RchiOBHm_Chr2g0169481
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
83732132 .. 83734015
1884 bp
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UTR
Exon/CDS
Intron
PRQ53707

Sequence Viewer

Length: 123 bp
ATGAGAATAATCTCGTCGTCGGTTAGCCAGTCGCCGTCTTTGGGCTCAGCCATGGCCACAGCTGCGTTGCTCCGATCTCTACGACGTCATGACCTCGCTTCAACCCCTCTTTGTGCCTACTAA
Functional Annotation

Protein Analysis

40

Amino Acids

4.22

Weight (kDa)

10.69

Isoelectric Point (pI)

91.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021356)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0169481 RchiOBHm_Chr2g0174901
rosa_laevigata RLG00000008426
rosa_samantha Rh2CG409800 Rh6AG075900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 88
AcoI YGGCCR 1 cut(s) 54
AcyI GRCGYC 1 cut(s) 85
AfiI CCNNNNNNNGG 1 cut(s) 41
AgsI TTSAA 1 cut(s) 102
AluBI AGCT 1 cut(s) 62
AluI AGCT 1 cut(s) 62
AoxI GGCC 1 cut(s) 54
ApeKI GCWGC 1 cut(s) 62
BalI TGGCCA 1 cut(s) 56
BanII GRGCYC 1 cut(s) 47
BbvI GCAGC 1 cut(s) 49
BceAI ACGGC 1 cut(s) 19
BisI GCNGC 1 cut(s) 63
BlpI GCTNAGC 1 cut(s) 46
BlsI GCNGC 1 cut(s) 64
Bpu1102I GCTNAGC 1 cut(s) 46
BsaHI GRCGYC 1 cut(s) 85
BsaJI CCNNGG 1 cut(s) 51
Bsc4I CCNNNNNNNGG 1 cut(s) 41
Bse1I ACTGG 1 cut(s) 28
BseDI CCNNGG 1 cut(s) 51
BseLI CCNNNNNNNGG 1 cut(s) 41
BseMII CTCAG 1 cut(s) 60
BseNI ACTGG 1 cut(s) 28
BseXI GCAGC 1 cut(s) 49
BshFI GGCC 1 cut(s) 56
BslI CCNNNNNNNGG 1 cut(s) 41
BsnI GGCC 1 cut(s) 56
Bsp1286I GDGCHC 1 cut(s) 47
Bsp143I GATC 1 cut(s) 74
Bsp1720I GCTNAGC 1 cut(s) 46
Bsp19I CCATGG 1 cut(s) 51
BspANI GGCC 1 cut(s) 56
BspCNI CTCAG 1 cut(s) 59
BspHI TCATGA 1 cut(s) 88
BsrI ACTGG 1 cut(s) 28
BssECI CCNNGG 1 cut(s) 51
BssMI GATC 1 cut(s) 74
BssNI GRCGYC 1 cut(s) 85
BssT1I CCWWGG 1 cut(s) 51
BstACI GRCGYC 1 cut(s) 85
BstDEI CTNAG 1 cut(s) 46
BstDSI CCRYGG 1 cut(s) 51
BstKTI GATC 1 cut(s) 77
BstMBI GATC 1 cut(s) 74
BstMWI GCNNNNNNNGC 1 cut(s) 62
BstV1I GCAGC 1 cut(s) 49
BsuRI GGCC 1 cut(s) 56
BtgI CCRYGG 1 cut(s) 51
CciI TCATGA 1 cut(s) 88
CviAII CATG 2 cut(s) 52, 89
CviJI RGCY 5 cut(s) 27, 45, 50, 56, 62
CviKI_1 RGCY 5 cut(s) 27, 45, 50, 56, 62
DdeI CTNAG 1 cut(s) 46
DpnI GATC 1 cut(s) 76
DpnII GATC 1 cut(s) 74
EaeI YGGCCR 1 cut(s) 54
Eco130I CCWWGG 1 cut(s) 51
Eco24I GRGCYC 1 cut(s) 47
EcoT14I CCWWGG 1 cut(s) 51
EcoT38I GRGCYC 1 cut(s) 47
ErhI CCWWGG 1 cut(s) 51
FaeI CATG 2 cut(s) 55, 92
FaiI YATR 2 cut(s) 53, 90
FatI CATG 2 cut(s) 51, 88
Fnu4HI GCNGC 1 cut(s) 63
FriOI GRGCYC 1 cut(s) 47
Fsp4HI GCNGC 1 cut(s) 63
GluI GCNGC 1 cut(s) 63
HaeIII GGCC 1 cut(s) 56
Hin1I GRCGYC 1 cut(s) 85
Hin1II CATG 2 cut(s) 55, 92
Hpy188I TCNGA 1 cut(s) 74
Hpy188III TCNNGA 1 cut(s) 89
Hpy99I CGWCG 3 cut(s) 19, 22, 87
HpyCH4IV ACGT 1 cut(s) 85
HpyF10VI GCNNNNNNNGC 1 cut(s) 62
HpyF3I CTNAG 1 cut(s) 46
HpySE526I ACGT 1 cut(s) 85
Hsp92I GRCGYC 1 cut(s) 85
Hsp92II CATG 2 cut(s) 55, 92
Kzo9I GATC 1 cut(s) 74
LmnI GCTCC 1 cut(s) 75
LpnPI CCDG 1 cut(s) 41
Lsp1109I GCAGC 1 cut(s) 49
MaeII ACGT 1 cut(s) 85
MalI GATC 1 cut(s) 76
MboI GATC 1 cut(s) 74
MhlI GDGCHC 1 cut(s) 47
MlsI TGGCCA 1 cut(s) 56
MluNI TGGCCA 1 cut(s) 56
MnlI CCTC 2 cut(s) 104, 117
Mox20I TGGCCA 1 cut(s) 56
MscI TGGCCA 1 cut(s) 56
Msp20I TGGCCA 1 cut(s) 56
MspA1I CMGCKG 1 cut(s) 62
MwoI GCNNNNNNNGC 1 cut(s) 62
NcoI CCATGG 1 cut(s) 51
NdeII GATC 1 cut(s) 74
NlaIII CATG 2 cut(s) 55, 92
PagI TCATGA 1 cut(s) 88
PkrI GCNGC 1 cut(s) 64
PvuII CAGCTG 1 cut(s) 62
SatI GCNGC 1 cut(s) 63
Sau3AI GATC 1 cut(s) 74
SduI GDGCHC 1 cut(s) 47
SetI ASST 3 cut(s) 64, 88, 96
SgeI CNNG 5 cut(s) 25, 40, 64, 101, 107
StyI CCWWGG 1 cut(s) 51
TaiI ACGT 1 cut(s) 88
TseI GCWGC 1 cut(s) 62
ZraI GACGTC 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.