E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0244951 |
| rosa_samantha | Rh6CG020500 |
| rosa_wichuraiana | Rw6G002250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 215 |
| AciI | CCGC | 1 cut(s) | 201 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 215 |
| AgsI | TTSAA | 1 cut(s) | 123 |
| AluBI | AGCT | 2 cut(s) | 11, 36 |
| AluI | AGCT | 2 cut(s) | 11, 36 |
| Alw26I | GTCTC | 1 cut(s) | 174 |
| ApeKI | GCWGC | 2 cut(s) | 104, 107 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 133 |
| AsuHPI | GGTGA | 1 cut(s) | 199 |
| BbvI | GCAGC | 2 cut(s) | 91, 94 |
| BccI | CCATC | 1 cut(s) | 67 |
| BcoDI | GTCTC | 1 cut(s) | 174 |
| BfaI | CTAG | 1 cut(s) | 33 |
| BisI | GCNGC | 3 cut(s) | 105, 108, 202 |
| BlsI | GCNGC | 3 cut(s) | 106, 109, 203 |
| BmrI | ACTGGG | 1 cut(s) | 193 |
| BmuI | ACTGGG | 1 cut(s) | 193 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 215 |
| Bse1I | ACTGG | 2 cut(s) | 42, 188 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 215 |
| BseNI | ACTGG | 2 cut(s) | 42, 188 |
| BseXI | GCAGC | 2 cut(s) | 91, 94 |
| Bsh1285I | CGRYCG | 1 cut(s) | 281 |
| BsiEI | CGRYCG | 1 cut(s) | 281 |
| BslFI | GGGAC | 1 cut(s) | 232 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 215 |
| BsmAI | GTCTC | 1 cut(s) | 174 |
| BsmFI | GGGAC | 1 cut(s) | 232 |
| Bsp143I | GATC | 1 cut(s) | 278 |
| BspACI | CCGC | 1 cut(s) | 201 |
| BsrI | ACTGG | 2 cut(s) | 42, 188 |
| BssMI | GATC | 1 cut(s) | 278 |
| BstC8I | GCNNGC | 1 cut(s) | 112 |
| BstKTI | GATC | 1 cut(s) | 281 |
| BstMAI | GTCTC | 1 cut(s) | 174 |
| BstMBI | GATC | 1 cut(s) | 278 |
| BstMCI | CGRYCG | 1 cut(s) | 281 |
| BstV1I | GCAGC | 2 cut(s) | 91, 94 |
| BtsIMutI | CAGTG | 1 cut(s) | 49 |
| Cac8I | GCNNGC | 1 cut(s) | 112 |
| CviJI | RGCY | 5 cut(s) | 11, 36, 104, 204, 257 |
| CviKI_1 | RGCY | 5 cut(s) | 11, 36, 104, 204, 257 |
| DpnI | GATC | 1 cut(s) | 280 |
| DpnII | GATC | 1 cut(s) | 278 |
| FaiI | YATR | 3 cut(s) | 81, 197, 199 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 121, 153 |
| FaqI | GGGAC | 1 cut(s) | 232 |
| FauNDI | CATATG | 1 cut(s) | 197 |
| Fnu4HI | GCNGC | 3 cut(s) | 105, 108, 202 |
| Fsp4HI | GCNGC | 3 cut(s) | 105, 108, 202 |
| FspBI | CTAG | 1 cut(s) | 33 |
| GluI | GCNGC | 3 cut(s) | 105, 108, 202 |
| HindIII | AAGCTT | 1 cut(s) | 9 |
| HphI | GGTGA | 1 cut(s) | 199 |
| Hpy188I | TCNGA | 1 cut(s) | 72 |
| Hpy188III | TCNNGA | 1 cut(s) | 282 |
| HpyAV | CCTTC | 2 cut(s) | 63, 123 |
| HpyCH4V | TGCA | 2 cut(s) | 144, 262 |
| Kzo9I | GATC | 1 cut(s) | 278 |
| LpnPI | CCDG | 4 cut(s) | 55, 124, 154, 169 |
| Lsp1109I | GCAGC | 2 cut(s) | 91, 94 |
| MaeI | CTAG | 1 cut(s) | 33 |
| MalI | GATC | 1 cut(s) | 280 |
| MboI | GATC | 1 cut(s) | 278 |
| MboII | GAAGA | 1 cut(s) | 129 |
| MluCI | AATT | 1 cut(s) | 145 |
| MnlI | CCTC | 2 cut(s) | 81, 247 |
| MroXI | GAANNNNTTC | 1 cut(s) | 133 |
| MslI | CAYNNNNRTG | 1 cut(s) | 123 |
| NdeI | CATATG | 1 cut(s) | 197 |
| NdeII | GATC | 1 cut(s) | 278 |
| PdmI | GAANNNNTTC | 1 cut(s) | 133 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 215 |
| PkrI | GCNGC | 3 cut(s) | 106, 109, 203 |
| Ple19I | CGATCG | 1 cut(s) | 281 |
| PvuI | CGATCG | 1 cut(s) | 281 |
| RseI | CAYNNNNRTG | 1 cut(s) | 123 |
| SatI | GCNGC | 3 cut(s) | 105, 108, 202 |
| Sau3AI | GATC | 1 cut(s) | 278 |
| SetI | ASST | 5 cut(s) | 13, 34, 38, 55, 99 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 123 |
| Sse9I | AATT | 1 cut(s) | 145 |
| SsiI | CCGC | 1 cut(s) | 201 |
| SspMI | CTAG | 1 cut(s) | 33 |
| TasI | AATT | 1 cut(s) | 145 |
| TauI | GCSGC | 1 cut(s) | 204 |
| TscAI | CASTG | 1 cut(s) | 49 |
| TseI | GCWGC | 2 cut(s) | 104, 107 |
| TspDTI | ATGAA | 2 cut(s) | 36, 184 |
| TspRI | CASTG | 1 cut(s) | 49 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 215 |
| XmnI | GAANNNNTTC | 1 cut(s) | 133 |
| XspI | CTAG | 1 cut(s) | 33 |