RchiOBHm_Chr6g0256191

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
11503092 .. 11503723
632 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22980

Sequence Viewer

Length: 348 bp
ATGAAGGAGAAGTTCTTTAAAGCTACCACTCTGCTTCAACCACAAATTGAGAAAATTCCGGACCAACATCGACCTCACTGCCTTGTTACAGATACTTTCTTTGCTTGGGCTACTGATGTTGCTGCCAAGTTAGATCATTACAGGAATATTTTTGGAAGGGAAGCGTGGCATATTGGCCCAGTTTCCTTGTTCAACAAGGCAGCAGTTGATGAAGAAAATGACTGCTTCAATTGGCTAAATTCTAAGAAACCCAGTTCAGTCATTTACATATGTTTTGGCAGCATGACCAATTTCAGTGATTCTCAGCTTCTAGAAATTGCAGTAGGGCTTGAGGCTAGTGGGTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

115

Amino Acids

13.04

Weight (kDa)

5.73

Isoelectric Point (pI)

39.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022802)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0256191 RchiOBHm_Chr6g0256291
rosa_multiflora Rmu_sc0001598.1_g000002
rosa_roxburghii Rroxscaffold_7G00209370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 58
AcsI RAATTY 2 cut(s) 54, 238
AgsI TTSAA 3 cut(s) 38, 193, 229
AluBI AGCT 2 cut(s) 23, 307
AluI AGCT 2 cut(s) 23, 307
Aor13HI TCCGGA 1 cut(s) 58
AoxI GGCC 1 cut(s) 175
ApeKI GCWGC 3 cut(s) 122, 200, 279
ApoI RAATTY 2 cut(s) 54, 238
AspS9I GGNCC 2 cut(s) 61, 176
AvaII GGWCC 1 cut(s) 61
BbvI GCAGC 3 cut(s) 109, 212, 291
BcgI CGANNNNNNTGC 2 cut(s) 60, 94
BfaI CTAG 2 cut(s) 311, 336
BisI GCNGC 3 cut(s) 123, 201, 280
BlsI GCNGC 3 cut(s) 124, 202, 281
Bme18I GGWCC 1 cut(s) 61
BmgT120I GGNCC 2 cut(s) 61, 176
BmrI ACTGGG 2 cut(s) 173, 246
BmuI ACTGGG 2 cut(s) 173, 246
BsaWI WCCGGW 1 cut(s) 58
Bse1I ACTGG 2 cut(s) 179, 252
BseAI TCCGGA 1 cut(s) 58
BseMII CTCAG 1 cut(s) 317
BseNI ACTGG 2 cut(s) 179, 252
BseXI GCAGC 3 cut(s) 109, 212, 291
BshFI GGCC 1 cut(s) 177
BsiSI CCGG 1 cut(s) 59
BsnI GGCC 1 cut(s) 177
Bsp13I TCCGGA 1 cut(s) 58
Bsp143I GATC 1 cut(s) 133
BspANI GGCC 1 cut(s) 177
BspCNI CTCAG 1 cut(s) 316
BspEI TCCGGA 1 cut(s) 58
BsrI ACTGG 2 cut(s) 179, 252
BssMI GATC 1 cut(s) 133
BstDEI CTNAG 2 cut(s) 243, 303
BstKTI GATC 1 cut(s) 136
BstMBI GATC 1 cut(s) 133
BstV1I GCAGC 3 cut(s) 109, 212, 291
BsuRI GGCC 1 cut(s) 177
BtsI GCAGTG 1 cut(s) 76
BtsIMutI CAGTG 2 cut(s) 76, 301
Cfr13I GGNCC 2 cut(s) 61, 176
CviAII CATG 1 cut(s) 283
CviJI RGCY 7 cut(s) 23, 110, 177, 235, 307, 328, 335
CviKI_1 RGCY 7 cut(s) 23, 110, 177, 235, 307, 328, 335
DdeI CTNAG 2 cut(s) 243, 303
DpnI GATC 1 cut(s) 135
DpnII GATC 1 cut(s) 133
DraI TTTAAA 1 cut(s) 19
Eco47I GGWCC 1 cut(s) 61
FaeI CATG 1 cut(s) 286
FaiI YATR 4 cut(s) 171, 269, 271, 284
FatI CATG 1 cut(s) 282
FauNDI CATATG 1 cut(s) 269
Fnu4HI GCNGC 3 cut(s) 123, 201, 280
Fsp4HI GCNGC 3 cut(s) 123, 201, 280
FspBI CTAG 2 cut(s) 311, 336
GluI GCNGC 3 cut(s) 123, 201, 280
HaeIII GGCC 1 cut(s) 177
HapII CCGG 1 cut(s) 59
Hin1II CATG 1 cut(s) 286
HinfI GANTC 1 cut(s) 299
HpaII CCGG 1 cut(s) 59
Hpy188III TCNNGA 2 cut(s) 59, 311
HpyAV CCTTC 1 cut(s) 150
HpyCH4V TGCA 1 cut(s) 320
HpyF3I CTNAG 2 cut(s) 243, 303
Hsp92II CATG 1 cut(s) 286
Kpn2I TCCGGA 1 cut(s) 58
Kzo9I GATC 1 cut(s) 133
LpnPI CCDG 4 cut(s) 72, 127, 192, 265
Lsp1109I GCAGC 3 cut(s) 109, 212, 291
MaeI CTAG 2 cut(s) 311, 336
MaeIII GTNAC 1 cut(s) 85
MalI GATC 1 cut(s) 135
MboI GATC 1 cut(s) 133
MboII GAAGA 1 cut(s) 224
MfeI CAATTG 1 cut(s) 229
MluCI AATT 6 cut(s) 45, 54, 229, 238, 289, 315
MnlI CCTC 2 cut(s) 84, 325
MroI TCCGGA 1 cut(s) 58
MseI TTAA 1 cut(s) 18
MspI CCGG 1 cut(s) 59
MunI CAATTG 1 cut(s) 229
NdeI CATATG 1 cut(s) 269
NdeII GATC 1 cut(s) 133
NlaIII CATG 1 cut(s) 286
PfeI GAWTC 1 cut(s) 299
PkrI GCNGC 3 cut(s) 124, 202, 281
PspPI GGNCC 2 cut(s) 61, 176
SaqAI TTAA 1 cut(s) 18
SatI GCNGC 3 cut(s) 123, 201, 280
Sau3AI GATC 1 cut(s) 133
Sau96I GGNCC 2 cut(s) 61, 176
SetI ASST 3 cut(s) 25, 76, 309
SinI GGWCC 1 cut(s) 61
SmlI CTYRAG 1 cut(s) 329
SmoI CTYRAG 1 cut(s) 329
Sse9I AATT 6 cut(s) 45, 54, 229, 238, 289, 315
SspI AATATT 1 cut(s) 148
SspMI CTAG 2 cut(s) 311, 336
TaqI TCGA 1 cut(s) 70
TasI AATT 6 cut(s) 45, 54, 229, 238, 289, 315
TfiI GAWTC 1 cut(s) 299
Tru1I TTAA 1 cut(s) 18
Tru9I TTAA 1 cut(s) 18
TscAI CASTG 2 cut(s) 83, 301
TseI GCWGC 3 cut(s) 122, 200, 279
TspDTI ATGAA 2 cut(s) 17, 225
TspRI CASTG 2 cut(s) 83, 301
VpaK11BI GGWCC 1 cut(s) 61
XapI RAATTY 2 cut(s) 54, 238
XbaI TCTAGA 1 cut(s) 310
XspI CTAG 2 cut(s) 311, 336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.