RchiOBHm_Chr2g0148561

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
66326110 .. 66326360
251 bp
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UTR
Exon/CDS
Intron
PRQ51812

Sequence Viewer

Length: 186 bp
ATGTGGTTGTGCTTAGTCTTCTTGGTCTGTAATGTAGCAACAAGCTTTGTCTCTTGTACTTGGGTGAGAGAGCACGAGTTGTCTTCCAATTGTCTTGTGCAAGAGTGTTTTGTTTTCTTGTGCAGCCTTGTAGTCTTGTGCTTTTCTTCTGGTAATGTCTTCATCTTATCATTTGTCTCTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

61

Amino Acids

6.92

Weight (kDa)

5.48

Isoelectric Point (pI)

44.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0024800)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 58
AluBI AGCT 1 cut(s) 45
AluI AGCT 1 cut(s) 45
Alw21I GWGCWC 1 cut(s) 75
Alw26I GTCTC 2 cut(s) 55, 181
ApeKI GCWGC 1 cut(s) 123
AsuHPI GGTGA 1 cut(s) 76
BauI CACGAG 1 cut(s) 74
BbsI GAAGAC 3 cut(s) 10, 75, 151
Bbv12I GWGCWC 1 cut(s) 75
BbvI GCAGC 1 cut(s) 135
BcoDI GTCTC 2 cut(s) 55, 181
BfaI CTAG 1 cut(s) 180
BisI GCNGC 1 cut(s) 124
BlsI GCNGC 1 cut(s) 125
BpiI GAAGAC 3 cut(s) 10, 75, 151
BseXI GCAGC 1 cut(s) 135
BsgI GTGCAG 1 cut(s) 142
BsiHKAI GWGCWC 1 cut(s) 75
BsmAI GTCTC 2 cut(s) 55, 181
Bsp1286I GDGCHC 1 cut(s) 75
BssSI CACGAG 1 cut(s) 74
Bst2BI CACGAG 1 cut(s) 74
BstDEI CTNAG 1 cut(s) 13
BstMAI GTCTC 2 cut(s) 55, 181
BstV1I GCAGC 1 cut(s) 135
BstV2I GAAGAC 3 cut(s) 10, 75, 151
Csp6I GTAC 1 cut(s) 57
CviJI RGCY 2 cut(s) 45, 126
CviKI_1 RGCY 2 cut(s) 45, 126
CviQI GTAC 1 cut(s) 57
DdeI CTNAG 1 cut(s) 13
Fnu4HI GCNGC 1 cut(s) 124
Fsp4HI GCNGC 1 cut(s) 124
FspBI CTAG 1 cut(s) 180
FspEI CC 7 cut(s) 8, 46, 47, 100, 135, 140, 166
GluI GCNGC 1 cut(s) 124
HindIII AAGCTT 1 cut(s) 43
HphI GGTGA 1 cut(s) 76
HpyCH4V TGCA 2 cut(s) 100, 123
HpyF3I CTNAG 1 cut(s) 13
LpnPI CCDG 1 cut(s) 135
Lsp1109I GCAGC 1 cut(s) 135
MaeI CTAG 1 cut(s) 180
MboII GAAGA 4 cut(s) 10, 75, 138, 151
MfeI CAATTG 1 cut(s) 88
MhlI GDGCHC 1 cut(s) 75
MluCI AATT 1 cut(s) 88
MunI CAATTG 1 cut(s) 88
PkrI GCNGC 1 cut(s) 125
RsaI GTAC 1 cut(s) 58
RsaNI GTAC 1 cut(s) 57
SatI GCNGC 1 cut(s) 124
SduI GDGCHC 1 cut(s) 75
SetI ASST 2 cut(s) 47, 185
Sse9I AATT 1 cut(s) 88
SspMI CTAG 1 cut(s) 180
TasI AATT 1 cut(s) 88
TatI WGTACW 1 cut(s) 56
TseI GCWGC 1 cut(s) 123
TspDTI ATGAA 1 cut(s) 151
XspI CTAG 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.