zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0380461 |
| rosa_samantha | Rh1AG260500 Rh3BG097700 Rh5AG231300 Rh5AG445000 Rh5DG359900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 54 |
| AclWI | GGATC | 1 cut(s) | 205 |
| AflIII | ACRYGT | 1 cut(s) | 68 |
| AgsI | TTSAA | 2 cut(s) | 39, 149 |
| AjnI | CCWGG | 2 cut(s) | 57, 96 |
| AluBI | AGCT | 1 cut(s) | 113 |
| AluI | AGCT | 1 cut(s) | 113 |
| Alw26I | GTCTC | 1 cut(s) | 87 |
| AlwI | GGATC | 1 cut(s) | 205 |
| AoxI | GGCC | 1 cut(s) | 61 |
| ApeKI | GCWGC | 2 cut(s) | 107, 110 |
| AspS9I | GGNCC | 2 cut(s) | 4, 61 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BbsI | GAAGAC | 1 cut(s) | 26 |
| BbvI | GCAGC | 2 cut(s) | 119, 122 |
| BccI | CCATC | 1 cut(s) | 161 |
| BciT130I | CCWGG | 2 cut(s) | 59, 98 |
| BcoDI | GTCTC | 1 cut(s) | 87 |
| BfaI | CTAG | 2 cut(s) | 80, 159 |
| BisI | GCNGC | 2 cut(s) | 108, 111 |
| BlsI | GCNGC | 2 cut(s) | 109, 112 |
| Bme1390I | CCNGG | 2 cut(s) | 59, 98 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 61 |
| BmrFI | CCNGG | 2 cut(s) | 59, 98 |
| BpiI | GAAGAC | 1 cut(s) | 26 |
| BpmI | CTGGAG | 1 cut(s) | 119 |
| BpuEI | CTTGAG | 1 cut(s) | 31 |
| BsaI | GGTCTC | 1 cut(s) | 87 |
| BsaJI | CCNNGG | 1 cut(s) | 58 |
| BseBI | CCWGG | 2 cut(s) | 59, 98 |
| BseDI | CCNNGG | 1 cut(s) | 58 |
| BseXI | GCAGC | 2 cut(s) | 119, 122 |
| BsgI | GTGCAG | 1 cut(s) | 126 |
| BshFI | GGCC | 1 cut(s) | 63 |
| BsmAI | GTCTC | 1 cut(s) | 87 |
| BsnI | GGCC | 1 cut(s) | 63 |
| Bso31I | GGTCTC | 1 cut(s) | 87 |
| Bsp143I | GATC | 1 cut(s) | 197 |
| BspANI | GGCC | 1 cut(s) | 63 |
| BspPI | GGATC | 1 cut(s) | 205 |
| BspTNI | GGTCTC | 1 cut(s) | 87 |
| BssECI | CCNNGG | 1 cut(s) | 58 |
| BssMI | GATC | 1 cut(s) | 197 |
| Bst2UI | CCWGG | 2 cut(s) | 59, 98 |
| BstC8I | GCNNGC | 1 cut(s) | 132 |
| BstKTI | GATC | 1 cut(s) | 200 |
| BstMAI | GTCTC | 1 cut(s) | 87 |
| BstMBI | GATC | 1 cut(s) | 197 |
| BstNI | CCWGG | 2 cut(s) | 59, 98 |
| BstNSI | RCATGY | 1 cut(s) | 72 |
| BstSCI | CCNGG | 2 cut(s) | 57, 96 |
| BstV1I | GCAGC | 2 cut(s) | 119, 122 |
| BstV2I | GAAGAC | 1 cut(s) | 26 |
| BsuRI | GGCC | 1 cut(s) | 63 |
| Cac8I | GCNNGC | 1 cut(s) | 132 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 61 |
| CviAII | CATG | 2 cut(s) | 69, 201 |
| CviJI | RGCY | 3 cut(s) | 63, 113, 134 |
| CviKI_1 | RGCY | 3 cut(s) | 63, 113, 134 |
| DpnI | GATC | 1 cut(s) | 199 |
| DpnII | GATC | 1 cut(s) | 197 |
| Eco31I | GGTCTC | 1 cut(s) | 87 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| EcoRII | CCWGG | 2 cut(s) | 57, 96 |
| FaeI | CATG | 2 cut(s) | 72, 204 |
| FaiI | YATR | 6 cut(s) | 70, 120, 164, 173, 180, 202 |
| FatI | CATG | 2 cut(s) | 68, 200 |
| FblI | GTMKAC | 1 cut(s) | 54 |
| Fnu4HI | GCNGC | 2 cut(s) | 108, 111 |
| Fsp4HI | GCNGC | 2 cut(s) | 108, 111 |
| FspBI | CTAG | 2 cut(s) | 80, 159 |
| GluI | GCNGC | 2 cut(s) | 108, 111 |
| GsuI | CTGGAG | 1 cut(s) | 119 |
| HaeIII | GGCC | 1 cut(s) | 63 |
| Hin1II | CATG | 2 cut(s) | 72, 204 |
| Hpy166II | GTNNAC | 2 cut(s) | 55, 74 |
| Hpy8I | GTNNAC | 2 cut(s) | 55, 74 |
| HpyCH4V | TGCA | 1 cut(s) | 107 |
| Hsp92II | CATG | 2 cut(s) | 72, 204 |
| Kzo9I | GATC | 1 cut(s) | 197 |
| LpnPI | CCDG | 7 cut(s) | 20, 44, 71, 71, 83, 110, 116 |
| Lsp1109I | GCAGC | 2 cut(s) | 119, 122 |
| MaeI | CTAG | 2 cut(s) | 80, 159 |
| MalI | GATC | 1 cut(s) | 199 |
| MboI | GATC | 1 cut(s) | 197 |
| MboII | GAAGA | 1 cut(s) | 31 |
| MmeI | TCCRAC | 1 cut(s) | 175 |
| MnlI | CCTC | 4 cut(s) | 40, 55, 94, 166 |
| MspR9I | CCNGG | 2 cut(s) | 59, 98 |
| MvaI | CCWGG | 2 cut(s) | 59, 98 |
| NdeII | GATC | 1 cut(s) | 197 |
| NlaIII | CATG | 2 cut(s) | 72, 204 |
| NspI | RCATGY | 1 cut(s) | 72 |
| PciI | ACATGT | 1 cut(s) | 68 |
| PkrI | GCNGC | 2 cut(s) | 109, 112 |
| PscI | ACATGT | 1 cut(s) | 68 |
| Psp6I | CCWGG | 2 cut(s) | 57, 96 |
| PspGI | CCWGG | 2 cut(s) | 57, 96 |
| PspPI | GGNCC | 2 cut(s) | 4, 61 |
| SatI | GCNGC | 2 cut(s) | 108, 111 |
| Sau3AI | GATC | 1 cut(s) | 197 |
| Sau96I | GGNCC | 2 cut(s) | 4, 61 |
| ScrFI | CCNGG | 2 cut(s) | 59, 98 |
| SetI | ASST | 4 cut(s) | 60, 99, 115, 158 |
| SinI | GGWCC | 1 cut(s) | 4 |
| SmlI | CTYRAG | 1 cut(s) | 46 |
| SmoI | CTYRAG | 1 cut(s) | 46 |
| SspMI | CTAG | 2 cut(s) | 80, 159 |
| StyD4I | CCNGG | 2 cut(s) | 57, 96 |
| TseI | GCWGC | 2 cut(s) | 107, 110 |
| TspDTI | ATGAA | 1 cut(s) | 126 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XceI | RCATGY | 1 cut(s) | 72 |
| XmiI | GTMKAC | 1 cut(s) | 54 |
| XspI | CTAG | 2 cut(s) | 80, 159 |