RchiOBHm_Chr2g0133671

Fatty acid amide

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
50541851 .. 50542332
482 bp
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UTR
Exon/CDS
Intron
PRQ50481

Sequence Viewer

Length: 189 bp
ATGACTCAGTTATTGAGGAACACTGTGATTCCAGAAGCACCCATGTTCAAACCTAAATTTCCTCCTCAAGAACCAGAAACCGGGGTTGTTGTTGTGGATGAGGATGGAAAACCAGAAGACAGAGTTGGAGTGGCCTTGAAATGTCTTCCAAACTATGATCCTGCTACCTGTTTGTTCGAAACAGTTTAA

Protein Analysis

62

Amino Acids

6.87

Weight (kDa)

4.49

Isoelectric Point (pI)

45.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024891)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0133671
rosa_multiflora Rmu_sc0000259.1_g000039
rosa_samantha Rh2BG492800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 152
AcsI RAATTY 1 cut(s) 56
AfiI CCNNNNNNNGG 1 cut(s) 80
AgsI TTSAA 2 cut(s) 49, 139
AjuI GAANNNNNNNTTGG 2 cut(s) 108, 140
AlwI GGATC 1 cut(s) 152
AoxI GGCC 1 cut(s) 132
ApoI RAATTY 1 cut(s) 56
AsuC2I CCSGG 1 cut(s) 82
AsuII TTCGAA 1 cut(s) 177
BbsI GAAGAC 2 cut(s) 123, 137
BccI CCATC 1 cut(s) 98
BcnI CCSGG 1 cut(s) 82
Bme1390I CCNGG 1 cut(s) 82
BmrFI CCNGG 1 cut(s) 82
BpiI GAAGAC 2 cut(s) 123, 137
Bpu14I TTCGAA 1 cut(s) 177
BpuEI CTTGAG 1 cut(s) 51
BpuMI CCSGG 1 cut(s) 82
BsaJI CCNNGG 1 cut(s) 81
Bsc4I CCNNNNNNNGG 1 cut(s) 80
BseDI CCNNGG 1 cut(s) 81
BseGI GGATG 2 cut(s) 103, 109
BseLI CCNNNNNNNGG 1 cut(s) 80
BseMII CTCAG 1 cut(s) 20
BseRI GAGGAG 1 cut(s) 54
BshFI GGCC 1 cut(s) 134
BsiSI CCGG 1 cut(s) 81
BslI CCNNNNNNNGG 1 cut(s) 80
BsnI GGCC 1 cut(s) 134
Bsp119I TTCGAA 1 cut(s) 177
Bsp143I GATC 1 cut(s) 157
BspANI GGCC 1 cut(s) 134
BspCNI CTCAG 1 cut(s) 19
BspPI GGATC 1 cut(s) 152
BspT104I TTCGAA 1 cut(s) 177
BssECI CCNNGG 1 cut(s) 81
BssMI GATC 1 cut(s) 157
Bst4CI ACNGT 2 cut(s) 25, 184
BstBI TTCGAA 1 cut(s) 177
BstDEI CTNAG 1 cut(s) 6
BstF5I GGATG 2 cut(s) 103, 109
BstKTI GATC 1 cut(s) 160
BstMBI GATC 1 cut(s) 157
BstSCI CCNGG 1 cut(s) 80
BstV2I GAAGAC 2 cut(s) 123, 137
BsuRI GGCC 1 cut(s) 134
BtsCI GGATG 2 cut(s) 103, 109
BtsIMutI CAGTG 1 cut(s) 21
CviAII CATG 1 cut(s) 43
CviJI RGCY 1 cut(s) 134
CviKI_1 RGCY 1 cut(s) 134
DdeI CTNAG 1 cut(s) 6
DpnI GATC 1 cut(s) 159
DpnII GATC 1 cut(s) 157
FaeI CATG 1 cut(s) 46
FaiI YATR 2 cut(s) 44, 156
FatI CATG 1 cut(s) 42
FokI GGATG 2 cut(s) 110, 116
HaeIII GGCC 1 cut(s) 134
HapII CCGG 1 cut(s) 81
Hin1II CATG 1 cut(s) 46
HinfI GANTC 2 cut(s) 4, 28
HpaII CCGG 1 cut(s) 81
Hpy188III TCNNGA 2 cut(s) 32, 68
HpyCH4III ACNGT 2 cut(s) 25, 184
HpyF3I CTNAG 1 cut(s) 6
Hsp92II CATG 1 cut(s) 46
Kzo9I GATC 1 cut(s) 157
LpnPI CCDG 6 cut(s) 45, 87, 94, 126, 174, 181
MalI GATC 1 cut(s) 159
MboI GATC 1 cut(s) 157
MboII GAAGA 2 cut(s) 128, 137
MluCI AATT 1 cut(s) 56
MmeI TCCRAC 1 cut(s) 106
MnlI CCTC 4 cut(s) 9, 72, 75, 94
MseI TTAA 1 cut(s) 187
MspI CCGG 1 cut(s) 81
MspR9I CCNGG 1 cut(s) 82
NciI CCSGG 1 cut(s) 82
NdeII GATC 1 cut(s) 157
NlaIII CATG 1 cut(s) 46
NspV TTCGAA 1 cut(s) 177
PfeI GAWTC 1 cut(s) 28
SaqAI TTAA 1 cut(s) 187
Sau3AI GATC 1 cut(s) 157
ScrFI CCNGG 1 cut(s) 82
SetI ASST 2 cut(s) 55, 170
SfuI TTCGAA 1 cut(s) 177
SmlI CTYRAG 1 cut(s) 66
SmoI CTYRAG 1 cut(s) 66
Sse9I AATT 1 cut(s) 56
StyD4I CCNGG 1 cut(s) 80
TaaI ACNGT 2 cut(s) 25, 184
TaqI TCGA 1 cut(s) 177
TasI AATT 1 cut(s) 56
TfiI GAWTC 1 cut(s) 28
Tru1I TTAA 1 cut(s) 187
Tru9I TTAA 1 cut(s) 187
TscAI CASTG 1 cut(s) 28
TspRI CASTG 1 cut(s) 28
XapI RAATTY 1 cut(s) 56
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.