HECT-like Ubiquitin-conjugating enzyme (E2)-binding
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0390451 |
| rosa_roxburghii | Rroxscaffold_3G00238280 |
| rosa_samantha | Rh2CG431300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 14 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 87 |
| AgsI | TTSAA | 2 cut(s) | 97, 164 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 34 |
| AluBI | AGCT | 1 cut(s) | 200 |
| AluI | AGCT | 1 cut(s) | 200 |
| AoxI | GGCC | 1 cut(s) | 78 |
| ApeKI | GCWGC | 1 cut(s) | 200 |
| AspLEI | GCGC | 1 cut(s) | 116 |
| AspS9I | GGNCC | 1 cut(s) | 78 |
| BbvI | GCAGC | 1 cut(s) | 187 |
| BceAI | ACGGC | 1 cut(s) | 65 |
| BglII | AGATCT | 1 cut(s) | 104 |
| BisI | GCNGC | 1 cut(s) | 201 |
| BlsI | GCNGC | 1 cut(s) | 202 |
| BmgT120I | GGNCC | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 3 cut(s) | 18, 81, 144 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 14, 44 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 87 |
| Bse118I | RCCGGY | 1 cut(s) | 39 |
| BseDI | CCNNGG | 3 cut(s) | 18, 81, 144 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 87 |
| BseMII | CTCAG | 2 cut(s) | 115, 122 |
| BseXI | GCAGC | 1 cut(s) | 187 |
| BshFI | GGCC | 1 cut(s) | 80 |
| BsiSI | CCGG | 1 cut(s) | 40 |
| BslFI | GGGAC | 1 cut(s) | 104 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 87 |
| BsmFI | GGGAC | 1 cut(s) | 104 |
| BsnI | GGCC | 1 cut(s) | 80 |
| Bsp143I | GATC | 2 cut(s) | 61, 104 |
| BspANI | GGCC | 1 cut(s) | 80 |
| BspCNI | CTCAG | 2 cut(s) | 114, 121 |
| BsrFI | RCCGGY | 1 cut(s) | 39 |
| BssAI | RCCGGY | 1 cut(s) | 39 |
| BssECI | CCNNGG | 3 cut(s) | 18, 81, 144 |
| BssMI | GATC | 2 cut(s) | 61, 104 |
| BssNAI | GTATAC | 1 cut(s) | 15 |
| BssT1I | CCWWGG | 2 cut(s) | 18, 144 |
| Bst1107I | GTATAC | 1 cut(s) | 15 |
| BstDEI | CTNAG | 2 cut(s) | 101, 108 |
| BstDSI | CCRYGG | 1 cut(s) | 81 |
| BstHHI | GCGC | 1 cut(s) | 116 |
| BstKTI | GATC | 2 cut(s) | 64, 107 |
| BstMBI | GATC | 2 cut(s) | 61, 104 |
| BstV1I | GCAGC | 1 cut(s) | 187 |
| BstX2I | RGATCY | 1 cut(s) | 104 |
| BstYI | RGATCY | 1 cut(s) | 104 |
| BstZ17I | GTATAC | 1 cut(s) | 15 |
| BsuRI | GGCC | 1 cut(s) | 80 |
| BtgI | CCRYGG | 1 cut(s) | 81 |
| BtsIMutI | CAGTG | 1 cut(s) | 116 |
| CfoI | GCGC | 1 cut(s) | 116 |
| Cfr10I | RCCGGY | 1 cut(s) | 39 |
| Cfr13I | GGNCC | 1 cut(s) | 78 |
| CviJI | RGCY | 5 cut(s) | 43, 80, 143, 192, 200 |
| CviKI_1 | RGCY | 5 cut(s) | 43, 80, 143, 192, 200 |
| DdeI | CTNAG | 2 cut(s) | 101, 108 |
| DpnI | GATC | 2 cut(s) | 63, 106 |
| DpnII | GATC | 2 cut(s) | 61, 104 |
| Eco130I | CCWWGG | 2 cut(s) | 18, 144 |
| EcoT14I | CCWWGG | 2 cut(s) | 18, 144 |
| ErhI | CCWWGG | 2 cut(s) | 18, 144 |
| FaiI | YATR | 1 cut(s) | 15 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 34 |
| FaqI | GGGAC | 1 cut(s) | 104 |
| FblI | GTMKAC | 1 cut(s) | 14 |
| Fnu4HI | GCNGC | 1 cut(s) | 201 |
| Fsp4HI | GCNGC | 1 cut(s) | 201 |
| GlaI | GCGC | 1 cut(s) | 115 |
| GluI | GCNGC | 1 cut(s) | 201 |
| HaeIII | GGCC | 1 cut(s) | 80 |
| HapII | CCGG | 1 cut(s) | 40 |
| HhaI | GCGC | 1 cut(s) | 116 |
| Hin6I | GCGC | 1 cut(s) | 114 |
| HinP1I | GCGC | 1 cut(s) | 114 |
| HpaII | CCGG | 1 cut(s) | 40 |
| Hpy166II | GTNNAC | 2 cut(s) | 15, 175 |
| Hpy188I | TCNGA | 1 cut(s) | 104 |
| Hpy8I | GTNNAC | 2 cut(s) | 15, 175 |
| HpyCH4V | TGCA | 2 cut(s) | 35, 56 |
| HpyF3I | CTNAG | 2 cut(s) | 101, 108 |
| HspAI | GCGC | 1 cut(s) | 114 |
| Kzo9I | GATC | 2 cut(s) | 61, 104 |
| LpnPI | CCDG | 1 cut(s) | 53 |
| Lsp1109I | GCAGC | 1 cut(s) | 187 |
| MaeIII | GTNAC | 1 cut(s) | 148 |
| MalI | GATC | 2 cut(s) | 63, 106 |
| MboI | GATC | 2 cut(s) | 61, 104 |
| MboII | GAAGA | 1 cut(s) | 176 |
| MflI | RGATCY | 1 cut(s) | 104 |
| MluCI | AATT | 1 cut(s) | 65 |
| MmeI | TCCRAC | 1 cut(s) | 112 |
| MnlI | CCTC | 1 cut(s) | 128 |
| MspI | CCGG | 1 cut(s) | 40 |
| NdeII | GATC | 2 cut(s) | 61, 104 |
| PkrI | GCNGC | 1 cut(s) | 202 |
| PspPI | GGNCC | 1 cut(s) | 78 |
| PsuI | RGATCY | 1 cut(s) | 104 |
| SatI | GCNGC | 1 cut(s) | 201 |
| Sau3AI | GATC | 2 cut(s) | 61, 104 |
| Sau96I | GGNCC | 1 cut(s) | 78 |
| SetI | ASST | 2 cut(s) | 20, 202 |
| Sse9I | AATT | 1 cut(s) | 65 |
| StyI | CCWWGG | 2 cut(s) | 18, 144 |
| TaqI | TCGA | 1 cut(s) | 48 |
| TasI | AATT | 1 cut(s) | 65 |
| TscAI | CASTG | 1 cut(s) | 116 |
| TseI | GCWGC | 1 cut(s) | 200 |
| TspRI | CASTG | 1 cut(s) | 116 |
| XmiI | GTMKAC | 1 cut(s) | 14 |