RchiOBHm_Chr2g0113811

acyltransferase-like 4

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
25919979 .. 25921851
1873 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48712

Sequence Viewer

Length: 240 bp
ATGGAGAAGCACAAAGAGAAAGGACTCGAAGTAACATCTCTTAAAGAGGAGTGGGAAATCATAGCAGACGATCAAGACGATAATTACAAGAATATAACTGGTGATGGAAACCCTATGGTGAGCTCCATATCTTTTTCTCAAGAGGGAGCAGAGGCTCGTGCAACTGTCACTGTTTACCCTGAGAATGAGGGCAAACAACATGTGGAGCTCAATGCTCTAAGTGTGTCGGTTGATGCCTGA

Protein Analysis

79

Amino Acids

8.72

Weight (kDa)

4.37

Isoelectric Point (pI)

25.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0024805)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0113811
rosa_samantha Rh4CG123500 Rh5AG345700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AflIII ACRYGT 1 cut(s) 199
AluBI AGCT 2 cut(s) 123, 208
AluI AGCT 2 cut(s) 123, 208
Alw21I GWGCWC 2 cut(s) 125, 210
AsuHPI GGTGA 2 cut(s) 113, 130
BanII GRGCYC 2 cut(s) 125, 210
BauI CACGAG 1 cut(s) 156
Bbv12I GWGCWC 2 cut(s) 125, 210
BccI CCATC 1 cut(s) 98
BmsI GCATC 1 cut(s) 223
BpuEI CTTGAG 1 cut(s) 123
Bse1I ACTGG 1 cut(s) 103
BseMII CTCAG 1 cut(s) 171
BseNI ACTGG 1 cut(s) 103
BseRI GAGGAG 1 cut(s) 62
BsiHKAI GWGCWC 2 cut(s) 125, 210
Bsp1286I GDGCHC 2 cut(s) 125, 210
Bsp143I GATC 1 cut(s) 70
BspCNI CTCAG 1 cut(s) 172
BsrI ACTGG 1 cut(s) 103
BssMI GATC 1 cut(s) 70
BssSI CACGAG 1 cut(s) 156
Bst2BI CACGAG 1 cut(s) 156
Bst4CI ACNGT 2 cut(s) 166, 172
BstDEI CTNAG 2 cut(s) 180, 218
BstKTI GATC 1 cut(s) 73
BstMBI GATC 1 cut(s) 70
BstNSI RCATGY 1 cut(s) 203
BtsIMutI CAGTG 1 cut(s) 168
CviAII CATG 1 cut(s) 200
CviJI RGCY 3 cut(s) 123, 155, 208
CviKI_1 RGCY 3 cut(s) 123, 155, 208
DdeI CTNAG 2 cut(s) 180, 218
DpnI GATC 1 cut(s) 72
DpnII GATC 1 cut(s) 70
Ecl136II GAGCTC 2 cut(s) 123, 208
Eco24I GRGCYC 2 cut(s) 125, 210
Eco53kI GAGCTC 2 cut(s) 123, 208
EcoICRI GAGCTC 2 cut(s) 123, 208
EcoT38I GRGCYC 2 cut(s) 125, 210
FaeI CATG 1 cut(s) 203
FaiI YATR 5 cut(s) 62, 95, 116, 128, 201
FatI CATG 1 cut(s) 199
FriOI GRGCYC 2 cut(s) 125, 210
Hin1II CATG 1 cut(s) 203
HinfI GANTC 1 cut(s) 24
HphI GGTGA 2 cut(s) 113, 130
Hpy166II GTNNAC 1 cut(s) 175
Hpy188III TCNNGA 2 cut(s) 74, 140
Hpy8I GTNNAC 1 cut(s) 175
HpyCH4III ACNGT 2 cut(s) 166, 172
HpyCH4V TGCA 1 cut(s) 161
HpyF3I CTNAG 2 cut(s) 180, 218
Hsp92II CATG 1 cut(s) 203
Kzo9I GATC 1 cut(s) 70
LmnI GCTCC 3 cut(s) 128, 146, 205
LpnPI CCDG 2 cut(s) 84, 192
LweI GCATC 1 cut(s) 223
MaeIII GTNAC 2 cut(s) 31, 166
MalI GATC 1 cut(s) 72
MboI GATC 1 cut(s) 70
MhlI GDGCHC 2 cut(s) 125, 210
MluCI AATT 1 cut(s) 82
MlyI GAGTC 1 cut(s) 18
MnlI CCTC 4 cut(s) 40, 136, 145, 181
MseI TTAA 1 cut(s) 42
NdeII GATC 1 cut(s) 70
NlaIII CATG 1 cut(s) 203
NmuCI GTSAC 1 cut(s) 166
NspI RCATGY 1 cut(s) 203
PciI ACATGT 1 cut(s) 199
PcsI WCGNNNNNNNCGW 1 cut(s) 75
PleI GAGTC 1 cut(s) 18
PpsI GAGTC 1 cut(s) 18
PscI ACATGT 1 cut(s) 199
Psp124BI GAGCTC 2 cut(s) 125, 210
SacI GAGCTC 2 cut(s) 125, 210
SaqAI TTAA 1 cut(s) 42
Sau3AI GATC 1 cut(s) 70
SchI GAGTC 1 cut(s) 18
SduI GDGCHC 2 cut(s) 125, 210
SetI ASST 2 cut(s) 125, 210
SfaNI GCATC 1 cut(s) 223
SgeI CNNG 9 cut(s) 38, 86, 100, 111, 152, 168, 170, 191, 212
SmlI CTYRAG 1 cut(s) 138
SmoI CTYRAG 1 cut(s) 138
Sse9I AATT 1 cut(s) 82
SstI GAGCTC 2 cut(s) 125, 210
TaaI ACNGT 2 cut(s) 166, 172
TaqI TCGA 1 cut(s) 27
TasI AATT 1 cut(s) 82
Tru1I TTAA 1 cut(s) 42
Tru9I TTAA 1 cut(s) 42
TscAI CASTG 1 cut(s) 175
TseFI GTSAC 1 cut(s) 166
Tsp45I GTSAC 1 cut(s) 166
TspRI CASTG 1 cut(s) 175
XceI RCATGY 1 cut(s) 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.