223, 306 |
| CviKI_1 | RGCY | 5 cut(s) | 80, 123, 146, 223, 306 |
| DdeI | CTNAG | 1 cut(s) | 302 |
| Eco57I | CTGAAG | 1 cut(s) | 309 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 206 |
| EcoRI | GAATTC | 1 cut(s) | 28 |
| Esp3I | CGTCTC | 1 cut(s) | 88 |
| FaeI | CATG | 1 cut(s) | 68 |
| FaiI | YATR | 5 cut(s) | 66, 171, 182, 195, 233 |
| FaqI | GGGAC | 2 cut(s) | 154, 225 |
| FatI | CATG | 1 cut(s) | 64 |
| FokI | GGATG | 1 cut(s) | 7 |
| FspBI | CTAG | 1 cut(s) | 307 |
| GlaI | GCGC | 1 cut(s) | 200 |
| HaeII | RGCGCY | 1 cut(s) | 202 |
| HaeIII | GGCC | 1 cut(s) | 80 |
| HhaI | GCGC | 1 cut(s) | 201 |
| Hin1II | CATG | 1 cut(s) | 68 |
| Hin6I | GCGC | 1 cut(s) | 199 |
| HinP1I | GCGC | 1 cut(s) | 199 |
| HinfI | GANTC | 2 cut(s) | 7, 129 |
| Hpy166II | GTNNAC | 2 cut(s) | 54, 266 |
| Hpy8I | GTNNAC | 2 cut(s) | 54, 266 |
| Hpy99I | CGWCG | 1 cut(s) | 102 |
| HpyCH4V | TGCA | 2 cut(s) | 64, 278 |
| HpyF3I | CTNAG | 1 cut(s) | 302 |
| Hsp92II | CATG | 1 cut(s) | 68 |
| HspAI | GCGC | 1 cut(s) | 199 |
| LpnPI | CCDG | 4 cut(s) | 38, 137, 205, 269 |
| MaeI | CTAG | 1 cut(s) | 307 |
| MboII | GAAGA | 1 cut(s) | 16 |
| MluCI | AATT | 2 cut(s) | 28, 225 |
| MlyI | GAGTC | 1 cut(s) | 16 |
| MnlI | CCTC | 3 cut(s) | 24, 27, 202 |
| MseI | TTAA | 2 cut(s) | 71, 294 |
| NlaIII | CATG | 1 cut(s) | 68 |
| PfeI | GAWTC | 1 cut(s) | 129 |
| PleI | GAGTC | 1 cut(s) | 15 |
| PpsI | GAGTC | 1 cut(s) | 15 |
| SaqAI | TTAA | 2 cut(s) | 71, 294 |
| SchI | GAGTC | 1 cut(s) | 16 |
| SetI | ASST | 1 cut(s) | 308 |
| SmlI | CTYRAG | 1 cut(s) | 82 |
| SmoI | CTYRAG | 1 cut(s) | 82 |
| Sse9I | AATT | 2 cut(s) | 28, 225 |
| SspI | AATATT | 1 cut(s) | 60 |
| SspMI | CTAG | 1 cut(s) | 307 |
| TasI | AATT | 2 cut(s) | 28, 225 |
| TfiI | GAWTC | 1 cut(s) | 129 |
| Tru1I | TTAA | 2 cut(s) | 71, 294 |
| Tru9I | TTAA | 2 cut(s) | 71, 294 |
| TspDTI | ATGAA | 4 cut(s) | 17, 21, 186, 200 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 206 |
| XapI | RAATTY | 1 cut(s) | 28 |
| XspI | CTAG | 1 cut(s) | 307 |