RchiOBHm_Chr2g0114111

Glutamine amidotransferase domain

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
26163207 .. 26163878
672 bp
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UTR
Exon/CDS
Intron
PRQ48740

Sequence Viewer

Length: 264 bp
ATGAGAAATTTTTTCCAAAGTTATGGACAGAATGCTGCAAGATCGACAGTTTTCGGTGGTCCAAGTGTGGCATGCAGCACAGTAAAAGCTGTGGAGTGGGATGCGGAATGGTCCAAGAACCCTGATCCATCTGGTCGTGCTGCACTTGGTATACATGCAGCTGCATATGAGGAATCCAAAGAAGTGAAGACTGGAAGTCCTGTGAGCGACTCTCCACAGAAACTTGTAAAAGGGTTTGCGGAGAAAGTGGCTGCAGTAGTTTGA

Protein Analysis

87

Amino Acids

9.2

Weight (kDa)

7.87

Isoelectric Point (pI)

41.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024876)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0114111
rosa_multiflora Rmu_sc0004283.1_g000029 Rmu_sc0025329.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 151
AciI CCGC 2 cut(s) 104, 239
AclWI GGATC 1 cut(s) 119
AcsI RAATTY 1 cut(s) 7
AhdI GACNNNNNGTC 1 cut(s) 195
AluBI AGCT 2 cut(s) 89, 161
AluI AGCT 2 cut(s) 89, 161
AlwI GGATC 1 cut(s) 119
ApeKI GCWGC 6 cut(s) 35, 75, 140, 158, 161, 251
ApoI RAATTY 1 cut(s) 7
AspS9I GGNCC 2 cut(s) 59, 111
AvaII GGWCC 2 cut(s) 59, 111
BbsI GAAGAC 1 cut(s) 194
BbvI GCAGC 6 cut(s) 22, 87, 127, 148, 170, 238
BccI CCATC 1 cut(s) 136
BfmI CTRYAG 1 cut(s) 252
BisI GCNGC 6 cut(s) 36, 76, 141, 159, 162, 252
BlsI GCNGC 6 cut(s) 37, 77, 142, 160, 163, 253
Bme18I GGWCC 2 cut(s) 59, 111
BmeRI GACNNNNNGTC 1 cut(s) 195
BmgT120I GGNCC 2 cut(s) 59, 111
BmsI GCATC 1 cut(s) 91
BpiI GAAGAC 1 cut(s) 194
BplI GAGNNNNNCTC 2 cut(s) 196, 228
Bse1I ACTGG 1 cut(s) 196
BseGI GGATG 1 cut(s) 106
BseNI ACTGG 1 cut(s) 196
BseXI GCAGC 6 cut(s) 22, 87, 127, 148, 170, 238
BsgI GTGCAG 1 cut(s) 126
BsmI GAATGC 1 cut(s) 37
Bsp143I GATC 2 cut(s) 41, 124
BspACI CCGC 2 cut(s) 104, 239
BspMAI CTGCAG 1 cut(s) 256
BspPI GGATC 1 cut(s) 119
BsrI ACTGG 1 cut(s) 196
BssMI GATC 2 cut(s) 41, 124
BssNAI GTATAC 1 cut(s) 152
Bst1107I GTATAC 1 cut(s) 152
Bst4CI ACNGT 2 cut(s) 49, 82
BstC8I GCNNGC 1 cut(s) 73
BstF5I GGATG 1 cut(s) 106
BstKTI GATC 2 cut(s) 44, 127
BstMBI GATC 2 cut(s) 41, 124
BstNSI RCATGY 2 cut(s) 75, 158
BstSFI CTRYAG 1 cut(s) 252
BstV1I GCAGC 6 cut(s) 22, 87, 127, 148, 170, 238
BstV2I GAAGAC 1 cut(s) 194
BstXI CCANNNNNNTGG 1 cut(s) 23
BstZ17I GTATAC 1 cut(s) 152
BtsCI GGATG 1 cut(s) 106
Cac8I GCNNGC 1 cut(s) 73
Cfr13I GGNCC 2 cut(s) 59, 111
CviAII CATG 2 cut(s) 72, 155
CviJI RGCY 3 cut(s) 89, 161, 251
CviKI_1 RGCY 3 cut(s) 89, 161, 251
DpnI GATC 2 cut(s) 43, 126
DpnII GATC 2 cut(s) 41, 124
DriI GACNNNNNGTC 1 cut(s) 195
Eam1105I GACNNNNNGTC 1 cut(s) 195
Eco47I GGWCC 2 cut(s) 59, 111
FaeI CATG 2 cut(s) 75, 158
FaiI YATR 6 cut(s) 24, 73, 152, 156, 166, 168
FatI CATG 2 cut(s) 71, 154
FauNDI CATATG 1 cut(s) 166
FblI GTMKAC 1 cut(s) 151
Fnu4HI GCNGC 6 cut(s) 36, 76, 141, 159, 162, 252
FokI GGATG 1 cut(s) 113
Fsp4HI GCNGC 6 cut(s) 36, 76, 141, 159, 162, 252
GluI GCNGC 6 cut(s) 36, 76, 141, 159, 162, 252
Hin1II CATG 2 cut(s) 75, 158
HinfI GANTC 2 cut(s) 173, 209
Hpy166II GTNNAC 1 cut(s) 152
Hpy8I GTNNAC 1 cut(s) 152
HpyCH4III ACNGT 2 cut(s) 49, 82
HpyCH4V TGCA 6 cut(s) 38, 75, 143, 158, 164, 254
Hsp92II CATG 2 cut(s) 75, 158
Kzo9I GATC 2 cut(s) 41, 124
LpnPI CCDG 4 cut(s) 117, 135, 177, 213
Lsp1109I GCAGC 6 cut(s) 22, 87, 127, 148, 170, 238
LweI GCATC 1 cut(s) 91
MalI GATC 2 cut(s) 43, 126
MboI GATC 2 cut(s) 41, 124
MboII GAAGA 1 cut(s) 199
MluCI AATT 1 cut(s) 7
MlyI GAGTC 1 cut(s) 203
MnlI CCTC 1 cut(s) 163
MspA1I CMGCKG 1 cut(s) 161
Mva1269I GAATGC 1 cut(s) 37
NdeI CATATG 1 cut(s) 166
NdeII GATC 2 cut(s) 41, 124
NlaIII CATG 2 cut(s) 75, 158
NspI RCATGY 2 cut(s) 75, 158
PaeI GCATGC 1 cut(s) 75
PctI GAATGC 1 cut(s) 37
PfeI GAWTC 1 cut(s) 173
PkrI GCNGC 6 cut(s) 37, 77, 142, 160, 163, 253
PleI GAGTC 1 cut(s) 203
PpsI GAGTC 1 cut(s) 203
PspPI GGNCC 2 cut(s) 59, 111
PstI CTGCAG 1 cut(s) 256
PvuII CAGCTG 1 cut(s) 161
SatI GCNGC 6 cut(s) 36, 76, 141, 159, 162, 252
Sau3AI GATC 2 cut(s) 41, 124
Sau96I GGNCC 2 cut(s) 59, 111
SchI GAGTC 1 cut(s) 203
SetI ASST 2 cut(s) 91, 163
SfaNI GCATC 1 cut(s) 91
SfcI CTRYAG 1 cut(s) 252
SinI GGWCC 2 cut(s) 59, 111
SphI GCATGC 1 cut(s) 75
Sse9I AATT 1 cut(s) 7
SsiI CCGC 2 cut(s) 104, 239
TaaI ACNGT 2 cut(s) 49, 82
TaqI TCGA 1 cut(s) 44
TasI AATT 1 cut(s) 7
TfiI GAWTC 1 cut(s) 173
TseI GCWGC 6 cut(s) 35, 75, 140, 158, 161, 251
VpaK11BI GGWCC 2 cut(s) 59, 111
XapI RAATTY 1 cut(s) 7
XceI RCATGY 2 cut(s) 75, 158
XmiI GTMKAC 1 cut(s) 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.