RchiOBHm_Chr6g0257751

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
13103798 .. 13104017
220 bp
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UTR
Exon/CDS
Intron
PRQ23116

Sequence Viewer

Length: 201 bp
ATGGGAGGATCTGTTGATGAAGTACACGAGTTCATGAATTGGCTTAATTCTAAGGAACCAAATTCAGTTGTTTATATCTGTTTTGGAAGCCTCACCAATTTCAGTGATTGTCAGCTCATAGAGATTGCCTTGGCTCTTGAGGCTTCTCAGCAGCAATTCATCTGGGTTGTGAAGAAGGAAAAGCATGATAAAGAAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

66

Amino Acids

7.59

Weight (kDa)

4.68

Isoelectric Point (pI)

24.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022642)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 16
AcsI RAATTY 1 cut(s) 61
AfaI GTAC 1 cut(s) 24
AluBI AGCT 1 cut(s) 115
AluI AGCT 1 cut(s) 115
AlwI GGATC 1 cut(s) 16
ApeKI GCWGC 1 cut(s) 151
ApoI RAATTY 1 cut(s) 61
AsuHPI GGTGA 1 cut(s) 85
BauI CACGAG 1 cut(s) 26
BbvI GCAGC 1 cut(s) 163
BisI GCNGC 1 cut(s) 152
BlsI GCNGC 1 cut(s) 153
BmiI GGNNCC 1 cut(s) 57
BpuEI CTTGAG 1 cut(s) 158
BsaJI CCNNGG 1 cut(s) 129
BsaXI ACNNNNNCTCC 1 cut(s) 27
BseDI CCNNGG 1 cut(s) 129
BseMII CTCAG 1 cut(s) 161
BseXI GCAGC 1 cut(s) 163
Bsp143I GATC 1 cut(s) 8
BspCNI CTCAG 1 cut(s) 160
BspHI TCATGA 1 cut(s) 33
BspLI GGNNCC 1 cut(s) 57
BspPI GGATC 1 cut(s) 16
BssECI CCNNGG 1 cut(s) 129
BssMI GATC 1 cut(s) 8
BssSI CACGAG 1 cut(s) 26
BssT1I CCWWGG 1 cut(s) 129
Bst2BI CACGAG 1 cut(s) 26
Bst6I CTCTTC 1 cut(s) 189
BstDEI CTNAG 2 cut(s) 51, 147
BstKTI GATC 1 cut(s) 11
BstMBI GATC 1 cut(s) 8
BstMWI GCNNNNNNNGC 1 cut(s) 140
BstV1I GCAGC 1 cut(s) 163
BstX2I RGATCY 1 cut(s) 8
BstYI RGATCY 1 cut(s) 8
BtsIMutI CAGTG 1 cut(s) 109
CciI TCATGA 1 cut(s) 33
Csp6I GTAC 1 cut(s) 23
CviAII CATG 2 cut(s) 34, 185
CviJI RGCY 5 cut(s) 43, 90, 115, 134, 143
CviKI_1 RGCY 5 cut(s) 43, 90, 115, 134, 143
CviQI GTAC 1 cut(s) 23
DdeI CTNAG 2 cut(s) 51, 147
DpnI GATC 1 cut(s) 10
DpnII GATC 1 cut(s) 8
Eam1104I CTCTTC 1 cut(s) 189
EarI CTCTTC 1 cut(s) 189
Eco130I CCWWGG 1 cut(s) 129
EcoT14I CCWWGG 1 cut(s) 129
ErhI CCWWGG 1 cut(s) 129
FaeI CATG 2 cut(s) 37, 188
FaiI YATR 4 cut(s) 35, 75, 119, 186
FatI CATG 2 cut(s) 33, 184
Fnu4HI GCNGC 1 cut(s) 152
Fsp4HI GCNGC 1 cut(s) 152
GluI GCNGC 1 cut(s) 152
Hin1II CATG 2 cut(s) 37, 188
HphI GGTGA 1 cut(s) 85
Hpy166II GTNNAC 1 cut(s) 25
Hpy188III TCNNGA 2 cut(s) 34, 137
Hpy8I GTNNAC 1 cut(s) 25
HpyAV CCTTC 1 cut(s) 169
HpyF10VI GCNNNNNNNGC 1 cut(s) 140
HpyF3I CTNAG 2 cut(s) 51, 147
Hsp92II CATG 2 cut(s) 37, 188
Kzo9I GATC 1 cut(s) 8
LpnPI CCDG 1 cut(s) 148
Lsp1109I GCAGC 1 cut(s) 163
MalI GATC 1 cut(s) 10
MboI GATC 1 cut(s) 8
MboII GAAGA 1 cut(s) 184
MflI RGATCY 1 cut(s) 8
MluCI AATT 5 cut(s) 37, 46, 61, 97, 155
MnlI CCTC 2 cut(s) 101, 133
MseI TTAA 1 cut(s) 45
MwoI GCNNNNNNNGC 1 cut(s) 140
NdeII GATC 1 cut(s) 8
NlaIII CATG 2 cut(s) 37, 188
NlaIV GGNNCC 1 cut(s) 57
PagI TCATGA 1 cut(s) 33
PkrI GCNGC 1 cut(s) 153
PspN4I GGNNCC 1 cut(s) 57
PsuI RGATCY 1 cut(s) 8
RsaI GTAC 1 cut(s) 24
RsaNI GTAC 1 cut(s) 23
SaqAI TTAA 1 cut(s) 45
SatI GCNGC 1 cut(s) 152
Sau3AI GATC 1 cut(s) 8
SetI ASST 1 cut(s) 117
SgeI CNNG 7 cut(s) 38, 40, 46, 142, 149, 175, 197
SmlI CTYRAG 1 cut(s) 137
SmoI CTYRAG 1 cut(s) 137
Sse9I AATT 5 cut(s) 37, 46, 61, 97, 155
StyI CCWWGG 1 cut(s) 129
TasI AATT 5 cut(s) 37, 46, 61, 97, 155
TatI WGTACW 1 cut(s) 22
Tru1I TTAA 1 cut(s) 45
Tru9I TTAA 1 cut(s) 45
TscAI CASTG 1 cut(s) 109
TseI GCWGC 1 cut(s) 151
TspDTI ATGAA 4 cut(s) 22, 33, 50, 148
TspRI CASTG 1 cut(s) 109
XapI RAATTY 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.