RchiOBHm_Chr2g0110951

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
22627425 .. 22628580
1156 bp
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UTR
Exon/CDS
Intron
PRQ48456

Sequence Viewer

Length: 543 bp
ATGAGTTCTTTGGGAGGCATGCTAATCAGTCCTTCAAGTTTTCTGTTTCTCTTCTCCCTTGTAGTTCTGATCTTCAACATCTTTCGCAAAATATGGTGGATTCCTACTCGCGTACAGAAATTTATGGCTTCACAGGGAATCAAAGGTCCTCCTTATAGACTCATCCATGGAAACACCAAAGAAATCGCCAACATGTACAAGGAAGCCATGAACAAGCCGTTATATTTGTCACACGACATATTACCTGTAAATATGATTCCACACATGATAGCTGGTGCTGAGACAATGCTAAGAAGATGGAAAAACCATGAAGGCCAAGAGATTGAGATGTATCAAGAATTTAGATTGTTGACTTCAGAAGTGATTTCCAGGACAGCTTTTGGTAGCAGCTATTTGGAAGGAAAGCACATATTTGAAATGTTGATGAAGTTATGCTCCTTGCTTGTCAACTATGAACTCAAACTCAAGCTTCCAGGCATTAGGTTAACAGCTTTACATTCTAACACACTGTACAATAGCCTTGTTATGCGCGCAGCAGCTTGA

Protein Analysis

180

Amino Acids

20.73

Weight (kDa)

9.71

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022561)

Species Orthologous Gene IDs
pyrus_communis pycom13g05090
rosa_chinensis RchiOBHm_Chr2g0110951 RchiOBHm_Chr4g0420591
rosa_multiflora Rmu_sc0002137.1_g000018

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 111, 531
AcsI RAATTY 2 cut(s) 119, 338
AcuI CTGAAG 1 cut(s) 339
AfaI GTAC 3 cut(s) 114, 197, 512
AflIII ACRYGT 1 cut(s) 192
AgsI TTSAA 3 cut(s) 36, 76, 416
AjnI CCWGG 2 cut(s) 368, 472
AluBI AGCT 6 cut(s) 272, 377, 390, 469, 491, 539
AluI AGCT 6 cut(s) 272, 377, 390, 469, 491, 539
Alw26I GTCTC 1 cut(s) 275
AoxI GGCC 1 cut(s) 313
ApeKI GCWGC 3 cut(s) 387, 533, 536
ApoI RAATTY 2 cut(s) 119, 338
AspLEI GCGC 2 cut(s) 531, 533
AspS9I GGNCC 1 cut(s) 146
AvaII GGWCC 1 cut(s) 146
BbvI GCAGC 1 cut(s) 399
BccI CCATC 1 cut(s) 291
BceAI ACGGC 1 cut(s) 202
BciT130I CCWGG 2 cut(s) 370, 474
BcoDI GTCTC 1 cut(s) 275
BisI GCNGC 3 cut(s) 388, 534, 537
BlsI GCNGC 3 cut(s) 389, 535, 538
Bme1390I CCNGG 2 cut(s) 370, 474
Bme18I GGWCC 1 cut(s) 146
BmgT120I GGNCC 1 cut(s) 146
BmrFI CCNGG 2 cut(s) 370, 474
BpuEI CTTGAG 1 cut(s) 449
BsaJI CCNNGG 1 cut(s) 166
BseBI CCWGG 2 cut(s) 370, 474
BseDI CCNNGG 1 cut(s) 166
BseGI GGATG 1 cut(s) 162
BseMII CTCAG 1 cut(s) 270
BsePI GCGCGC 1 cut(s) 529
BseXI GCAGC 1 cut(s) 399
Bsh1236I CGCG 2 cut(s) 111, 531
BshFI GGCC 1 cut(s) 315
BsmAI GTCTC 1 cut(s) 275
BsnI GGCC 1 cut(s) 315
Bsp1407I TGTACA 2 cut(s) 195, 510
Bsp143I GATC 1 cut(s) 69
Bsp19I CCATGG 1 cut(s) 166
BspANI GGCC 1 cut(s) 315
BspCNI CTCAG 1 cut(s) 271
BspFNI CGCG 2 cut(s) 111, 531
BsrGI TGTACA 2 cut(s) 195, 510
BssECI CCNNGG 1 cut(s) 166
BssHII GCGCGC 1 cut(s) 529
BssMI GATC 1 cut(s) 69
BssT1I CCWWGG 1 cut(s) 166
Bst2UI CCWGG 2 cut(s) 370, 474
Bst4CI ACNGT 1 cut(s) 510
Bst6I CTCTTC 1 cut(s) 56
BstAUI TGTACA 2 cut(s) 195, 510
BstC8I GCNNGC 2 cut(s) 20, 531
BstDEI CTNAG 2 cut(s) 279, 290
BstDSI CCRYGG 1 cut(s) 166
BstF5I GGATG 1 cut(s) 162
BstFNI CGCG 2 cut(s) 111, 531
BstHHI GCGC 2 cut(s) 531, 533
BstKTI GATC 1 cut(s) 72
BstMAI GTCTC 1 cut(s) 275
BstMBI GATC 1 cut(s) 69
BstNI CCWGG 2 cut(s) 370, 474
BstNSI RCATGY 2 cut(s) 22, 196
BstSCI CCNGG 2 cut(s) 368, 472
BstUI CGCG 2 cut(s) 111, 531
BstV1I GCAGC 1 cut(s) 399
BsuRI GGCC 1 cut(s) 315
BtgI CCRYGG 1 cut(s) 166
BtsCI GGATG 1 cut(s) 162
BtsIMutI CAGTG 1 cut(s) 506
Cac8I GCNNGC 2 cut(s) 20, 531
CfoI GCGC 2 cut(s) 531, 533
Cfr13I GGNCC 1 cut(s) 146
Csp6I GTAC 3 cut(s) 113, 196, 511
CviAII CATG 6 cut(s) 19, 167, 193, 208, 265, 308
CviQI GTAC 3 cut(s) 113, 196, 511
DdeI CTNAG 2 cut(s) 279, 290
DpnI GATC 1 cut(s) 71
DpnII GATC 1 cut(s) 69
Eam1104I CTCTTC 1 cut(s) 56
EarI CTCTTC 1 cut(s) 56
Eco130I CCWWGG 1 cut(s) 166
Eco47I GGWCC 1 cut(s) 146
Eco57I CTGAAG 1 cut(s) 339
EcoO109I RGGNCCY 1 cut(s) 146
EcoRII CCWGG 2 cut(s) 368, 472
EcoT14I CCWWGG 1 cut(s) 166
ErhI CCWWGG 1 cut(s) 166
FaeI CATG 6 cut(s) 22, 170, 196, 211, 268, 311
FatI CATG 6 cut(s) 18, 166, 192, 207, 264, 307
Fnu4HI GCNGC 3 cut(s) 388, 534, 537
FokI GGATG 1 cut(s) 149
Fsp4HI GCNGC 3 cut(s) 388, 534, 537
GlaI GCGC 2 cut(s) 530, 532
GluI GCNGC 3 cut(s) 388, 534, 537
HaeIII GGCC 1 cut(s) 315
HhaI GCGC 2 cut(s) 531, 533
Hin1II CATG 6 cut(s) 22, 170, 196, 211, 268, 311
Hin6I GCGC 2 cut(s) 529, 531
HinP1I GCGC 2 cut(s) 529, 531
HincII GTYRAC 3 cut(s) 351, 448, 486
HindII GTYRAC 3 cut(s) 351, 448, 486
HindIII AAGCTT 1 cut(s) 467
HinfI GANTC 4 cut(s) 100, 138, 159, 256
HpaI GTTAAC 1 cut(s) 486
Hpy166II GTNNAC 3 cut(s) 351, 448, 486
Hpy188I TCNGA 2 cut(s) 69, 358
Hpy188III TCNNGA 1 cut(s) 335
Hpy8I GTNNAC 3 cut(s) 351, 448, 486
HpyAV CCTTC 3 cut(s) 42, 305, 392
HpyCH4III ACNGT 1 cut(s) 510
HpyF3I CTNAG 2 cut(s) 279, 290
Hsp92II CATG 6 cut(s) 22, 170, 196, 211, 268, 311
HspAI GCGC 2 cut(s) 529, 531
KspAI GTTAAC 1 cut(s) 486
Kzo9I GATC 1 cut(s) 69
LmnI GCTCC 1 cut(s) 440
LpnPI CCDG 7 cut(s) 119, 258, 258, 355, 382, 459, 486
Lsp1109I GCAGC 1 cut(s) 399
MaeIII GTNAC 1 cut(s) 228
MalI GATC 1 cut(s) 71
MboI GATC 1 cut(s) 69
MboII GAAGA 3 cut(s) 43, 64, 306
MluCI AATT 2 cut(s) 119, 338
MlyI GAGTC 1 cut(s) 153
MnlI CCTC 2 cut(s) 8, 159
MseI TTAA 1 cut(s) 485
MspR9I CCNGG 2 cut(s) 370, 474
MvaI CCWGG 2 cut(s) 370, 474
MvnI CGCG 2 cut(s) 111, 531
NcoI CCATGG 1 cut(s) 166
NdeII GATC 1 cut(s) 69
NlaIII CATG 6 cut(s) 22, 170, 196, 211, 268, 311
NmuCI GTSAC 1 cut(s) 228
NspI RCATGY 2 cut(s) 22, 196
PaeI GCATGC 1 cut(s) 22
PauI GCGCGC 1 cut(s) 529
PciI ACATGT 1 cut(s) 192
PfeI GAWTC 3 cut(s) 100, 138, 256
PfoI TCCNGGA 1 cut(s) 368
PkrI GCNGC 3 cut(s) 389, 535, 538
PleI GAGTC 1 cut(s) 153
PpsI GAGTC 1 cut(s) 153
PpuMI RGGWCCY 1 cut(s) 146
PscI ACATGT 1 cut(s) 192
Psp5II RGGWCCY 1 cut(s) 146
Psp6I CCWGG 2 cut(s) 368, 472
PspGI CCWGG 2 cut(s) 368, 472
PspPI GGNCC 1 cut(s) 146
PspPPI RGGWCCY 1 cut(s) 146
PteI GCGCGC 1 cut(s) 529
RsaI GTAC 3 cut(s) 114, 197, 512
RsaNI GTAC 3 cut(s) 113, 196, 511
SaqAI TTAA 1 cut(s) 485
SatI GCNGC 3 cut(s) 388, 534, 537
Sau3AI GATC 1 cut(s) 69
Sau96I GGNCC 1 cut(s) 146
SchI GAGTC 1 cut(s) 153
ScrFI CCNGG 2 cut(s) 370, 474
SetI ASST 9 cut(s) 148, 247, 274, 379, 392, 471, 485, 493, 541
SinI GGWCC 1 cut(s) 146
SmlI CTYRAG 1 cut(s) 464
SmoI CTYRAG 1 cut(s) 464
SphI GCATGC 1 cut(s) 22
Sse9I AATT 2 cut(s) 119, 338
StyD4I CCNGG 2 cut(s) 368, 472
StyI CCWWGG 1 cut(s) 166
TaaI ACNGT 1 cut(s) 510
TasI AATT 2 cut(s) 119, 338
TatI WGTACW 2 cut(s) 195, 510
TfiI GAWTC 3 cut(s) 100, 138, 256
Tru1I TTAA 1 cut(s) 485
Tru9I TTAA 1 cut(s) 485
TscAI CASTG 1 cut(s) 513
TseFI GTSAC 1 cut(s) 228
TseI GCWGC 3 cut(s) 387, 533, 536
Tsp45I GTSAC 1 cut(s) 228
TspDTI ATGAA 4 cut(s) 224, 324, 440, 468
TspRI CASTG 1 cut(s) 513
VpaK11BI GGWCC 1 cut(s) 146
XapI RAATTY 2 cut(s) 119, 338
XceI RCATGY 2 cut(s) 22, 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.