HEAT repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0166401 |
| rosa_rugosa | Rorug02G0522700 |
| rosa_samantha | Rh2BG600900 Rh2CG571600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 341 |
| AclWI | GGATC | 1 cut(s) | 47 |
| AcuI | CTGAAG | 1 cut(s) | 531 |
| AfaI | GTAC | 2 cut(s) | 203, 226 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 504 |
| AgsI | TTSAA | 4 cut(s) | 221, 311, 427, 914 |
| AhlI | ACTAGT | 1 cut(s) | 331 |
| AluBI | AGCT | 2 cut(s) | 757, 776 |
| AluI | AGCT | 2 cut(s) | 757, 776 |
| Alw21I | GWGCWC | 1 cut(s) | 533 |
| Alw26I | GTCTC | 1 cut(s) | 858 |
| AlwI | GGATC | 1 cut(s) | 47 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 47, 122 |
| AoxI | GGCC | 1 cut(s) | 506 |
| ApeKI | GCWGC | 1 cut(s) | 47 |
| AspLEI | GCGC | 1 cut(s) | 910 |
| AsuHPI | GGTGA | 1 cut(s) | 611 |
| BanII | GRGCYC | 1 cut(s) | 826 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 464, 496 |
| Bbv12I | GWGCWC | 1 cut(s) | 533 |
| BbvCI | CCTCAGC | 1 cut(s) | 574 |
| BbvI | GCAGC | 1 cut(s) | 34 |
| BciVI | GTATCC | 1 cut(s) | 100 |
| BcoDI | GTCTC | 1 cut(s) | 858 |
| BcuI | ACTAGT | 1 cut(s) | 331 |
| BfaI | CTAG | 1 cut(s) | 332 |
| BfmI | CTRYAG | 1 cut(s) | 48 |
| BfoI | RGCGCY | 1 cut(s) | 911 |
| BfuI | GTATCC | 1 cut(s) | 100 |
| BisI | GCNGC | 2 cut(s) | 48, 342 |
| BlsI | GCNGC | 2 cut(s) | 49, 343 |
| BmsI | GCATC | 1 cut(s) | 309 |
| Bpu10I | CCTNAGC | 1 cut(s) | 574 |
| BpuEI | CTTGAG | 2 cut(s) | 546, 645 |
| BsaJI | CCNNGG | 2 cut(s) | 252, 981 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 55, 85 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 504 |
| Bse118I | RCCGGY | 1 cut(s) | 504 |
| Bse1I | ACTGG | 1 cut(s) | 719 |
| BseDI | CCNNGG | 2 cut(s) | 252, 981 |
| BseGI | GGATG | 3 cut(s) | 598, 973, 997 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 504 |
| BseMII | CTCAG | 2 cut(s) | 588, 966 |
| BseNI | ACTGG | 1 cut(s) | 719 |
| BseRI | GAGGAG | 1 cut(s) | 76 |
| BseXI | GCAGC | 1 cut(s) | 34 |
| BseYI | CCCAGC | 1 cut(s) | 780 |
| BshFI | GGCC | 1 cut(s) | 508 |
| BsiHKAI | GWGCWC | 1 cut(s) | 533 |
| BsiSI | CCGG | 1 cut(s) | 505 |
| BslFI | GGGAC | 1 cut(s) | 371 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 504 |
| BsmAI | GTCTC | 1 cut(s) | 858 |
| BsmFI | GGGAC | 1 cut(s) | 371 |
| BsnI | GGCC | 1 cut(s) | 508 |
| Bsp1286I | GDGCHC | 2 cut(s) | 533, 826 |
| Bsp143I | GATC | 3 cut(s) | 52, 65, 828 |
| BspACI | CCGC | 1 cut(s) | 341 |
| BspANI | GGCC | 1 cut(s) | 508 |
| BspCNI | CTCAG | 2 cut(s) | 587, 967 |
| BspMAI | CTGCAG | 1 cut(s) | 52 |
| BspPI | GGATC | 1 cut(s) | 47 |
| BsrFI | RCCGGY | 1 cut(s) | 504 |
| BsrI | ACTGG | 1 cut(s) | 719 |
| BssAI | RCCGGY | 1 cut(s) | 504 |
| BssECI | CCNNGG | 2 cut(s) | 252, 981 |
| BssMI | GATC | 3 cut(s) | 52, 65, 828 |
| BssT1I | CCWWGG | 1 cut(s) | 252 |
| Bst4CI | ACNGT | 6 cut(s) | 305, 485, 730, 750, 797, 959 |
| Bst6I | CTCTTC | 1 cut(s) | 993 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 607 |
| BstDEI | CTNAG | 3 cut(s) | 524, 574, 975 |
| BstF5I | GGATG | 3 cut(s) | 598, 973, 997 |
| BstH2I | RGCGCY | 1 cut(s) | 911 |
| BstHHI | GCGC | 1 cut(s) | 910 |
| BstKTI | GATC | 3 cut(s) | 55, 68, 831 |
| BstMAI | GTCTC | 1 cut(s) | 858 |
| BstMBI | GATC | 3 cut(s) | 52, 65, 828 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 179, 347, 607 |
| BstSFI | CTRYAG | 1 cut(s) | 48 |
| BstV1I | GCAGC | 1 cut(s) | 34 |
| BstX2I | RGATCY | 1 cut(s) | 52 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 241 |
| BstYI | RGATCY | 1 cut(s) | 52 |
| BsuI | GTATCC | 1 cut(s) | 100 |
| BsuRI | GGCC | 1 cut(s) | 508 |
| BtsCI | GGATG | 3 cut(s) | 598, 973, 997 |
| BtsI | GCAGTG | 2 cut(s) | 189, 531 |
| BtsIMutI | CAGTG | 6 cut(s) | 123, 189, 531, 726, 735, 802 |
| CaiI | CAGNNNCTG | 2 cut(s) | 47, 122 |
| CfoI | GCGC | 1 cut(s) | 910 |
| Cfr10I | RCCGGY | 1 cut(s) | 504 |
| Csp6I | GTAC | 2 cut(s) | 202, 225 |
| CviAII | CATG | 5 cut(s) | 91, 102, 554, 881, 891 |
| CviJI | RGCY | 7 cut(s) | 47, 451, 508, 688, 757, 776, 824 |
| CviKI_1 | RGCY | 7 cut(s) | 47, 451, 508, 688, 757, 776, 824 |
| CviQI | GTAC | 2 cut(s) | 202, 225 |
| DdeI | CTNAG | 3 cut(s) | 524, 574, 975 |
| DpnI | GATC | 3 cut(s) | 54, 67, 830 |
| DpnII | GATC | 3 cut(s) | 52, 65, 828 |
| Eam1104I | CTCTTC | 1 cut(s) | 993 |
| EarI | CTCTTC | 1 cut(s) | 993 |
| Eco130I | CCWWGG | 1 cut(s) | 252 |
| Eco24I | GRGCYC | 1 cut(s) | 826 |
| Eco32I | GATATC | 2 cut(s) | 39, 267 |
| Eco57I | CTGAAG | 1 cut(s) | 531 |
| EcoRV | GATATC | 2 cut(s) | 39, 267 |
| EcoT14I | CCWWGG | 1 cut(s) | 252 |
| EcoT38I | GRGCYC | 1 cut(s) | 826 |
| ErhI | CCWWGG | 1 cut(s) | 252 |
| FaeI | CATG | 5 cut(s) | 94, 105, 557, 884, 894 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 532, 564 |
| FaqI | GGGAC | 1 cut(s) | 371 |
| FatI | CATG | 5 cut(s) | 90, 101, 553, 880, 890 |
| Fnu4HI | GCNGC | 2 cut(s) | 48, 342 |
| FokI | GGATG | 2 cut(s) | 605, 980 |
| FriOI | GRGCYC | 1 cut(s) | 826 |
| Fsp4HI | GCNGC | 2 cut(s) | 48, 342 |
| FspBI | CTAG | 1 cut(s) | 332 |
| GlaI | GCGC | 1 cut(s) | 909 |
| GluI | GCNGC | 2 cut(s) | 48, 342 |
| GsaI | CCCAGC | 1 cut(s) | 784 |
| HaeII | RGCGCY | 1 cut(s) | 911 |
| HaeIII | GGCC | 1 cut(s) | 508 |
| HapII | CCGG | 1 cut(s) | 505 |
| HhaI | GCGC | 1 cut(s) | 910 |
| Hin1II | CATG | 5 cut(s) | 94, 105, 557, 884, 894 |
| Hin6I | GCGC | 1 cut(s) | 908 |
| HinP1I | GCGC | 1 cut(s) | 908 |
| HinfI | GANTC | 7 cut(s) | 30, 375, 494, 616, 658, 971, 977 |
| HpaII | CCGG | 1 cut(s) | 505 |
| HphI | GGTGA | 1 cut(s) | 611 |
| Hpy166II | GTNNAC | 3 cut(s) | 301, 583, 897 |
| Hpy188I | TCNGA | 7 cut(s) | 43, 380, 615, 863, 967, 976, 982 |
| Hpy188III | TCNNGA | 4 cut(s) | 34, 242, 498, 662 |
| Hpy8I | GTNNAC | 3 cut(s) | 301, 583, 897 |
| HpyAV | CCTTC | 2 cut(s) | 466, 579 |
| HpyCH4III | ACNGT | 6 cut(s) | 305, 485, 730, 750, 797, 959 |
| HpyCH4V | TGCA | 3 cut(s) | 50, 90, 322 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 179, 347, 607 |
| HpyF3I | CTNAG | 3 cut(s) | 524, 574, 975 |
| Hsp92II | CATG | 5 cut(s) | 94, 105, 557, 884, 894 |
| HspAI | GCGC | 1 cut(s) | 908 |
| Kzo9I | GATC | 3 cut(s) | 52, 65, 828 |
| LmnI | GCTCC | 1 cut(s) | 528 |
| Lsp1109I | GCAGC | 1 cut(s) | 34 |
| LweI | GCATC | 1 cut(s) | 309 |
| MaeI | CTAG | 1 cut(s) | 332 |
| MaeIII | GTNAC | 3 cut(s) | 280, 365, 655 |
| MalI | GATC | 3 cut(s) | 54, 67, 830 |
| MboI | GATC | 3 cut(s) | 52, 65, 828 |
| MboII | GAAGA | 1 cut(s) | 812 |
| MflI | RGATCY | 1 cut(s) | 52 |
| MhlI | GDGCHC | 2 cut(s) | 533, 826 |
| MluCI | AATT | 5 cut(s) | 97, 360, 629, 713, 870 |
| MlyI | GAGTC | 4 cut(s) | 610, 652, 980, 986 |
| MseI | TTAA | 2 cut(s) | 359, 588 |
| MspI | CCGG | 1 cut(s) | 505 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 179, 347, 607 |
| NdeII | GATC | 3 cut(s) | 52, 65, 828 |
| NlaIII | CATG | 5 cut(s) | 94, 105, 557, 884, 894 |
| NmuCI | GTSAC | 2 cut(s) | 280, 655 |
| PfeI | GAWTC | 3 cut(s) | 30, 375, 494 |
| PkrI | GCNGC | 2 cut(s) | 49, 343 |
| PleI | GAGTC | 4 cut(s) | 610, 652, 979, 985 |
| PpsI | GAGTC | 4 cut(s) | 610, 652, 979, 985 |
| PspFI | CCCAGC | 1 cut(s) | 780 |
| PstI | CTGCAG | 1 cut(s) | 52 |
| PstNI | CAGNNNCTG | 2 cut(s) | 47, 122 |
| PsuI | RGATCY | 1 cut(s) | 52 |
| RsaI | GTAC | 2 cut(s) | 203, 226 |
| RsaNI | GTAC | 2 cut(s) | 202, 225 |
| SaqAI | TTAA | 2 cut(s) | 359, 588 |
| SatI | GCNGC | 2 cut(s) | 48, 342 |
| Sau3AI | GATC | 3 cut(s) | 52, 65, 828 |
| SchI | GAGTC | 4 cut(s) | 610, 652, 980, 986 |
| SduI | GDGCHC | 2 cut(s) | 533, 826 |
| SetI | ASST | 4 cut(s) | 73, 207, 759, 778 |
| SfaNI | GCATC | 1 cut(s) | 309 |
| SfcI | CTRYAG | 1 cut(s) | 48 |
| SmlI | CTYRAG | 2 cut(s) | 561, 660 |
| SmoI | CTYRAG | 2 cut(s) | 561, 660 |
| SpeI | ACTAGT | 1 cut(s) | 331 |
| Sse9I | AATT | 5 cut(s) | 97, 360, 629, 713, 870 |
| SsiI | CCGC | 1 cut(s) | 341 |
| SspI | AATATT | 2 cut(s) | 276, 422 |
| SspMI | CTAG | 1 cut(s) | 332 |
| StyI | CCWWGG | 1 cut(s) | 252 |
| TaaI | ACNGT | 6 cut(s) | 305, 485, 730, 750, 797, 959 |
| TasI | AATT | 5 cut(s) | 97, 360, 629, 713, 870 |
| TauI | GCSGC | 1 cut(s) | 344 |
| TfiI | GAWTC | 3 cut(s) | 30, 375, 494 |
| Tru1I | TTAA | 2 cut(s) | 359, 588 |
| Tru9I | TTAA | 2 cut(s) | 359, 588 |
| TscAI | CASTG | 6 cut(s) | 123, 189, 538, 726, 735, 802 |
| TseFI | GTSAC | 2 cut(s) | 280, 655 |
| TseI | GCWGC | 1 cut(s) | 47 |
| Tsp45I | GTSAC | 2 cut(s) | 280, 655 |
| TspDTI | ATGAA | 5 cut(s) | 90, 171, 432, 687, 698 |
| TspRI | CASTG | 6 cut(s) | 123, 189, 538, 726, 735, 802 |
| XspI | CTAG | 1 cut(s) | 332 |