TENA/THI-4/PQQC family
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0254991 RchiOBHm_Chr7g0224921 |
| rosa_roxburghii | Rroxscaffold_3G00250100 |
| rosa_samantha | Rh4CG415900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 23, 25 |
| AciI | CCGC | 1 cut(s) | 25 |
| AclWI | GGATC | 1 cut(s) | 44 |
| AflIII | ACRYGT | 1 cut(s) | 117 |
| AgsI | TTSAA | 1 cut(s) | 46 |
| Alw26I | GTCTC | 1 cut(s) | 110 |
| AlwI | GGATC | 1 cut(s) | 44 |
| AoxI | GGCC | 2 cut(s) | 16, 88 |
| AspLEI | GCGC | 1 cut(s) | 25 |
| AsuHPI | GGTGA | 2 cut(s) | 91, 143 |
| BbsI | GAAGAC | 1 cut(s) | 52 |
| BcoDI | GTCTC | 1 cut(s) | 110 |
| BmsI | GCATC | 1 cut(s) | 176 |
| BpiI | GAAGAC | 1 cut(s) | 52 |
| BsaAI | YACGTR | 1 cut(s) | 244 |
| BsaJI | CCNNGG | 1 cut(s) | 127 |
| Bse1I | ACTGG | 1 cut(s) | 102 |
| BseDI | CCNNGG | 1 cut(s) | 127 |
| BseGI | GGATG | 2 cut(s) | 55, 191 |
| BseNI | ACTGG | 1 cut(s) | 102 |
| BseYI | CCCAGC | 1 cut(s) | 155 |
| Bsh1236I | CGCG | 2 cut(s) | 23, 25 |
| BshFI | GGCC | 2 cut(s) | 18, 90 |
| BsmAI | GTCTC | 1 cut(s) | 110 |
| BsnI | GGCC | 2 cut(s) | 18, 90 |
| Bsp143I | GATC | 1 cut(s) | 36 |
| Bsp19I | CCATGG | 1 cut(s) | 127 |
| BspACI | CCGC | 1 cut(s) | 25 |
| BspANI | GGCC | 2 cut(s) | 18, 90 |
| BspFNI | CGCG | 2 cut(s) | 23, 25 |
| BspPI | GGATC | 1 cut(s) | 44 |
| BsrI | ACTGG | 1 cut(s) | 102 |
| BssECI | CCNNGG | 1 cut(s) | 127 |
| BssMI | GATC | 1 cut(s) | 36 |
| BssT1I | CCWWGG | 1 cut(s) | 127 |
| BstBAI | YACGTR | 1 cut(s) | 244 |
| BstC8I | GCNNGC | 2 cut(s) | 16, 172 |
| BstDSI | CCRYGG | 1 cut(s) | 127 |
| BstF5I | GGATG | 2 cut(s) | 55, 191 |
| BstFNI | CGCG | 2 cut(s) | 23, 25 |
| BstHHI | GCGC | 1 cut(s) | 25 |
| BstKTI | GATC | 1 cut(s) | 39 |
| BstMAI | GTCTC | 1 cut(s) | 110 |
| BstMBI | GATC | 1 cut(s) | 36 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 20 |
| BstNSI | RCATGY | 1 cut(s) | 121 |
| BstUI | CGCG | 2 cut(s) | 23, 25 |
| BstV2I | GAAGAC | 1 cut(s) | 52 |
| BsuRI | GGCC | 2 cut(s) | 18, 90 |
| BtgI | CCRYGG | 1 cut(s) | 127 |
| BtsCI | GGATG | 2 cut(s) | 55, 191 |
| Cac8I | GCNNGC | 2 cut(s) | 16, 172 |
| CfoI | GCGC | 1 cut(s) | 25 |
| CviAII | CATG | 2 cut(s) | 118, 128 |
| CviJI | RGCY | 4 cut(s) | 18, 31, 90, 155 |
| CviKI_1 | RGCY | 4 cut(s) | 18, 31, 90, 155 |
| DpnI | GATC | 1 cut(s) | 38 |
| DpnII | GATC | 1 cut(s) | 36 |
| Eco130I | CCWWGG | 1 cut(s) | 127 |
| Eco147I | AGGCCT | 1 cut(s) | 18 |
| EcoT14I | CCWWGG | 1 cut(s) | 127 |
| ErhI | CCWWGG | 1 cut(s) | 127 |
| FaeI | CATG | 2 cut(s) | 121, 131 |
| FaiI | YATR | 6 cut(s) | 119, 129, 139, 167, 180, 241 |
| FatI | CATG | 2 cut(s) | 117, 127 |
| FokI | GGATG | 2 cut(s) | 62, 198 |
| GlaI | GCGC | 1 cut(s) | 24 |
| GsaI | CCCAGC | 1 cut(s) | 159 |
| HaeIII | GGCC | 2 cut(s) | 18, 90 |
| HhaI | GCGC | 1 cut(s) | 25 |
| Hin1II | CATG | 2 cut(s) | 121, 131 |
| Hin6I | GCGC | 1 cut(s) | 23 |
| HinP1I | GCGC | 1 cut(s) | 23 |
| HinfI | GANTC | 2 cut(s) | 53, 110 |
| HphI | GGTGA | 2 cut(s) | 91, 143 |
| Hpy166II | GTNNAC | 1 cut(s) | 7 |
| Hpy188III | TCNNGA | 1 cut(s) | 107 |
| Hpy8I | GTNNAC | 1 cut(s) | 7 |
| Hpy99I | CGWCG | 1 cut(s) | 220 |
| HpyAV | CCTTC | 3 cut(s) | 88, 106, 198 |
| HpyCH4IV | ACGT | 1 cut(s) | 243 |
| HpyCH4V | TGCA | 3 cut(s) | 174, 189, 212 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 20 |
| HpySE526I | ACGT | 1 cut(s) | 243 |
| Hsp92II | CATG | 2 cut(s) | 121, 131 |
| HspAI | GCGC | 1 cut(s) | 23 |
| Kzo9I | GATC | 1 cut(s) | 36 |
| LpnPI | CCDG | 2 cut(s) | 115, 141 |
| LweI | GCATC | 1 cut(s) | 176 |
| MaeII | ACGT | 1 cut(s) | 243 |
| MalI | GATC | 1 cut(s) | 38 |
| MboI | GATC | 1 cut(s) | 36 |
| MboII | GAAGA | 1 cut(s) | 52 |
| MluCI | AATT | 1 cut(s) | 196 |
| MlyI | GAGTC | 1 cut(s) | 104 |
| MmeI | TCCRAC | 1 cut(s) | 123 |
| MnlI | CCTC | 3 cut(s) | 29, 134, 176 |
| MvnI | CGCG | 2 cut(s) | 23, 25 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 20 |
| NcoI | CCATGG | 1 cut(s) | 127 |
| NdeII | GATC | 1 cut(s) | 36 |
| NlaIII | CATG | 2 cut(s) | 121, 131 |
| NspI | RCATGY | 1 cut(s) | 121 |
| PceI | AGGCCT | 1 cut(s) | 18 |
| PciI | ACATGT | 1 cut(s) | 117 |
| PfeI | GAWTC | 1 cut(s) | 53 |
| PflFI | GACNNNGTC | 1 cut(s) | 232 |
| PleI | GAGTC | 1 cut(s) | 104 |
| PpsI | GAGTC | 1 cut(s) | 104 |
| Ppu21I | YACGTR | 1 cut(s) | 244 |
| PscI | ACATGT | 1 cut(s) | 117 |
| PspFI | CCCAGC | 1 cut(s) | 155 |
| PsyI | GACNNNGTC | 1 cut(s) | 232 |
| Sau3AI | GATC | 1 cut(s) | 36 |
| SchI | GAGTC | 1 cut(s) | 104 |
| SetI | ASST | 1 cut(s) | 246 |
| SfaNI | GCATC | 1 cut(s) | 176 |
| Sse9I | AATT | 1 cut(s) | 196 |
| SseBI | AGGCCT | 1 cut(s) | 18 |
| SsiI | CCGC | 1 cut(s) | 25 |
| StuI | AGGCCT | 1 cut(s) | 18 |
| StyI | CCWWGG | 1 cut(s) | 127 |
| TaiI | ACGT | 1 cut(s) | 246 |
| TaqI | TCGA | 2 cut(s) | 108, 202 |
| TasI | AATT | 1 cut(s) | 196 |
| TfiI | GAWTC | 1 cut(s) | 53 |
| Tth111I | GACNNNGTC | 1 cut(s) | 232 |
| XceI | RCATGY | 1 cut(s) | 121 |