No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0380461 |
| rosa_samantha | Rh1AG260500 Rh3BG097700 Rh5AG231300 Rh5AG445000 Rh5DG359900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 190 |
| AfaI | GTAC | 1 cut(s) | 272 |
| AgsI | TTSAA | 2 cut(s) | 18, 57 |
| AjnI | CCWGG | 1 cut(s) | 78 |
| AluBI | AGCT | 2 cut(s) | 279, 296 |
| AluI | AGCT | 2 cut(s) | 279, 296 |
| Alw26I | GTCTC | 3 cut(s) | 69, 147, 172 |
| AlwI | GGATC | 1 cut(s) | 190 |
| AsuHPI | GGTGA | 1 cut(s) | 241 |
| AsuII | TTCGAA | 1 cut(s) | 196 |
| AsuNHI | GCTAGC | 1 cut(s) | 296 |
| BccI | CCATC | 2 cut(s) | 106, 163 |
| BciT130I | CCWGG | 1 cut(s) | 80 |
| BcoDI | GTCTC | 3 cut(s) | 69, 147, 172 |
| BfaI | CTAG | 1 cut(s) | 297 |
| BfmI | CTRYAG | 1 cut(s) | 48 |
| BglII | AGATCT | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 1 cut(s) | 80 |
| BmiI | GGNNCC | 1 cut(s) | 117 |
| BmrFI | CCNGG | 1 cut(s) | 80 |
| BmsI | GCATC | 1 cut(s) | 76 |
| BmtI | GCTAGC | 1 cut(s) | 300 |
| Bpu14I | TTCGAA | 1 cut(s) | 196 |
| BpuEI | CTTGAG | 1 cut(s) | 162 |
| BsaI | GGTCTC | 1 cut(s) | 69 |
| Bse1I | ACTGG | 1 cut(s) | 11 |
| BseBI | CCWGG | 1 cut(s) | 80 |
| BseNI | ACTGG | 1 cut(s) | 11 |
| Bsh1285I | CGRYCG | 1 cut(s) | 215 |
| BsiEI | CGRYCG | 1 cut(s) | 215 |
| BsmAI | GTCTC | 3 cut(s) | 69, 147, 172 |
| BsmI | GAATGC | 1 cut(s) | 150 |
| Bso31I | GGTCTC | 1 cut(s) | 69 |
| Bsp119I | TTCGAA | 1 cut(s) | 196 |
| Bsp143I | GATC | 3 cut(s) | 98, 182, 212 |
| BspHI | TCATGA | 1 cut(s) | 127 |
| BspLI | GGNNCC | 1 cut(s) | 117 |
| BspOI | GCTAGC | 1 cut(s) | 300 |
| BspPI | GGATC | 1 cut(s) | 190 |
| BspT104I | TTCGAA | 1 cut(s) | 196 |
| BspTNI | GGTCTC | 1 cut(s) | 69 |
| BsrI | ACTGG | 1 cut(s) | 11 |
| BssMI | GATC | 3 cut(s) | 98, 182, 212 |
| Bst2UI | CCWGG | 1 cut(s) | 80 |
| Bst4CI | ACNGT | 1 cut(s) | 254 |
| BstBI | TTCGAA | 1 cut(s) | 196 |
| BstC8I | GCNNGC | 2 cut(s) | 137, 298 |
| BstDEI | CTNAG | 1 cut(s) | 102 |
| BstKTI | GATC | 3 cut(s) | 101, 185, 215 |
| BstMAI | GTCTC | 3 cut(s) | 69, 147, 172 |
| BstMBI | GATC | 3 cut(s) | 98, 182, 212 |
| BstMCI | CGRYCG | 1 cut(s) | 215 |
| BstNI | CCWGG | 1 cut(s) | 80 |
| BstSCI | CCNGG | 1 cut(s) | 78 |
| BstSFI | CTRYAG | 1 cut(s) | 48 |
| BstX2I | RGATCY | 2 cut(s) | 98, 182 |
| BstYI | RGATCY | 2 cut(s) | 98, 182 |
| BtsIMutI | CAGTG | 2 cut(s) | 228, 259 |
| Cac8I | GCNNGC | 2 cut(s) | 137, 298 |
| CciI | TCATGA | 1 cut(s) | 127 |
| Csp6I | GTAC | 1 cut(s) | 271 |
| CviAII | CATG | 3 cut(s) | 68, 128, 274 |
| CviJI | RGCY | 2 cut(s) | 279, 296 |
| CviKI_1 | RGCY | 2 cut(s) | 279, 296 |
| CviQI | GTAC | 1 cut(s) | 271 |
| DdeI | CTNAG | 1 cut(s) | 102 |
| DpnI | GATC | 3 cut(s) | 100, 184, 214 |
| DpnII | GATC | 3 cut(s) | 98, 182, 212 |
| Eco31I | GGTCTC | 1 cut(s) | 69 |
| EcoRII | CCWGG | 1 cut(s) | 78 |
| FaeI | CATG | 3 cut(s) | 71, 131, 277 |
| FaiI | YATR | 6 cut(s) | 12, 27, 50, 69, 129, 275 |
| FatI | CATG | 3 cut(s) | 67, 127, 273 |
| FspBI | CTAG | 1 cut(s) | 297 |
| Hin1II | CATG | 3 cut(s) | 71, 131, 277 |
| HincII | GTYRAC | 1 cut(s) | 64 |
| HindII | GTYRAC | 1 cut(s) | 64 |
| HphI | GGTGA | 1 cut(s) | 241 |
| Hpy166II | GTNNAC | 1 cut(s) | 64 |
| Hpy188III | TCNNGA | 3 cut(s) | 38, 128, 210 |
| Hpy8I | GTNNAC | 1 cut(s) | 64 |
| HpyCH4III | ACNGT | 1 cut(s) | 254 |
| HpyCH4V | TGCA | 3 cut(s) | 89, 135, 150 |
| HpyF3I | CTNAG | 1 cut(s) | 102 |
| Hsp92II | CATG | 3 cut(s) | 71, 131, 277 |
| Kzo9I | GATC | 3 cut(s) | 98, 182, 212 |
| LpnPI | CCDG | 3 cut(s) | 65, 92, 144 |
| LweI | GCATC | 1 cut(s) | 76 |
| MaeI | CTAG | 1 cut(s) | 297 |
| MaeIII | GTNAC | 1 cut(s) | 248 |
| MalI | GATC | 3 cut(s) | 100, 184, 214 |
| MboI | GATC | 3 cut(s) | 98, 182, 212 |
| MboII | GAAGA | 1 cut(s) | 95 |
| MflI | RGATCY | 2 cut(s) | 98, 182 |
| MluCI | AATT | 4 cut(s) | 13, 123, 192, 204 |
| MnlI | CCTC | 3 cut(s) | 219, 261, 298 |
| MspR9I | CCNGG | 1 cut(s) | 80 |
| Mva1269I | GAATGC | 1 cut(s) | 150 |
| MvaI | CCWGG | 1 cut(s) | 80 |
| NdeII | GATC | 3 cut(s) | 98, 182, 212 |
| NheI | GCTAGC | 1 cut(s) | 296 |
| NlaIII | CATG | 3 cut(s) | 71, 131, 277 |
| NlaIV | GGNNCC | 1 cut(s) | 117 |
| NspV | TTCGAA | 1 cut(s) | 196 |
| PagI | TCATGA | 1 cut(s) | 127 |
| PctI | GAATGC | 1 cut(s) | 150 |
| Ple19I | CGATCG | 1 cut(s) | 215 |
| Psp6I | CCWGG | 1 cut(s) | 78 |
| PspGI | CCWGG | 1 cut(s) | 78 |
| PspN4I | GGNNCC | 1 cut(s) | 117 |
| PsuI | RGATCY | 2 cut(s) | 98, 182 |
| PvuI | CGATCG | 1 cut(s) | 215 |
| RsaI | GTAC | 1 cut(s) | 272 |
| RsaNI | GTAC | 1 cut(s) | 271 |
| Sau3AI | GATC | 3 cut(s) | 98, 182, 212 |
| ScrFI | CCNGG | 1 cut(s) | 80 |
| SetI | ASST | 5 cut(s) | 55, 81, 272, 281, 298 |
| SfaNI | GCATC | 1 cut(s) | 76 |
| SfcI | CTRYAG | 1 cut(s) | 48 |
| SfuI | TTCGAA | 1 cut(s) | 196 |
| SmlI | CTYRAG | 1 cut(s) | 177 |
| SmoI | CTYRAG | 1 cut(s) | 177 |
| Sse9I | AATT | 4 cut(s) | 13, 123, 192, 204 |
| SspMI | CTAG | 1 cut(s) | 297 |
| StyD4I | CCNGG | 1 cut(s) | 78 |
| TaaI | ACNGT | 1 cut(s) | 254 |
| TaqI | TCGA | 2 cut(s) | 39, 196 |
| TasI | AATT | 4 cut(s) | 13, 123, 192, 204 |
| TscAI | CASTG | 2 cut(s) | 228, 259 |
| TspDTI | ATGAA | 2 cut(s) | 17, 116 |
| TspRI | CASTG | 2 cut(s) | 228, 259 |
| XspI | CTAG | 1 cut(s) | 297 |