DNA RNA polymerases superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0324581 |
| rosa_laevigata | RLG00000030188 |
| rosa_roxburghii | Rroxscaffold_4G00325370 |
| rosa_wichuraiana | Rw1G005310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 75 |
| AfaI | GTAC | 2 cut(s) | 85, 254 |
| AgsI | TTSAA | 1 cut(s) | 259 |
| AlwI | GGATC | 1 cut(s) | 75 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 11, 43 |
| AsuII | TTCGAA | 1 cut(s) | 234 |
| BccI | CCATC | 2 cut(s) | 143, 263 |
| BmcAI | AGTACT | 1 cut(s) | 254 |
| BmsI | GCATC | 1 cut(s) | 150 |
| BpmI | CTGGAG | 1 cut(s) | 114 |
| Bpu14I | TTCGAA | 1 cut(s) | 234 |
| BsaJI | CCNNGG | 1 cut(s) | 157 |
| Bse118I | RCCGGY | 1 cut(s) | 108 |
| Bse1I | ACTGG | 1 cut(s) | 192 |
| BseDI | CCNNGG | 1 cut(s) | 157 |
| BseMII | CTCAG | 1 cut(s) | 159 |
| BseNI | ACTGG | 1 cut(s) | 192 |
| BsiSI | CCGG | 1 cut(s) | 109 |
| Bsp119I | TTCGAA | 1 cut(s) | 234 |
| Bsp143I | GATC | 1 cut(s) | 67 |
| BspCNI | CTCAG | 1 cut(s) | 158 |
| BspPI | GGATC | 1 cut(s) | 75 |
| BspT104I | TTCGAA | 1 cut(s) | 234 |
| BsrFI | RCCGGY | 1 cut(s) | 108 |
| BsrI | ACTGG | 1 cut(s) | 192 |
| BssAI | RCCGGY | 1 cut(s) | 108 |
| BssECI | CCNNGG | 1 cut(s) | 157 |
| BssMI | GATC | 1 cut(s) | 67 |
| BssT1I | CCWWGG | 1 cut(s) | 157 |
| Bst4CI | ACNGT | 1 cut(s) | 62 |
| Bst6I | CTCTTC | 1 cut(s) | 215 |
| BstBI | TTCGAA | 1 cut(s) | 234 |
| BstDEI | CTNAG | 1 cut(s) | 145 |
| BstKTI | GATC | 1 cut(s) | 70 |
| BstMBI | GATC | 1 cut(s) | 67 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 120 |
| BstNSI | RCATGY | 1 cut(s) | 178 |
| Cfr10I | RCCGGY | 1 cut(s) | 108 |
| Csp6I | GTAC | 2 cut(s) | 84, 253 |
| CviAII | CATG | 4 cut(s) | 42, 115, 138, 175 |
| CviJI | RGCY | 1 cut(s) | 123 |
| CviKI_1 | RGCY | 1 cut(s) | 123 |
| CviQI | GTAC | 2 cut(s) | 84, 253 |
| DdeI | CTNAG | 1 cut(s) | 145 |
| DpnI | GATC | 1 cut(s) | 69 |
| DpnII | GATC | 1 cut(s) | 67 |
| Eam1104I | CTCTTC | 1 cut(s) | 215 |
| EarI | CTCTTC | 1 cut(s) | 215 |
| Eco130I | CCWWGG | 1 cut(s) | 157 |
| EcoT14I | CCWWGG | 1 cut(s) | 157 |
| EcoT22I | ATGCAT | 1 cut(s) | 143 |
| ErhI | CCWWGG | 1 cut(s) | 157 |
| FaeI | CATG | 4 cut(s) | 45, 118, 141, 178 |
| FaiI | YATR | 9 cut(s) | 43, 54, 116, 139, 164, 170, 176, 208, 283 |
| FatI | CATG | 4 cut(s) | 41, 114, 137, 174 |
| GsuI | CTGGAG | 1 cut(s) | 114 |
| HapII | CCGG | 1 cut(s) | 109 |
| Hin1II | CATG | 4 cut(s) | 45, 118, 141, 178 |
| HpaII | CCGG | 1 cut(s) | 109 |
| Hpy188I | TCNGA | 1 cut(s) | 148 |
| Hpy188III | TCNNGA | 1 cut(s) | 93 |
| HpyAV | CCTTC | 1 cut(s) | 219 |
| HpyCH4III | ACNGT | 1 cut(s) | 62 |
| HpyCH4V | TGCA | 3 cut(s) | 45, 114, 141 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 120 |
| HpyF3I | CTNAG | 1 cut(s) | 145 |
| Hsp92II | CATG | 4 cut(s) | 45, 118, 141, 178 |
| Kzo9I | GATC | 1 cut(s) | 67 |
| LpnPI | CCDG | 4 cut(s) | 78, 105, 122, 173 |
| LweI | GCATC | 1 cut(s) | 150 |
| MaeIII | GTNAC | 2 cut(s) | 27, 98 |
| MalI | GATC | 1 cut(s) | 69 |
| MboI | GATC | 1 cut(s) | 67 |
| MboII | GAAGA | 2 cut(s) | 34, 232 |
| MmeI | TCCRAC | 1 cut(s) | 172 |
| MnlI | CCTC | 1 cut(s) | 89 |
| Mph1103I | ATGCAT | 1 cut(s) | 143 |
| MspI | CCGG | 1 cut(s) | 109 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 120 |
| NdeII | GATC | 1 cut(s) | 67 |
| NlaIII | CATG | 4 cut(s) | 45, 118, 141, 178 |
| NmuCI | GTSAC | 1 cut(s) | 27 |
| NsiI | ATGCAT | 1 cut(s) | 143 |
| NspI | RCATGY | 1 cut(s) | 178 |
| NspV | TTCGAA | 1 cut(s) | 234 |
| RsaI | GTAC | 2 cut(s) | 85, 254 |
| RsaNI | GTAC | 2 cut(s) | 84, 253 |
| Sau3AI | GATC | 1 cut(s) | 67 |
| ScaI | AGTACT | 1 cut(s) | 254 |
| SetI | ASST | 2 cut(s) | 100, 163 |
| SfaNI | GCATC | 1 cut(s) | 150 |
| SfuI | TTCGAA | 1 cut(s) | 234 |
| StyI | CCWWGG | 1 cut(s) | 157 |
| TaaI | ACNGT | 1 cut(s) | 62 |
| TaqI | TCGA | 1 cut(s) | 234 |
| TatI | WGTACW | 1 cut(s) | 252 |
| TseFI | GTSAC | 1 cut(s) | 27 |
| Tsp45I | GTSAC | 1 cut(s) | 27 |
| TspDTI | ATGAA | 3 cut(s) | 30, 78, 233 |
| XceI | RCATGY | 1 cut(s) | 178 |
| ZrmI | AGTACT | 1 cut(s) | 254 |
| Zsp2I | ATGCAT | 1 cut(s) | 143 |