E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0244951 |
| rosa_samantha | Rh6CG020500 |
| rosa_wichuraiana | Rw6G002250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 182 |
| AfaI | GTAC | 1 cut(s) | 194 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 182 |
| AgsI | TTSAA | 2 cut(s) | 29, 90 |
| Alw26I | GTCTC | 1 cut(s) | 141 |
| ApeKI | GCWGC | 2 cut(s) | 71, 74 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 100 |
| AspLEI | GCGC | 1 cut(s) | 170 |
| BbvI | GCAGC | 2 cut(s) | 58, 61 |
| BcoDI | GTCTC | 1 cut(s) | 141 |
| BisI | GCNGC | 2 cut(s) | 72, 75 |
| BlsI | GCNGC | 2 cut(s) | 73, 76 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 182 |
| Bse1I | ACTGG | 1 cut(s) | 155 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 182 |
| BseNI | ACTGG | 1 cut(s) | 155 |
| BseXI | GCAGC | 2 cut(s) | 58, 61 |
| Bsh1285I | CGRYCG | 1 cut(s) | 248 |
| BsiEI | CGRYCG | 1 cut(s) | 248 |
| BslFI | GGGAC | 1 cut(s) | 199 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 182 |
| BsmAI | GTCTC | 1 cut(s) | 141 |
| BsmFI | GGGAC | 1 cut(s) | 199 |
| Bsp143I | GATC | 1 cut(s) | 245 |
| BsrI | ACTGG | 1 cut(s) | 155 |
| BssMI | GATC | 1 cut(s) | 245 |
| BstC8I | GCNNGC | 1 cut(s) | 79 |
| BstHHI | GCGC | 1 cut(s) | 170 |
| BstKTI | GATC | 1 cut(s) | 248 |
| BstMAI | GTCTC | 1 cut(s) | 141 |
| BstMBI | GATC | 1 cut(s) | 245 |
| BstMCI | CGRYCG | 1 cut(s) | 248 |
| BstV1I | GCAGC | 2 cut(s) | 58, 61 |
| Cac8I | GCNNGC | 1 cut(s) | 79 |
| CfoI | GCGC | 1 cut(s) | 170 |
| Csp6I | GTAC | 1 cut(s) | 193 |
| CviJI | RGCY | 2 cut(s) | 71, 224 |
| CviKI_1 | RGCY | 2 cut(s) | 71, 224 |
| CviQI | GTAC | 1 cut(s) | 193 |
| DpnI | GATC | 1 cut(s) | 247 |
| DpnII | GATC | 1 cut(s) | 245 |
| FaiI | YATR | 3 cut(s) | 48, 164, 166 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 88, 120 |
| FaqI | GGGAC | 1 cut(s) | 199 |
| FauNDI | CATATG | 1 cut(s) | 164 |
| Fnu4HI | GCNGC | 2 cut(s) | 72, 75 |
| Fsp4HI | GCNGC | 2 cut(s) | 72, 75 |
| GlaI | GCGC | 1 cut(s) | 169 |
| GluI | GCNGC | 2 cut(s) | 72, 75 |
| HhaI | GCGC | 1 cut(s) | 170 |
| Hin6I | GCGC | 1 cut(s) | 168 |
| HinP1I | GCGC | 1 cut(s) | 168 |
| Hpy188III | TCNNGA | 2 cut(s) | 26, 249 |
| HpyAV | CCTTC | 1 cut(s) | 90 |
| HpyCH4V | TGCA | 2 cut(s) | 111, 229 |
| HspAI | GCGC | 1 cut(s) | 168 |
| Kzo9I | GATC | 1 cut(s) | 245 |
| LpnPI | CCDG | 3 cut(s) | 91, 121, 136 |
| Lsp1109I | GCAGC | 2 cut(s) | 58, 61 |
| MalI | GATC | 1 cut(s) | 247 |
| MboI | GATC | 1 cut(s) | 245 |
| MboII | GAAGA | 2 cut(s) | 41, 96 |
| MluCI | AATT | 1 cut(s) | 112 |
| MnlI | CCTC | 2 cut(s) | 181, 214 |
| MroXI | GAANNNNTTC | 1 cut(s) | 100 |
| MslI | CAYNNNNRTG | 1 cut(s) | 90 |
| NdeI | CATATG | 1 cut(s) | 164 |
| NdeII | GATC | 1 cut(s) | 245 |
| PdmI | GAANNNNTTC | 1 cut(s) | 100 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 182 |
| PkrI | GCNGC | 2 cut(s) | 73, 76 |
| Ple19I | CGATCG | 1 cut(s) | 248 |
| PvuI | CGATCG | 1 cut(s) | 248 |
| RsaI | GTAC | 1 cut(s) | 194 |
| RsaNI | GTAC | 1 cut(s) | 193 |
| RseI | CAYNNNNRTG | 1 cut(s) | 90 |
| SatI | GCNGC | 2 cut(s) | 72, 75 |
| Sau3AI | GATC | 1 cut(s) | 245 |
| SetI | ASST | 2 cut(s) | 66, 133 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 90 |
| Sse9I | AATT | 1 cut(s) | 112 |
| SspI | AATATT | 1 cut(s) | 22 |
| TasI | AATT | 1 cut(s) | 112 |
| TseI | GCWGC | 2 cut(s) | 71, 74 |
| TspDTI | ATGAA | 1 cut(s) | 151 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 182 |
| XmnI | GAANNNNTTC | 1 cut(s) | 100 |