Basic Information
Type: gene
Physical Location & Seq
Reverse (-)
53473293 .. 53473881
PRQ58643
Length: 228 bp
ATGAGCTGCGGCGACTTCATTGTTCCGCCGGGATACCGATTCCATCCCACCGACGAGAGGCTGCTTAGCGACTTGGAGGACAAGAATCAGTGCAAGGACTCCGAGAACCCCACCACCATCCCTGTTATCGAGATGTGCAAGCACGAGCCTCACGAGTTACCAGACAGGAGAGAGAGGGGTGGGGTTAAAATACTGCATCATCAATGCCAAGTTTGTATCTTTGTGTAG
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
5.63
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| NAM |
PF02365 |
9 - 59 |
4.3e-09 |
No apical meristem (NAM) protein |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0024758)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AciI |
CCGC |
2 cut(s)
|
9, 26 |
| AfiI |
CCNNNNNNNGG |
1 cut(s)
|
57 |
| AluBI |
AGCT |
1 cut(s)
|
6 |
| AluI |
AGCT |
1 cut(s)
|
6 |
| ApeKI |
GCWGC |
2 cut(s)
|
6, 61 |
| AsuC2I |
CCSGG |
1 cut(s)
|
30 |
| BauI |
CACGAG |
2 cut(s)
|
143, 152 |
| BbvI |
GCAGC |
1 cut(s)
|
48 |
| BccI |
CCATC |
2 cut(s)
|
51, 125 |
| BciVI |
GTATCC |
1 cut(s)
|
26 |
| BcnI |
CCSGG |
1 cut(s)
|
30 |
| BfuI |
GTATCC |
1 cut(s)
|
26 |
| BisI |
GCNGC |
3 cut(s)
|
7, 10, 62 |
| BlpI |
GCTNAGC |
1 cut(s)
|
65 |
| BlsI |
GCNGC |
3 cut(s)
|
8, 11, 63 |
| Bme1390I |
CCNGG |
1 cut(s)
|
30 |
| BmrFI |
CCNGG |
1 cut(s)
|
30 |
| BmsI |
GCATC |
1 cut(s)
|
205 |
| Bpu1102I |
GCTNAGC |
1 cut(s)
|
65 |
| BpuMI |
CCSGG |
1 cut(s)
|
30 |
| Bsc4I |
CCNNNNNNNGG |
1 cut(s)
|
57 |
| BseGI |
GGATG |
2 cut(s)
|
43, 117 |
| BseLI |
CCNNNNNNNGG |
1 cut(s)
|
57 |
| BseXI |
GCAGC |
1 cut(s)
|
48 |
| BsiSI |
CCGG |
1 cut(s)
|
29 |
| BslI |
CCNNNNNNNGG |
1 cut(s)
|
57 |
| Bsp1720I |
GCTNAGC |
1 cut(s)
|
65 |
| BspACI |
CCGC |
2 cut(s)
|
9, 26 |
| BssSI |
CACGAG |
2 cut(s)
|
143, 152 |
| Bst2BI |
CACGAG |
2 cut(s)
|
143, 152 |
| BstC8I |
GCNNGC |
1 cut(s)
|
140 |
| BstDEI |
CTNAG |
1 cut(s)
|
65 |
| BstF5I |
GGATG |
2 cut(s)
|
43, 117 |
| BstSCI |
CCNGG |
1 cut(s)
|
28 |
| BstV1I |
GCAGC |
1 cut(s)
|
48 |
| BsuI |
GTATCC |
1 cut(s)
|
26 |
| BtsCI |
GGATG |
2 cut(s)
|
43, 117 |
| BtsIMutI |
CAGTG |
1 cut(s)
|
95 |
| Cac8I |
GCNNGC |
1 cut(s)
|
140 |
| CviJI |
RGCY |
3 cut(s)
|
6, 61, 148 |
| CviKI_1 |
RGCY |
3 cut(s)
|
6, 61, 148 |
| DdeI |
CTNAG |
1 cut(s)
|
65 |
| EciI |
GGCGGA |
1 cut(s)
|
15 |
| Fnu4HI |
GCNGC |
3 cut(s)
|
7, 10, 62 |
| FokI |
GGATG |
2 cut(s)
|
30, 104 |
| Fsp4HI |
GCNGC |
3 cut(s)
|
7, 10, 62 |
| GluI |
GCNGC |
3 cut(s)
|
7, 10, 62 |
| HapII |
CCGG |
1 cut(s)
|
29 |
| HinfI |
GANTC |
3 cut(s)
|
39, 85, 98 |
| HpaII |
CCGG |
1 cut(s)
|
29 |
| Hpy188I |
TCNGA |
1 cut(s)
|
103 |
| Hpy188III |
TCNNGA |
2 cut(s)
|
130, 152 |
| Hpy99I |
CGWCG |
1 cut(s)
|
56 |
| HpyCH4V |
TGCA |
3 cut(s)
|
93, 138, 196 |
| HpyF3I |
CTNAG |
1 cut(s)
|
65 |
| LpnPI |
CCDG |
4 cut(s)
|
42, 135, 151, 174 |
| Lsp1109I |
GCAGC |
1 cut(s)
|
48 |
| LweI |
GCATC |
1 cut(s)
|
205 |
| MaeIII |
GTNAC |
1 cut(s)
|
156 |
| MlyI |
GAGTC |
1 cut(s)
|
92 |
| MnlI |
CCTC |
4 cut(s)
|
51, 70, 159, 168 |
| MseI |
TTAA |
1 cut(s)
|
186 |
| MspI |
CCGG |
1 cut(s)
|
29 |
| MspR9I |
CCNGG |
1 cut(s)
|
30 |
| NciI |
CCSGG |
1 cut(s)
|
30 |
| PcsI |
WCGNNNNNNNCGW |
1 cut(s)
|
150 |
| PfeI |
GAWTC |
2 cut(s)
|
39, 85 |
| PkrI |
GCNGC |
3 cut(s)
|
8, 11, 63 |
| PleI |
GAGTC |
1 cut(s)
|
92 |
| PpsI |
GAGTC |
1 cut(s)
|
92 |
| SaqAI |
TTAA |
1 cut(s)
|
186 |
| SatI |
GCNGC |
3 cut(s)
|
7, 10, 62 |
| SchI |
GAGTC |
1 cut(s)
|
92 |
| ScrFI |
CCNGG |
1 cut(s)
|
30 |
| SetI |
ASST |
1 cut(s)
|
8 |
| SfaNI |
GCATC |
1 cut(s)
|
205 |
| SsiI |
CCGC |
2 cut(s)
|
9, 26 |
| StyD4I |
CCNGG |
1 cut(s)
|
28 |
| TaqI |
TCGA |
1 cut(s)
|
129 |
| TauI |
GCSGC |
1 cut(s)
|
12 |
| TfiI |
GAWTC |
2 cut(s)
|
39, 85 |
| Tru1I |
TTAA |
1 cut(s)
|
186 |
| Tru9I |
TTAA |
1 cut(s)
|
186 |
| TscAI |
CASTG |
1 cut(s)
|
95 |
| TseI |
GCWGC |
2 cut(s)
|
6, 61 |
| TspDTI |
ATGAA |
1 cut(s)
|
7 |
| TspRI |
CASTG |
1 cut(s)
|
95 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.