RchiOBHm_Chr5g0049301
NAC Family

inactive protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
46835846 .. 46836535
690 bp
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UTR
Exon/CDS
Intron
PRQ32697

Sequence Viewer

Length: 228 bp
ATGAGTCGAGAACAGAAGAGGGTGAAGCAGGAGAAAGGATCGAATGACGCCGAGAAGGTGGTGGTTGCGGTTAAGGCGTCCAAGGAAATTCCCAAGGCTGCTCTGGTGTGGGCATTGACTCATGTCGTTCAACATGGAGATTGCATTACACTGCTTGTAGTTGTCCCATCTCAAAGTTCAGGTATTTTCACTATGCTGTTGATTTATGCCTATTTTCACGTTCAGTGA

Protein Analysis

75

Amino Acids

8.32

Weight (kDa)

9.25

Isoelectric Point (pI)

44.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0021323)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 68
AclWI GGATC 1 cut(s) 46
AcsI RAATTY 1 cut(s) 87
AcyI GRCGYC 2 cut(s) 48, 77
AgsI TTSAA 1 cut(s) 131
AlwI GGATC 1 cut(s) 46
ApeKI GCWGC 1 cut(s) 98
ApoI RAATTY 1 cut(s) 87
AsuHPI GGTGA 1 cut(s) 34
BbvI GCAGC 1 cut(s) 85
BccI CCATC 1 cut(s) 175
BisI GCNGC 1 cut(s) 99
BlsI GCNGC 1 cut(s) 100
BoxI GACNNNNGTC 1 cut(s) 122
BsaHI GRCGYC 2 cut(s) 48, 77
BsaJI CCNNGG 2 cut(s) 81, 93
BseDI CCNNGG 2 cut(s) 81, 93
BseXI GCAGC 1 cut(s) 85
BslFI GGGAC 1 cut(s) 149
BsmFI GGGAC 1 cut(s) 149
Bsp143I GATC 1 cut(s) 38
BspACI CCGC 1 cut(s) 68
BspPI GGATC 1 cut(s) 46
BssECI CCNNGG 2 cut(s) 81, 93
BssMI GATC 1 cut(s) 38
BssNI GRCGYC 2 cut(s) 48, 77
BssT1I CCWWGG 2 cut(s) 81, 93
Bst6I CTCTTC 1 cut(s) 11
BstACI GRCGYC 2 cut(s) 48, 77
BstKTI GATC 1 cut(s) 41
BstMBI GATC 1 cut(s) 38
BstMWI GCNNNNNNNGC 1 cut(s) 74
BstPAI GACNNNNGTC 1 cut(s) 122
BstV1I GCAGC 1 cut(s) 85
BtsI GCAGTG 1 cut(s) 149
BtsIMutI CAGTG 1 cut(s) 149
CseI GACGC 2 cut(s) 56, 66
CviAII CATG 2 cut(s) 122, 134
CviJI RGCY 1 cut(s) 98
CviKI_1 RGCY 1 cut(s) 98
DpnI GATC 1 cut(s) 40
DpnII GATC 1 cut(s) 38
Eam1104I CTCTTC 1 cut(s) 11
EarI CTCTTC 1 cut(s) 11
Eco130I CCWWGG 2 cut(s) 81, 93
EcoT14I CCWWGG 2 cut(s) 81, 93
ErhI CCWWGG 2 cut(s) 81, 93
FaeI CATG 2 cut(s) 125, 137
FaiI YATR 4 cut(s) 123, 135, 194, 207
FaqI GGGAC 1 cut(s) 149
FatI CATG 2 cut(s) 121, 133
Fnu4HI GCNGC 1 cut(s) 99
Fsp4HI GCNGC 1 cut(s) 99
GluI GCNGC 1 cut(s) 99
HgaI GACGC 2 cut(s) 56, 66
Hin1I GRCGYC 2 cut(s) 48, 77
Hin1II CATG 2 cut(s) 125, 137
HinfI GANTC 2 cut(s) 4, 118
HphI GGTGA 1 cut(s) 34
Hpy188III TCNNGA 1 cut(s) 8
HpyAV CCTTC 1 cut(s) 49
HpyCH4IV ACGT 1 cut(s) 219
HpyCH4V TGCA 1 cut(s) 144
HpyF10VI GCNNNNNNNGC 1 cut(s) 74
HpySE526I ACGT 1 cut(s) 219
Hsp92I GRCGYC 2 cut(s) 48, 77
Hsp92II CATG 2 cut(s) 125, 137
Kzo9I GATC 1 cut(s) 38
LpnPI CCDG 3 cut(s) 14, 89, 165
Lsp1109I GCAGC 1 cut(s) 85
MaeII ACGT 1 cut(s) 219
MalI GATC 1 cut(s) 40
MboI GATC 1 cut(s) 38
MboII GAAGA 1 cut(s) 28
MluCI AATT 1 cut(s) 87
MlyI GAGTC 2 cut(s) 13, 112
MnlI CCTC 1 cut(s) 12
MseI TTAA 1 cut(s) 72
MwoI GCNNNNNNNGC 1 cut(s) 74
NdeII GATC 1 cut(s) 38
NlaIII CATG 2 cut(s) 125, 137
NmeAIII GCCGAG 1 cut(s) 76
PkrI GCNGC 1 cut(s) 100
PleI GAGTC 2 cut(s) 12, 112
PpsI GAGTC 2 cut(s) 12, 112
PshAI GACNNNNGTC 1 cut(s) 122
SaqAI TTAA 1 cut(s) 72
SatI GCNGC 1 cut(s) 99
Sau3AI GATC 1 cut(s) 38
SchI GAGTC 2 cut(s) 13, 112
SetI ASST 3 cut(s) 60, 184, 222
Sse9I AATT 1 cut(s) 87
SsiI CCGC 1 cut(s) 68
StyI CCWWGG 2 cut(s) 81, 93
TaiI ACGT 1 cut(s) 222
TaqI TCGA 2 cut(s) 7, 41
TasI AATT 1 cut(s) 87
Tru1I TTAA 1 cut(s) 72
Tru9I TTAA 1 cut(s) 72
TscAI CASTG 1 cut(s) 156
TseI GCWGC 1 cut(s) 98
TspRI CASTG 1 cut(s) 156
XapI RAATTY 1 cut(s) 87
XcmI CCANNNNNNNNNTGG 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.