HECT-like Ubiquitin-conjugating enzyme (E2)-binding
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0390451 |
| rosa_roxburghii | Rroxscaffold_3G00238280 |
| rosa_samantha | Rh2CG431300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 8, 23 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 96 |
| AjnI | CCWGG | 1 cut(s) | 14 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 11, 43 |
| AluBI | AGCT | 1 cut(s) | 52 |
| AluI | AGCT | 1 cut(s) | 52 |
| AoxI | GGCC | 1 cut(s) | 87 |
| ApeKI | GCWGC | 1 cut(s) | 124 |
| AspS9I | GGNCC | 2 cut(s) | 87, 100 |
| AvaII | GGWCC | 1 cut(s) | 100 |
| BbvI | GCAGC | 1 cut(s) | 111 |
| BceAI | ACGGC | 1 cut(s) | 74 |
| BciT130I | CCWGG | 1 cut(s) | 16 |
| BglII | AGATCT | 1 cut(s) | 113 |
| BisI | GCNGC | 1 cut(s) | 125 |
| BlsI | GCNGC | 1 cut(s) | 126 |
| Bme1390I | CCNGG | 1 cut(s) | 16 |
| Bme18I | GGWCC | 1 cut(s) | 100 |
| BmgT120I | GGNCC | 2 cut(s) | 87, 100 |
| BmiI | GGNNCC | 1 cut(s) | 101 |
| BmrFI | CCNGG | 1 cut(s) | 16 |
| BsaJI | CCNNGG | 2 cut(s) | 27, 90 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 23, 53 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 96 |
| BseBI | CCWGG | 1 cut(s) | 16 |
| BseDI | CCNNGG | 2 cut(s) | 27, 90 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BseMII | CTCAG | 1 cut(s) | 124 |
| BseXI | GCAGC | 1 cut(s) | 111 |
| BshFI | GGCC | 1 cut(s) | 89 |
| BslFI | GGGAC | 1 cut(s) | 113 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BsmFI | GGGAC | 1 cut(s) | 113 |
| BsnI | GGCC | 1 cut(s) | 89 |
| Bsp143I | GATC | 2 cut(s) | 70, 113 |
| BspANI | GGCC | 1 cut(s) | 89 |
| BspCNI | CTCAG | 1 cut(s) | 123 |
| BspLI | GGNNCC | 1 cut(s) | 101 |
| BssECI | CCNNGG | 2 cut(s) | 27, 90 |
| BssMI | GATC | 2 cut(s) | 70, 113 |
| BssNAI | GTATAC | 1 cut(s) | 24 |
| BssT1I | CCWWGG | 1 cut(s) | 27 |
| Bst1107I | GTATAC | 1 cut(s) | 24 |
| Bst2UI | CCWGG | 1 cut(s) | 16 |
| BstDEI | CTNAG | 1 cut(s) | 110 |
| BstDSI | CCRYGG | 1 cut(s) | 90 |
| BstKTI | GATC | 2 cut(s) | 73, 116 |
| BstMBI | GATC | 2 cut(s) | 70, 113 |
| BstNI | CCWGG | 1 cut(s) | 16 |
| BstSCI | CCNGG | 1 cut(s) | 14 |
| BstV1I | GCAGC | 1 cut(s) | 111 |
| BstX2I | RGATCY | 1 cut(s) | 113 |
| BstYI | RGATCY | 1 cut(s) | 113 |
| BstZ17I | GTATAC | 1 cut(s) | 24 |
| BsuRI | GGCC | 1 cut(s) | 89 |
| BtgI | CCRYGG | 1 cut(s) | 90 |
| Cfr13I | GGNCC | 2 cut(s) | 87, 100 |
| CviAII | CATG | 1 cut(s) | 139 |
| CviJI | RGCY | 2 cut(s) | 52, 89 |
| CviKI_1 | RGCY | 2 cut(s) | 52, 89 |
| DdeI | CTNAG | 1 cut(s) | 110 |
| DpnI | GATC | 2 cut(s) | 72, 115 |
| DpnII | GATC | 2 cut(s) | 70, 113 |
| Eco130I | CCWWGG | 1 cut(s) | 27 |
| Eco47I | GGWCC | 1 cut(s) | 100 |
| EcoO109I | RGGNCCY | 1 cut(s) | 100 |
| EcoRII | CCWGG | 1 cut(s) | 14 |
| EcoT14I | CCWWGG | 1 cut(s) | 27 |
| ErhI | CCWWGG | 1 cut(s) | 27 |
| FaeI | CATG | 1 cut(s) | 142 |
| FaiI | YATR | 3 cut(s) | 24, 140, 145 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 11, 43 |
| FaqI | GGGAC | 1 cut(s) | 113 |
| FatI | CATG | 1 cut(s) | 138 |
| FblI | GTMKAC | 2 cut(s) | 8, 23 |
| Fnu4HI | GCNGC | 1 cut(s) | 125 |
| Fsp4HI | GCNGC | 1 cut(s) | 125 |
| GluI | GCNGC | 1 cut(s) | 125 |
| HaeIII | GGCC | 1 cut(s) | 89 |
| Hin1II | CATG | 1 cut(s) | 142 |
| HincII | GTYRAC | 1 cut(s) | 9 |
| HindII | GTYRAC | 1 cut(s) | 9 |
| Hpy166II | GTNNAC | 2 cut(s) | 9, 24 |
| Hpy188I | TCNGA | 1 cut(s) | 113 |
| Hpy8I | GTNNAC | 2 cut(s) | 9, 24 |
| HpyCH4V | TGCA | 3 cut(s) | 44, 65, 127 |
| HpyF3I | CTNAG | 1 cut(s) | 110 |
| Hsp92II | CATG | 1 cut(s) | 142 |
| Kzo9I | GATC | 2 cut(s) | 70, 113 |
| LpnPI | CCDG | 3 cut(s) | 28, 62, 116 |
| Lsp1109I | GCAGC | 1 cut(s) | 111 |
| MalI | GATC | 2 cut(s) | 72, 115 |
| MboI | GATC | 2 cut(s) | 70, 113 |
| MflI | RGATCY | 1 cut(s) | 113 |
| MluCI | AATT | 2 cut(s) | 74, 129 |
| MspR9I | CCNGG | 1 cut(s) | 16 |
| MvaI | CCWGG | 1 cut(s) | 16 |
| NdeII | GATC | 2 cut(s) | 70, 113 |
| NlaIII | CATG | 1 cut(s) | 142 |
| NlaIV | GGNNCC | 1 cut(s) | 101 |
| PkrI | GCNGC | 1 cut(s) | 126 |
| PpuMI | RGGWCCY | 1 cut(s) | 100 |
| Psp5II | RGGWCCY | 1 cut(s) | 100 |
| Psp6I | CCWGG | 1 cut(s) | 14 |
| PspGI | CCWGG | 1 cut(s) | 14 |
| PspN4I | GGNNCC | 1 cut(s) | 101 |
| PspPI | GGNCC | 2 cut(s) | 87, 100 |
| PspPPI | RGGWCCY | 1 cut(s) | 100 |
| PsuI | RGATCY | 1 cut(s) | 113 |
| SalI | GTCGAC | 1 cut(s) | 7 |
| SatI | GCNGC | 1 cut(s) | 125 |
| Sau3AI | GATC | 2 cut(s) | 70, 113 |
| Sau96I | GGNCC | 2 cut(s) | 87, 100 |
| ScrFI | CCNGG | 1 cut(s) | 16 |
| SetI | ASST | 3 cut(s) | 29, 54, 105 |
| SgeI | CNNG | 7 cut(s) | 27, 28, 40, 61, 68, 103, 115 |
| SinI | GGWCC | 1 cut(s) | 100 |
| Sse9I | AATT | 2 cut(s) | 74, 129 |
| StyD4I | CCNGG | 1 cut(s) | 14 |
| StyI | CCWWGG | 1 cut(s) | 27 |
| TaqI | TCGA | 2 cut(s) | 8, 57 |
| TasI | AATT | 2 cut(s) | 74, 129 |
| TseI | GCWGC | 1 cut(s) | 124 |
| VpaK11BI | GGWCC | 1 cut(s) | 100 |
| XmiI | GTMKAC | 2 cut(s) | 8, 23 |