RchiOBHm_Chr2g0104301

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
15685576 .. 15685806
231 bp
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UTR
Exon/CDS
Intron
PRQ47857

Sequence Viewer

Length: 231 bp
ATGTCCCTGCATAGAGAAACTGAAGAGAAAGTGCAGAGAGAAAAAGAAGCCTCAATTGATAAGCATGAATGTTTGAAATGGCCTGATTCAAAGAAACCAGATTCAGTTGTGTATGTCTGTTTTGAGAGTGTGGCCAAATTCAATTCCACTCAGCTCAAGGAGATTGAAATGACTCTAGAAGCTGCTGGGCAGGACTTCTTTTGCATGGTGAAGAAAGGCAAAGATGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

76

Amino Acids

8.84

Weight (kDa)

5.42

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0022642)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 132
AcsI RAATTY 1 cut(s) 137
AcuI CTGAAG 1 cut(s) 42
AgsI TTSAA 4 cut(s) 76, 90, 142, 167
AluBI AGCT 2 cut(s) 154, 182
AluI AGCT 2 cut(s) 154, 182
AoxI GGCC 2 cut(s) 80, 132
ApeKI GCWGC 1 cut(s) 182
ApoI RAATTY 1 cut(s) 137
AsuHPI GGTGA 1 cut(s) 220
BalI TGGCCA 1 cut(s) 134
BbvI GCAGC 1 cut(s) 169
BfaI CTAG 1 cut(s) 176
BisI GCNGC 1 cut(s) 183
BlsI GCNGC 1 cut(s) 184
BpuEI CTTGAG 1 cut(s) 140
BseMII CTCAG 1 cut(s) 164
BseXI GCAGC 1 cut(s) 169
BseYI CCCAGC 1 cut(s) 185
BsgI GTGCAG 1 cut(s) 53
BshFI GGCC 2 cut(s) 82, 134
BsnI GGCC 2 cut(s) 82, 134
BspANI GGCC 2 cut(s) 82, 134
BspCNI CTCAG 1 cut(s) 163
Bst6I CTCTTC 1 cut(s) 18
BstDEI CTNAG 1 cut(s) 150
BstV1I GCAGC 1 cut(s) 169
BsuRI GGCC 2 cut(s) 82, 134
CviAII CATG 2 cut(s) 65, 205
CviJI RGCY 5 cut(s) 50, 82, 134, 154, 182
CviKI_1 RGCY 5 cut(s) 50, 82, 134, 154, 182
DdeI CTNAG 1 cut(s) 150
EaeI YGGCCR 1 cut(s) 132
Eam1104I CTCTTC 1 cut(s) 18
EarI CTCTTC 1 cut(s) 18
Eco57I CTGAAG 1 cut(s) 42
FaeI CATG 2 cut(s) 68, 208
FaiI YATR 4 cut(s) 12, 66, 114, 206
FatI CATG 2 cut(s) 64, 204
Fnu4HI GCNGC 1 cut(s) 183
Fsp4HI GCNGC 1 cut(s) 183
FspBI CTAG 1 cut(s) 176
GluI GCNGC 1 cut(s) 183
GsaI CCCAGC 1 cut(s) 189
HaeIII GGCC 2 cut(s) 82, 134
Hin1II CATG 2 cut(s) 68, 208
HinfI GANTC 3 cut(s) 86, 101, 172
HphI GGTGA 1 cut(s) 220
Hpy188III TCNNGA 1 cut(s) 176
HpyCH4V TGCA 3 cut(s) 10, 34, 204
HpyF3I CTNAG 1 cut(s) 150
Hsp92II CATG 2 cut(s) 68, 208
LpnPI CCDG 5 cut(s) 20, 96, 111, 171, 176
Lsp1109I GCAGC 1 cut(s) 169
MaeI CTAG 1 cut(s) 176
MboII GAAGA 2 cut(s) 35, 223
MfeI CAATTG 1 cut(s) 54
MlsI TGGCCA 1 cut(s) 134
MluCI AATT 3 cut(s) 54, 137, 142
MluNI TGGCCA 1 cut(s) 134
MlyI GAGTC 1 cut(s) 166
MnlI CCTC 1 cut(s) 61
Mox20I TGGCCA 1 cut(s) 134
MscI TGGCCA 1 cut(s) 134
Msp20I TGGCCA 1 cut(s) 134
MunI CAATTG 1 cut(s) 54
NlaIII CATG 2 cut(s) 68, 208
PfeI GAWTC 2 cut(s) 86, 101
PkrI GCNGC 1 cut(s) 184
PleI GAGTC 1 cut(s) 166
PpsI GAGTC 1 cut(s) 166
PspFI CCCAGC 1 cut(s) 185
SatI GCNGC 1 cut(s) 183
SchI GAGTC 1 cut(s) 166
SetI ASST 2 cut(s) 156, 184
SgeI CNNG 9 cut(s) 19, 77, 95, 110, 169, 188, 198, 203, 217
SmlI CTYRAG 1 cut(s) 155
SmoI CTYRAG 1 cut(s) 155
Sse9I AATT 3 cut(s) 54, 137, 142
SspMI CTAG 1 cut(s) 176
TasI AATT 3 cut(s) 54, 137, 142
TfiI GAWTC 2 cut(s) 86, 101
TseI GCWGC 1 cut(s) 182
TspDTI ATGAA 1 cut(s) 81
XapI RAATTY 1 cut(s) 137
XbaI TCTAGA 1 cut(s) 175
XspI CTAG 1 cut(s) 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.