RchiOBHm_Chr6g0265381

GMP synthase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
20964701 .. 20966188
1488 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23801

Sequence Viewer

Length: 183 bp
ATGGAGTTTGTGGTGGAGATGTTCTCAGCTCCGCCCCCGATATCTGAGAAGCAAGAGTATGGAAAGATGGAGATTGTGGTGGAGCGGAATTCAAGGATTTTCGGGTCCAAGAGAGGTTGGGGATTTTCGAAGTCAAAGGTGGAACCCATCTGGTGGAGAGATTTGCGAAGTTTGCTAAAGTAA

Protein Analysis

60

Amino Acids

7.12

Weight (kDa)

9.6

Isoelectric Point (pI)

54.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025103)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0265381 RchiOBHm_Chr7g0217041
rosa_laevigata RLG00000030704

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 153
AccBSI CCGCTC 1 cut(s) 85
AciI CCGC 2 cut(s) 32, 85
AcsI RAATTY 1 cut(s) 88
AfiI CCNNNNNNNGG 1 cut(s) 153
AgsI TTSAA 1 cut(s) 93
AluBI AGCT 1 cut(s) 29
AluI AGCT 1 cut(s) 29
ApoI RAATTY 1 cut(s) 88
AspS9I GGNCC 1 cut(s) 105
AsuII TTCGAA 1 cut(s) 128
AvaII GGWCC 1 cut(s) 105
BccI CCATC 2 cut(s) 61, 155
Bme18I GGWCC 1 cut(s) 105
BmgT120I GGNCC 1 cut(s) 105
BmiI GGNNCC 2 cut(s) 106, 144
BplI GAGNNNNNCTC 2 cut(s) 8, 40
Bpu14I TTCGAA 1 cut(s) 128
Bsc4I CCNNNNNNNGG 1 cut(s) 153
BseLI CCNNNNNNNGG 1 cut(s) 153
BseMII CTCAG 2 cut(s) 36, 39
BslI CCNNNNNNNGG 1 cut(s) 153
Bsp119I TTCGAA 1 cut(s) 128
BspACI CCGC 2 cut(s) 32, 85
BspCNI CTCAG 2 cut(s) 37, 38
BspLI GGNNCC 2 cut(s) 106, 144
BspT104I TTCGAA 1 cut(s) 128
BsrBI CCGCTC 1 cut(s) 85
BstBI TTCGAA 1 cut(s) 128
BstDEI CTNAG 2 cut(s) 25, 45
BstMWI GCNNNNNNNGC 1 cut(s) 172
Cfr13I GGNCC 1 cut(s) 105
CviJI RGCY 1 cut(s) 29
CviKI_1 RGCY 1 cut(s) 29
DdeI CTNAG 2 cut(s) 25, 45
EciI GGCGGA 1 cut(s) 21
Eco32I GATATC 1 cut(s) 42
Eco47I GGWCC 1 cut(s) 105
EcoRI GAATTC 1 cut(s) 88
EcoRV GATATC 1 cut(s) 42
FaiI YATR 1 cut(s) 60
Hpy188I TCNGA 1 cut(s) 46
HpyF10VI GCNNNNNNNGC 1 cut(s) 172
HpyF3I CTNAG 2 cut(s) 25, 45
LmnI GCTCC 2 cut(s) 34, 82
LpnPI CCDG 1 cut(s) 136
MbiI CCGCTC 1 cut(s) 85
MluCI AATT 1 cut(s) 88
MnlI CCTC 1 cut(s) 107
MwoI GCNNNNNNNGC 1 cut(s) 172
NlaIV GGNNCC 2 cut(s) 106, 144
NspV TTCGAA 1 cut(s) 128
PflMI CCANNNNNTGG 1 cut(s) 153
PspN4I GGNNCC 2 cut(s) 106, 144
PspPI GGNCC 1 cut(s) 105
Sau96I GGNCC 1 cut(s) 105
SetI ASST 3 cut(s) 31, 118, 141
SfuI TTCGAA 1 cut(s) 128
SgeI CNNG 6 cut(s) 49, 65, 105, 115, 121, 163
SinI GGWCC 1 cut(s) 105
Sse9I AATT 1 cut(s) 88
SsiI CCGC 2 cut(s) 32, 85
TaqI TCGA 1 cut(s) 128
TasI AATT 1 cut(s) 88
Van91I CCANNNNNTGG 1 cut(s) 153
VpaK11BI GGWCC 1 cut(s) 105
XapI RAATTY 1 cut(s) 88
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.