26S proteasome non-ATPase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0118231 |
| rosa_multiflora | Rmu_sc0000373.1_g000027 Rmu_sc0001925.1_g000006 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 42 |
| Acc36I | ACCTGC | 1 cut(s) | 42 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 345 |
| AclI | AACGTT | 1 cut(s) | 633 |
| AclWI | GGATC | 4 cut(s) | 136, 155, 168, 218 |
| AcoI | YGGCCR | 1 cut(s) | 573 |
| AcsI | RAATTY | 1 cut(s) | 286 |
| AcuI | CTGAAG | 1 cut(s) | 438 |
| AfaI | GTAC | 1 cut(s) | 203 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 345 |
| AgsI | TTSAA | 8 cut(s) | 19, 30, 61, 304, 358, 443, 465, 490 |
| AjnI | CCWGG | 2 cut(s) | 255, 522 |
| AluBI | AGCT | 7 cut(s) | 167, 416, 505, 530, 667, 690, 731 |
| AluI | AGCT | 7 cut(s) | 167, 416, 505, 530, 667, 690, 731 |
| Alw26I | GTCTC | 1 cut(s) | 487 |
| AlwI | GGATC | 4 cut(s) | 136, 155, 168, 218 |
| Ama87I | CYCGRG | 1 cut(s) | 475 |
| AoxI | GGCC | 2 cut(s) | 573, 587 |
| ApeKI | GCWGC | 5 cut(s) | 413, 505, 667, 690, 728 |
| ApoI | RAATTY | 1 cut(s) | 286 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 353 |
| AspLEI | GCGC | 1 cut(s) | 568 |
| AspS9I | GGNCC | 1 cut(s) | 336 |
| AsuHPI | GGTGA | 2 cut(s) | 207, 416 |
| AvaI | CYCGRG | 1 cut(s) | 475 |
| AvaII | GGWCC | 1 cut(s) | 336 |
| BalI | TGGCCA | 1 cut(s) | 575 |
| BamHI | GGATCC | 1 cut(s) | 160 |
| BbvI | GCAGC | 5 cut(s) | 425, 492, 654, 677, 740 |
| BceAI | ACGGC | 1 cut(s) | 102 |
| BciT130I | CCWGG | 2 cut(s) | 257, 524 |
| BciVI | GTATCC | 2 cut(s) | 168, 530 |
| BcoDI | GTCTC | 1 cut(s) | 487 |
| BfaI | CTAG | 1 cut(s) | 455 |
| BfoI | RGCGCY | 1 cut(s) | 569 |
| BfuAI | ACCTGC | 1 cut(s) | 42 |
| BfuI | GTATCC | 2 cut(s) | 168, 530 |
| BglII | AGATCT | 1 cut(s) | 421 |
| BisI | GCNGC | 5 cut(s) | 414, 506, 668, 691, 729 |
| BlsI | GCNGC | 5 cut(s) | 415, 507, 669, 692, 730 |
| Bme1390I | CCNGG | 2 cut(s) | 257, 524 |
| Bme18I | GGWCC | 1 cut(s) | 336 |
| BmeT110I | CYCGRG | 1 cut(s) | 475 |
| BmgT120I | GGNCC | 1 cut(s) | 336 |
| BmiI | GGNNCC | 1 cut(s) | 162 |
| BmrFI | CCNGG | 2 cut(s) | 257, 524 |
| BmsI | GCATC | 1 cut(s) | 547 |
| BpmI | CTGGAG | 1 cut(s) | 278 |
| BpuEI | CTTGAG | 1 cut(s) | 128 |
| BsaBI | GATNNNNATC | 1 cut(s) | 267 |
| BsaJI | CCNNGG | 3 cut(s) | 255, 318, 561 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 345 |
| Bse1I | ACTGG | 1 cut(s) | 24 |
| Bse8I | GATNNNNATC | 1 cut(s) | 267 |
| BseBI | CCWGG | 2 cut(s) | 257, 524 |
| BseDI | CCNNGG | 3 cut(s) | 255, 318, 561 |
| BseJI | GATNNNNATC | 1 cut(s) | 267 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 345 |
| BseMII | CTCAG | 2 cut(s) | 182, 522 |
| BseNI | ACTGG | 1 cut(s) | 24 |
| BseXI | GCAGC | 5 cut(s) | 425, 492, 654, 677, 740 |
| BshFI | GGCC | 2 cut(s) | 575, 589 |
| BsiHKCI | CYCGRG | 1 cut(s) | 475 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 345 |
| BsmAI | GTCTC | 1 cut(s) | 487 |
| BsnI | GGCC | 2 cut(s) | 575, 589 |
| BsoBI | CYCGRG | 1 cut(s) | 475 |
| Bsp143I | GATC | 5 cut(s) | 141, 160, 223, 421, 673 |
| Bsp19I | CCATGG | 1 cut(s) | 318 |
| BspANI | GGCC | 2 cut(s) | 575, 589 |
| BspCNI | CTCAG | 2 cut(s) | 181, 523 |
| BspLI | GGNNCC | 1 cut(s) | 162 |
| BspMI | ACCTGC | 1 cut(s) | 42 |
| BspPI | GGATC | 4 cut(s) | 136, 155, 168, 218 |
| BspQI | GCTCTTC | 1 cut(s) | 680 |
| BsrI | ACTGG | 1 cut(s) | 24 |
| BssECI | CCNNGG | 3 cut(s) | 255, 318, 561 |
| BssMI | GATC | 5 cut(s) | 141, 160, 223, 421, 673 |
| BssT1I | CCWWGG | 2 cut(s) | 318, 561 |
| Bst2UI | CCWGG | 2 cut(s) | 257, 524 |
| Bst6I | CTCTTC | 2 cut(s) | 485, 680 |
| BstDEI | CTNAG | 3 cut(s) | 168, 515, 531 |
| BstDSI | CCRYGG | 1 cut(s) | 318 |
| BstEII | GGTNACC | 1 cut(s) | 313 |
| BstH2I | RGCGCY | 1 cut(s) | 569 |
| BstHHI | GCGC | 1 cut(s) | 568 |
| BstKTI | GATC | 5 cut(s) | 144, 163, 226, 424, 676 |
| BstMAI | GTCTC | 1 cut(s) | 487 |
| BstMBI | GATC | 5 cut(s) | 141, 160, 223, 421, 673 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 572 |
| BstNI | CCWGG | 2 cut(s) | 257, 524 |
| BstNSI | RCATGY | 1 cut(s) | 388 |
| BstPI | GGTNACC | 1 cut(s) | 313 |
| BstSCI | CCNGG | 2 cut(s) | 255, 522 |
| BstV1I | GCAGC | 5 cut(s) | 425, 492, 654, 677, 740 |
| BstX2I | RGATCY | 3 cut(s) | 141, 160, 421 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 171, 568 |
| BstYI | RGATCY | 3 cut(s) | 141, 160, 421 |
| BsuI | GTATCC | 2 cut(s) | 168, 530 |
| BsuRI | GGCC | 2 cut(s) | 575, 589 |
| BtgI | CCRYGG | 1 cut(s) | 318 |
| BtsIMutI | CAGTG | 1 cut(s) | 176 |
| BveI | ACCTGC | 1 cut(s) | 42 |
| CfoI | GCGC | 1 cut(s) | 568 |
| Cfr13I | GGNCC | 1 cut(s) | 336 |
| Csp6I | GTAC | 1 cut(s) | 202 |
| CviAII | CATG | 2 cut(s) | 319, 385 |
| CviQI | GTAC | 1 cut(s) | 202 |
| DdeI | CTNAG | 3 cut(s) | 168, 515, 531 |
| DpnI | GATC | 5 cut(s) | 143, 162, 225, 423, 675 |
| DpnII | GATC | 5 cut(s) | 141, 160, 223, 421, 673 |
| EaeI | YGGCCR | 1 cut(s) | 573 |
| Eam1104I | CTCTTC | 2 cut(s) | 485, 680 |
| EarI | CTCTTC | 2 cut(s) | 485, 680 |
| Eco130I | CCWWGG | 2 cut(s) | 318, 561 |
| Eco47I | GGWCC | 1 cut(s) | 336 |
| Eco57I | CTGAAG | 1 cut(s) | 438 |
| Eco88I | CYCGRG | 1 cut(s) | 475 |
| Eco91I | GGTNACC | 1 cut(s) | 313 |
| EcoO65I | GGTNACC | 1 cut(s) | 313 |
| EcoRII | CCWGG | 2 cut(s) | 255, 522 |
| EcoT14I | CCWWGG | 2 cut(s) | 318, 561 |
| ErhI | CCWWGG | 2 cut(s) | 318, 561 |
| FaeI | CATG | 2 cut(s) | 322, 388 |
| FatI | CATG | 2 cut(s) | 318, 384 |
| Fnu4HI | GCNGC | 5 cut(s) | 414, 506, 668, 691, 729 |
| Fsp4HI | GCNGC | 5 cut(s) | 414, 506, 668, 691, 729 |
| FspBI | CTAG | 1 cut(s) | 455 |
| GlaI | GCGC | 1 cut(s) | 567 |
| GluI | GCNGC | 5 cut(s) | 414, 506, 668, 691, 729 |
| GsuI | CTGGAG | 1 cut(s) | 278 |
| HaeII | RGCGCY | 1 cut(s) | 569 |
| HaeIII | GGCC | 2 cut(s) | 575, 589 |
| HhaI | GCGC | 1 cut(s) | 568 |
| Hin1II | CATG | 2 cut(s) | 322, 388 |
| Hin6I | GCGC | 1 cut(s) | 566 |
| HinP1I | GCGC | 1 cut(s) | 566 |
| HinfI | GANTC | 2 cut(s) | 268, 280 |
| HphI | GGTGA | 2 cut(s) | 207, 416 |
| Hpy166II | GTNNAC | 1 cut(s) | 721 |
| Hpy188I | TCNGA | 5 cut(s) | 42, 277, 547, 611, 735 |
| Hpy188III | TCNNGA | 1 cut(s) | 346 |
| Hpy8I | GTNNAC | 1 cut(s) | 721 |
| HpyAV | CCTTC | 3 cut(s) | 156, 251, 730 |
| HpyCH4IV | ACGT | 1 cut(s) | 633 |
| HpyCH4V | TGCA | 3 cut(s) | 51, 232, 500 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 572 |
| HpyF3I | CTNAG | 3 cut(s) | 168, 515, 531 |
| HpySE526I | ACGT | 1 cut(s) | 633 |
| Hsp92II | CATG | 2 cut(s) | 322, 388 |
| HspAI | GCGC | 1 cut(s) | 566 |
| Kzo9I | GATC | 5 cut(s) | 141, 160, 223, 421, 673 |
| LguI | GCTCTTC | 1 cut(s) | 680 |
| Lsp1109I | GCAGC | 5 cut(s) | 425, 492, 654, 677, 740 |
| LweI | GCATC | 1 cut(s) | 547 |
| MaeI | CTAG | 1 cut(s) | 455 |
| MaeII | ACGT | 1 cut(s) | 633 |
| MaeIII | GTNAC | 6 cut(s) | 213, 294, 313, 404, 481, 626 |
| MalI | GATC | 5 cut(s) | 143, 162, 225, 423, 675 |
| MboI | GATC | 5 cut(s) | 141, 160, 223, 421, 673 |
| MboII | GAAGA | 4 cut(s) | 391, 431, 502, 697 |
| MflI | RGATCY | 3 cut(s) | 141, 160, 421 |
| MlsI | TGGCCA | 1 cut(s) | 575 |
| MluCI | AATT | 5 cut(s) | 247, 286, 438, 600, 640 |
| MluNI | TGGCCA | 1 cut(s) | 575 |
| MnlI | CCTC | 7 cut(s) | 151, 180, 253, 316, 386, 426, 471 |
| Mox20I | TGGCCA | 1 cut(s) | 575 |
| MroXI | GAANNNNTTC | 1 cut(s) | 353 |
| MscI | TGGCCA | 1 cut(s) | 575 |
| MseI | TTAA | 4 cut(s) | 65, 153, 246, 639 |
| MslI | CAYNNNNRTG | 1 cut(s) | 96 |
| Msp20I | TGGCCA | 1 cut(s) | 575 |
| MspA1I | CMGCKG | 1 cut(s) | 416 |
| MspR9I | CCNGG | 2 cut(s) | 257, 524 |
| MvaI | CCWGG | 2 cut(s) | 257, 524 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 572 |
| NcoI | CCATGG | 1 cut(s) | 318 |
| NdeII | GATC | 5 cut(s) | 141, 160, 223, 421, 673 |
| NlaIII | CATG | 2 cut(s) | 322, 388 |
| NlaIV | GGNNCC | 1 cut(s) | 162 |
| NmuCI | GTSAC | 2 cut(s) | 213, 404 |
| NspI | RCATGY | 1 cut(s) | 388 |
| PaeR7I | CTCGAG | 1 cut(s) | 475 |
| PaqCI | CACCTGC | 1 cut(s) | 42 |
| PciSI | GCTCTTC | 1 cut(s) | 680 |
| PdmI | GAANNNNTTC | 1 cut(s) | 353 |
| PfeI | GAWTC | 2 cut(s) | 268, 280 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 345 |
| PfoI | TCCNGGA | 1 cut(s) | 522 |
| PkrI | GCNGC | 5 cut(s) | 415, 507, 669, 692, 730 |
| Psp1406I | AACGTT | 1 cut(s) | 633 |
| Psp6I | CCWGG | 2 cut(s) | 255, 522 |
| PspEI | GGTNACC | 1 cut(s) | 313 |
| PspGI | CCWGG | 2 cut(s) | 255, 522 |
| PspN4I | GGNNCC | 1 cut(s) | 162 |
| PspPI | GGNCC | 1 cut(s) | 336 |
| PspXI | VCTCGAGB | 1 cut(s) | 475 |
| PsuI | RGATCY | 3 cut(s) | 141, 160, 421 |
| PvuII | CAGCTG | 1 cut(s) | 416 |
| RsaI | GTAC | 1 cut(s) | 203 |
| RsaNI | GTAC | 1 cut(s) | 202 |
| RseI | CAYNNNNRTG | 1 cut(s) | 96 |
| SapI | GCTCTTC | 1 cut(s) | 680 |
| SaqAI | TTAA | 4 cut(s) | 65, 153, 246, 639 |
| SatI | GCNGC | 5 cut(s) | 414, 506, 668, 691, 729 |
| Sau3AI | GATC | 5 cut(s) | 141, 160, 223, 421, 673 |
| Sau96I | GGNCC | 1 cut(s) | 336 |
| ScrFI | CCNGG | 2 cut(s) | 257, 524 |
| SfaNI | GCATC | 1 cut(s) | 547 |
| Sfr274I | CTCGAG | 1 cut(s) | 475 |
| SinI | GGWCC | 1 cut(s) | 336 |
| SlaI | CTCGAG | 1 cut(s) | 475 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 96 |
| SmlI | CTYRAG | 2 cut(s) | 107, 475 |
| SmoI | CTYRAG | 2 cut(s) | 107, 475 |
| Sse9I | AATT | 5 cut(s) | 247, 286, 438, 600, 640 |
| SspI | AATATT | 2 cut(s) | 183, 451 |
| SspMI | CTAG | 1 cut(s) | 455 |
| StyD4I | CCNGG | 2 cut(s) | 255, 522 |
| StyI | CCWWGG | 2 cut(s) | 318, 561 |
| TaiI | ACGT | 1 cut(s) | 636 |
| TaqI | TCGA | 1 cut(s) | 476 |
| TasI | AATT | 5 cut(s) | 247, 286, 438, 600, 640 |
| TfiI | GAWTC | 2 cut(s) | 268, 280 |
| Tru1I | TTAA | 4 cut(s) | 65, 153, 246, 639 |
| Tru9I | TTAA | 4 cut(s) | 65, 153, 246, 639 |
| TscAI | CASTG | 1 cut(s) | 176 |
| TseFI | GTSAC | 2 cut(s) | 213, 404 |
| TseI | GCWGC | 5 cut(s) | 413, 505, 667, 690, 728 |
| Tsp45I | GTSAC | 2 cut(s) | 213, 404 |
| TspDTI | ATGAA | 1 cut(s) | 24 |
| TspRI | CASTG | 1 cut(s) | 176 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 345 |
| VpaK11BI | GGWCC | 1 cut(s) | 336 |
| XapI | RAATTY | 1 cut(s) | 286 |
| XceI | RCATGY | 1 cut(s) | 388 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 568 |
| XhoI | CTCGAG | 1 cut(s) | 475 |
| XmnI | GAANNNNTTC | 1 cut(s) | 353 |
| XspI | CTAG | 1 cut(s) | 455 |