Belongs to the ClpA ClpB family
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0330831 |
| rosa_samantha | Rh1AG111700 Rh1CG106000 Rh1DG114900 Rh1DG115900 Rh6CG147000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 131 |
| AfaI | GTAC | 1 cut(s) | 220 |
| AluBI | AGCT | 4 cut(s) | 130, 149, 157, 255 |
| AluI | AGCT | 4 cut(s) | 130, 149, 157, 255 |
| Alw26I | GTCTC | 1 cut(s) | 56 |
| AsuC2I | CCSGG | 1 cut(s) | 95 |
| BcnI | CCSGG | 1 cut(s) | 95 |
| BcoDI | GTCTC | 1 cut(s) | 56 |
| BglII | AGATCT | 1 cut(s) | 38 |
| Bme1390I | CCNGG | 1 cut(s) | 95 |
| BmrFI | CCNGG | 1 cut(s) | 95 |
| BmrI | ACTGGG | 1 cut(s) | 195 |
| BmsI | GCATC | 1 cut(s) | 248 |
| BmuI | ACTGGG | 1 cut(s) | 195 |
| BpuMI | CCSGG | 1 cut(s) | 95 |
| Bse1I | ACTGG | 1 cut(s) | 201 |
| Bse3DI | GCAATG | 1 cut(s) | 266 |
| BseGI | GGATG | 1 cut(s) | 239 |
| BseMI | GCAATG | 1 cut(s) | 266 |
| BseNI | ACTGG | 1 cut(s) | 201 |
| BsiSI | CCGG | 1 cut(s) | 94 |
| BsmAI | GTCTC | 1 cut(s) | 56 |
| Bsp143I | GATC | 3 cut(s) | 38, 72, 178 |
| BspHI | TCATGA | 1 cut(s) | 284 |
| BsrDI | GCAATG | 1 cut(s) | 266 |
| BsrI | ACTGG | 1 cut(s) | 201 |
| BssMI | GATC | 3 cut(s) | 38, 72, 178 |
| Bst4CI | ACNGT | 3 cut(s) | 58, 223, 278 |
| BstC8I | GCNNGC | 1 cut(s) | 197 |
| BstDEI | CTNAG | 1 cut(s) | 245 |
| BstF5I | GGATG | 1 cut(s) | 239 |
| BstKTI | GATC | 3 cut(s) | 41, 75, 181 |
| BstMAI | GTCTC | 1 cut(s) | 56 |
| BstMBI | GATC | 3 cut(s) | 38, 72, 178 |
| BstSCI | CCNGG | 1 cut(s) | 93 |
| BstX2I | RGATCY | 1 cut(s) | 38 |
| BstYI | RGATCY | 1 cut(s) | 38 |
| BtsCI | GGATG | 1 cut(s) | 239 |
| BtsIMutI | CAGTG | 1 cut(s) | 274 |
| Cac8I | GCNNGC | 1 cut(s) | 197 |
| CciI | TCATGA | 1 cut(s) | 284 |
| Csp6I | GTAC | 1 cut(s) | 219 |
| CviAII | CATG | 1 cut(s) | 285 |
| CviJI | RGCY | 7 cut(s) | 21, 109, 130, 149, 157, 199, 255 |
| CviKI_1 | RGCY | 7 cut(s) | 21, 109, 130, 149, 157, 199, 255 |
| CviQI | GTAC | 1 cut(s) | 219 |
| DdeI | CTNAG | 1 cut(s) | 245 |
| DpnI | GATC | 3 cut(s) | 40, 74, 180 |
| DpnII | GATC | 3 cut(s) | 38, 72, 178 |
| Eco57I | CTGAAG | 1 cut(s) | 131 |
| EcoT22I | ATGCAT | 1 cut(s) | 241 |
| FaeI | CATG | 1 cut(s) | 288 |
| FaiI | YATR | 4 cut(s) | 105, 138, 229, 286 |
| FatI | CATG | 1 cut(s) | 284 |
| FokI | GGATG | 1 cut(s) | 226 |
| HapII | CCGG | 1 cut(s) | 94 |
| Hin1II | CATG | 1 cut(s) | 288 |
| HincII | GTYRAC | 1 cut(s) | 54 |
| HindII | GTYRAC | 1 cut(s) | 54 |
| HpaII | CCGG | 1 cut(s) | 94 |
| Hpy166II | GTNNAC | 1 cut(s) | 54 |
| Hpy188I | TCNGA | 1 cut(s) | 183 |
| Hpy188III | TCNNGA | 2 cut(s) | 209, 285 |
| Hpy8I | GTNNAC | 1 cut(s) | 54 |
| HpyCH4III | ACNGT | 3 cut(s) | 58, 223, 278 |
| HpyCH4V | TGCA | 2 cut(s) | 27, 239 |
| HpyF3I | CTNAG | 1 cut(s) | 245 |
| Hsp92II | CATG | 1 cut(s) | 288 |
| Kzo9I | GATC | 3 cut(s) | 38, 72, 178 |
| LmnI | GCTCC | 3 cut(s) | 154, 192, 260 |
| LpnPI | CCDG | 4 cut(s) | 31, 53, 107, 214 |
| LweI | GCATC | 1 cut(s) | 248 |
| MaeIII | GTNAC | 3 cut(s) | 43, 223, 248 |
| MalI | GATC | 3 cut(s) | 40, 74, 180 |
| MboI | GATC | 3 cut(s) | 38, 72, 178 |
| MboII | GAAGA | 2 cut(s) | 71, 74 |
| MflI | RGATCY | 1 cut(s) | 38 |
| MluCI | AATT | 1 cut(s) | 167 |
| MnlI | CCTC | 1 cut(s) | 205 |
| Mph1103I | ATGCAT | 1 cut(s) | 241 |
| MspI | CCGG | 1 cut(s) | 94 |
| MspR9I | CCNGG | 1 cut(s) | 95 |
| NciI | CCSGG | 1 cut(s) | 95 |
| NdeII | GATC | 3 cut(s) | 38, 72, 178 |
| NlaIII | CATG | 1 cut(s) | 288 |
| NmuCI | GTSAC | 1 cut(s) | 223 |
| NsiI | ATGCAT | 1 cut(s) | 241 |
| PagI | TCATGA | 1 cut(s) | 284 |
| PsuI | RGATCY | 1 cut(s) | 38 |
| RsaI | GTAC | 1 cut(s) | 220 |
| RsaNI | GTAC | 1 cut(s) | 219 |
| Sau3AI | GATC | 3 cut(s) | 38, 72, 178 |
| ScrFI | CCNGG | 1 cut(s) | 95 |
| SetI | ASST | 4 cut(s) | 132, 151, 159, 257 |
| SfaNI | GCATC | 1 cut(s) | 248 |
| SgeI | CNNG | 9 cut(s) | 30, 80, 106, 107, 139, 173, 208, 213, 221 |
| Sse9I | AATT | 1 cut(s) | 167 |
| StyD4I | CCNGG | 1 cut(s) | 93 |
| TaaI | ACNGT | 3 cut(s) | 58, 223, 278 |
| TaqI | TCGA | 2 cut(s) | 85, 126 |
| TasI | AATT | 1 cut(s) | 167 |
| TatI | WGTACW | 1 cut(s) | 218 |
| TscAI | CASTG | 1 cut(s) | 281 |
| TseFI | GTSAC | 1 cut(s) | 223 |
| Tsp45I | GTSAC | 1 cut(s) | 223 |
| TspDTI | ATGAA | 1 cut(s) | 122 |
| TspGWI | ACGGA | 1 cut(s) | 247 |
| TspRI | CASTG | 1 cut(s) | 281 |
| Zsp2I | ATGCAT | 1 cut(s) | 241 |