HEAT repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0166401 |
| rosa_rugosa | Rorug02G0522700 |
| rosa_samantha | Rh2BG600900 Rh2CG571600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 131 |
| AciI | CCGC | 1 cut(s) | 464 |
| AcoI | YGGCCR | 1 cut(s) | 81 |
| AcsI | RAATTY | 1 cut(s) | 615 |
| AfaI | GTAC | 4 cut(s) | 9, 275, 298, 554 |
| AgsI | TTSAA | 4 cut(s) | 293, 383, 550, 625 |
| AhlI | ACTAGT | 2 cut(s) | 73, 454 |
| Alw21I | GWGCWC | 1 cut(s) | 436 |
| Alw26I | GTCTC | 1 cut(s) | 566 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 194 |
| AoxI | GGCC | 2 cut(s) | 81, 390 |
| ApoI | RAATTY | 1 cut(s) | 615 |
| AspS9I | GGNCC | 1 cut(s) | 37 |
| AsuHPI | GGTGA | 1 cut(s) | 599 |
| AvaII | GGWCC | 1 cut(s) | 37 |
| BalI | TGGCCA | 1 cut(s) | 83 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 32 |
| BauI | CACGAG | 1 cut(s) | 556 |
| Bbv12I | GWGCWC | 1 cut(s) | 436 |
| BccI | CCATC | 1 cut(s) | 578 |
| BciVI | GTATCC | 1 cut(s) | 172 |
| BcoDI | GTCTC | 1 cut(s) | 566 |
| BcuI | ACTAGT | 2 cut(s) | 73, 454 |
| BfaI | CTAG | 4 cut(s) | 74, 437, 455, 628 |
| BfuAI | ACCTGC | 1 cut(s) | 131 |
| BfuI | GTATCC | 1 cut(s) | 172 |
| BisI | GCNGC | 1 cut(s) | 465 |
| BlsI | GCNGC | 1 cut(s) | 466 |
| Bme18I | GGWCC | 1 cut(s) | 37 |
| BmgT120I | GGNCC | 1 cut(s) | 37 |
| BmsI | GCATC | 1 cut(s) | 432 |
| BsaJI | CCNNGG | 1 cut(s) | 324 |
| BsaWI | WCCGGW | 1 cut(s) | 34 |
| Bse1I | ACTGG | 1 cut(s) | 393 |
| BseDI | CCNNGG | 1 cut(s) | 324 |
| BseNI | ACTGG | 1 cut(s) | 393 |
| BshFI | GGCC | 2 cut(s) | 83, 392 |
| BsiHKAI | GWGCWC | 1 cut(s) | 436 |
| BsiSI | CCGG | 1 cut(s) | 35 |
| BslFI | GGGAC | 1 cut(s) | 494 |
| BsmAI | GTCTC | 1 cut(s) | 566 |
| BsmFI | GGGAC | 1 cut(s) | 494 |
| BsnI | GGCC | 2 cut(s) | 83, 392 |
| Bsp1286I | GDGCHC | 1 cut(s) | 436 |
| Bsp143I | GATC | 2 cut(s) | 50, 606 |
| BspACI | CCGC | 1 cut(s) | 464 |
| BspANI | GGCC | 2 cut(s) | 83, 392 |
| BspMI | ACCTGC | 1 cut(s) | 131 |
| BsrI | ACTGG | 1 cut(s) | 393 |
| BssECI | CCNNGG | 1 cut(s) | 324 |
| BssMI | GATC | 2 cut(s) | 50, 606 |
| BssSI | CACGAG | 1 cut(s) | 556 |
| BssT1I | CCWWGG | 1 cut(s) | 324 |
| Bst2BI | CACGAG | 1 cut(s) | 556 |
| Bst4CI | ACNGT | 2 cut(s) | 7, 377 |
| BstKTI | GATC | 2 cut(s) | 53, 609 |
| BstMAI | GTCTC | 1 cut(s) | 566 |
| BstMBI | GATC | 2 cut(s) | 50, 606 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 251, 470 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 313 |
| BsuI | GTATCC | 1 cut(s) | 172 |
| BsuRI | GGCC | 2 cut(s) | 83, 392 |
| BtsI | GCAGTG | 1 cut(s) | 261 |
| BtsIMutI | CAGTG | 2 cut(s) | 195, 261 |
| BveI | ACCTGC | 1 cut(s) | 131 |
| CaiI | CAGNNNCTG | 1 cut(s) | 194 |
| Cfr13I | GGNCC | 1 cut(s) | 37 |
| Csp6I | GTAC | 4 cut(s) | 8, 274, 297, 553 |
| CviAII | CATG | 2 cut(s) | 163, 174 |
| CviJI | RGCY | 3 cut(s) | 83, 232, 392 |
| CviKI_1 | RGCY | 3 cut(s) | 83, 232, 392 |
| CviQI | GTAC | 4 cut(s) | 8, 274, 297, 553 |
| DpnI | GATC | 2 cut(s) | 52, 608 |
| DpnII | GATC | 2 cut(s) | 50, 606 |
| DraI | TTTAAA | 1 cut(s) | 99 |
| EaeI | YGGCCR | 1 cut(s) | 81 |
| Eco130I | CCWWGG | 1 cut(s) | 324 |
| Eco32I | GATATC | 1 cut(s) | 339 |
| Eco47I | GGWCC | 1 cut(s) | 37 |
| EcoRV | GATATC | 1 cut(s) | 339 |
| EcoT14I | CCWWGG | 1 cut(s) | 324 |
| ErhI | CCWWGG | 1 cut(s) | 324 |
| FaeI | CATG | 2 cut(s) | 166, 177 |
| FaqI | GGGAC | 1 cut(s) | 494 |
| FatI | CATG | 2 cut(s) | 162, 173 |
| Fnu4HI | GCNGC | 1 cut(s) | 465 |
| Fsp4HI | GCNGC | 1 cut(s) | 465 |
| FspBI | CTAG | 4 cut(s) | 74, 437, 455, 628 |
| GluI | GCNGC | 1 cut(s) | 465 |
| HaeIII | GGCC | 2 cut(s) | 83, 392 |
| HapII | CCGG | 1 cut(s) | 35 |
| Hin1II | CATG | 2 cut(s) | 166, 177 |
| HinfI | GANTC | 3 cut(s) | 103, 498, 559 |
| HpaII | CCGG | 1 cut(s) | 35 |
| HphI | GGTGA | 1 cut(s) | 599 |
| Hpy166II | GTNNAC | 2 cut(s) | 373, 555 |
| Hpy188I | TCNGA | 2 cut(s) | 408, 503 |
| Hpy188III | TCNNGA | 1 cut(s) | 314 |
| Hpy8I | GTNNAC | 2 cut(s) | 373, 555 |
| HpyAV | CCTTC | 3 cut(s) | 22, 26, 67 |
| HpyCH4III | ACNGT | 2 cut(s) | 7, 377 |
| HpyCH4V | TGCA | 3 cut(s) | 140, 162, 445 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 251, 470 |
| Hsp92II | CATG | 2 cut(s) | 166, 177 |
| Kzo9I | GATC | 2 cut(s) | 50, 606 |
| LpnPI | CCDG | 9 cut(s) | 48, 126, 228, 236, 246, 299, 406, 595, 617 |
| LweI | GCATC | 1 cut(s) | 432 |
| MaeI | CTAG | 4 cut(s) | 74, 437, 455, 628 |
| MaeIII | GTNAC | 2 cut(s) | 352, 488 |
| MalI | GATC | 2 cut(s) | 52, 608 |
| MboI | GATC | 2 cut(s) | 50, 606 |
| MboII | GAAGA | 1 cut(s) | 45 |
| MhlI | GDGCHC | 1 cut(s) | 436 |
| MlsI | TGGCCA | 1 cut(s) | 83 |
| MluCI | AATT | 4 cut(s) | 169, 418, 483, 615 |
| MluNI | TGGCCA | 1 cut(s) | 83 |
| MlyI | GAGTC | 1 cut(s) | 568 |
| MnlI | CCTC | 4 cut(s) | 50, 287, 322, 352 |
| Mox20I | TGGCCA | 1 cut(s) | 83 |
| MscI | TGGCCA | 1 cut(s) | 83 |
| MseI | TTAA | 3 cut(s) | 98, 131, 482 |
| MslI | CAYNNNNRTG | 1 cut(s) | 74 |
| Msp20I | TGGCCA | 1 cut(s) | 83 |
| MspI | CCGG | 1 cut(s) | 35 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 251, 470 |
| NdeII | GATC | 2 cut(s) | 50, 606 |
| NlaIII | CATG | 2 cut(s) | 166, 177 |
| NmuCI | GTSAC | 1 cut(s) | 352 |
| PfeI | GAWTC | 2 cut(s) | 103, 498 |
| PkrI | GCNGC | 1 cut(s) | 466 |
| PleI | GAGTC | 1 cut(s) | 567 |
| PpsI | GAGTC | 1 cut(s) | 567 |
| PspPI | GGNCC | 1 cut(s) | 37 |
| PstNI | CAGNNNCTG | 1 cut(s) | 194 |
| RsaI | GTAC | 4 cut(s) | 9, 275, 298, 554 |
| RsaNI | GTAC | 4 cut(s) | 8, 274, 297, 553 |
| RseI | CAYNNNNRTG | 1 cut(s) | 74 |
| SaqAI | TTAA | 3 cut(s) | 98, 131, 482 |
| SatI | GCNGC | 1 cut(s) | 465 |
| Sau3AI | GATC | 2 cut(s) | 50, 606 |
| Sau96I | GGNCC | 1 cut(s) | 37 |
| SchI | GAGTC | 1 cut(s) | 568 |
| SduI | GDGCHC | 1 cut(s) | 436 |
| SetI | ASST | 3 cut(s) | 145, 279, 606 |
| SfaNI | GCATC | 1 cut(s) | 432 |
| SinI | GGWCC | 1 cut(s) | 37 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 74 |
| SpeI | ACTAGT | 2 cut(s) | 73, 454 |
| Sse9I | AATT | 4 cut(s) | 169, 418, 483, 615 |
| SsiI | CCGC | 1 cut(s) | 464 |
| SspI | AATATT | 2 cut(s) | 348, 545 |
| SspMI | CTAG | 4 cut(s) | 74, 437, 455, 628 |
| StyI | CCWWGG | 1 cut(s) | 324 |
| TaaI | ACNGT | 2 cut(s) | 7, 377 |
| TaqI | TCGA | 1 cut(s) | 49 |
| TasI | AATT | 4 cut(s) | 169, 418, 483, 615 |
| TatI | WGTACW | 1 cut(s) | 552 |
| TauI | GCSGC | 1 cut(s) | 467 |
| TfiI | GAWTC | 2 cut(s) | 103, 498 |
| Tru1I | TTAA | 3 cut(s) | 98, 131, 482 |
| Tru9I | TTAA | 3 cut(s) | 98, 131, 482 |
| TscAI | CASTG | 2 cut(s) | 195, 261 |
| TseFI | GTSAC | 1 cut(s) | 352 |
| Tsp45I | GTSAC | 1 cut(s) | 352 |
| TspDTI | ATGAA | 6 cut(s) | 49, 58, 82, 115, 162, 555 |
| TspRI | CASTG | 2 cut(s) | 195, 261 |
| VpaK11BI | GGWCC | 1 cut(s) | 37 |
| XapI | RAATTY | 1 cut(s) | 615 |
| XspI | CTAG | 4 cut(s) | 74, 437, 455, 628 |